Ll_transcript_288444

• Id Trinity: TRINITY_DN51394_c0_g1_i3
• Name Transcript: Ll_transcript_288444
• Sequence: GGCAAGGGTATAGAGGGCGTGCGTTATCAAAAGGAACTATCATGATTCTTATATTTTGGGTTTCTATAAGCTTTTCTTAAAAAGTTGCTTGTTGTGTCTG TGGCTAAGCTACACTCTGTCATCAAAAGTTGGGAATCCCAAAAGCGTTTTCATACCACTGTTTTTTTCCTCTTCTTCTTGCCATTTACAAAGCCATTTTT TCAGAAATCTTTACTACAAATTCTATCCACTTCTGTGTTTTTCTCTTGCCACGATAAAAAAACCATTTTTATTCTCTCTCCCGCTTTTTACATGTCCTCT GTAGTGCACCTAGAATAATATAATATGCTCCTCAATTTACCCCTAGTAGCTTTGTATTCACCACTTTACCAATTTATATTGTGAGAGACAATTTGTATGA GATGGATAATAGAGATAGAAAGCAAGTGGAAGTGGATAAGAGAGAGAGGAAAATAAGAAATGGGGTTGTTGTTTTGAAGAAGGAGGAGAACTGATATTTC TTTTTCGCGTTGAAGATAAAAAGATAGATCCCATAGGAAACTACTTAAAAGCAAAGCTATAACCTTTGTTGATATTAGTGTTTGTAAAAAGTTAGTTTTG ATTGTTTTGCAAACCCTTGAAAATACGAATTTGTCTATACTGAGCTGTTCTCTTCTTATCTCCCCATACCACTCACATTTCGTTTTCTGCTTGTGGGGGC TCATAGCATGAGGAACATCACAGGTGTAAGTTTCACATACATGAAAGTTAACTAACCCAAAAAAGCTACCTCAGATAAGATTCACATGACATTTTCTTCT TCTCTTCTTTTCTCTTTTCATTTAATTCATTCAAACCCACAAACCAAAATTCCAACTTTAAACTTGAAACTGTGACCCTTTGAAGCAAAGTAAAGAAAAA CTCCTTTTTTTATAACTGGATTATTATATTGAGCTGGAGCCACTTCCAATTATATCACTCCGGAAATGAGAGCTGGACTAAGCACAATCCAACAAACGCT AACGCCGGAAGCAGCAAATGTTCTCAACCAGTCAATCACGGAGGCTGGTCGCCGGAACCATAGTCAAACGACGCCGCTTCACGTGGCGGCGACACTTCTG TCATCCCCACCAGGTTACCTCCGTCAAGCGTGCATAAAATCTCACCCCAATTCCTCTCACCCTCTTCAGTGCAGAGCGTTGGAGCTCTGCTTCAGCGTTG CGCTTGAGCGGTTACCAACTTCACAGAACACAAGTCCTTCAACGGAGCCACCAATTTCTAATGCTCTAATGGCTGCGCTGAAGCGCGCACAGGCTCACCA GCGCCGCGGTTACCCGGAGCAGCAGCAACAACCTCTCCTCGCCGTGAAAGTTGAGCTTGAACAGTTAATTATATCGATTCTTGATGATCCCAGTGTTAGC AGGGTTATGAGGGAAGCTAGTTTTTCTAGCCCTGCAGTTAAAACAACTATTGAACATTCATTGAATTTGGCGCCTTCTAATTCGAATCCAATTGGATTGG GGTTCCGGCCAGCAGCGATGACGATGCCTGTGGCGCAGCCACCGGGTCGGAGCTTGTATTTGAACCCGAGGTTGCAACAGGGGAGTGGTGGTTCAGGTTC AGGGGCAGGGCAATTTGGACAGGTACAGAGAGGGGAGGAAGTGAAGAAGGTTGTTGATATATTGATGAGAAGAAACAAGAGGAACCCAATTTTGGTTGGT GAATTAGAGCCAGAGGCTACGGTTAAAGAGGTTTTGAGGAAAATTGAGAATAAGGAGTTGGTAGAAGTGAGTTTTGGTTTTAGCAATGCTTATGTGATTC ATTTGGAGAAGGAGATTCCTTCTGATAGATCACAGATACCAGCGAGGCTGAAGGAATTGGAGGGTTTGATCGAGAGTCGCATCGGGAATTCAGGTGTTTT TGTAGATTTGGGGGACTTGAAATGGTTGGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTGGTTTGGGTAACAAGCAGCAACTGACGGGTGTAGAGGCTGCG AGAACTACGGTTGCCGAGATGGCCAGATTGGTTGCCAAGTTTGGTGAGGGTGGTGCTGGAAAGCTTTGGTTATTAGGTACTGCTACTTGTGAAACTTACT TGAGGTGTCAAGTCTATCATCCTTCCATGGAAAATGATTGGGATCTTCAGGCAGTGCCTATTACTTCCAGAACACCCATGACCGGAATGTTTCCAAGGCT TGGGAACAATGGCATTCTTGGTTCACTTGAGTCTTTGTCTTCATTAAAGGCATTACCAACCACAACAACCACTCCACCTAGGCGTGCCTCTGAGAACATA GCTCCTGCTGAAGTATCAACTTGTTGCCCACAATGTAAGCGGAACTGCGAGCAAGAGGTAGAAGAAATGTTGAAAGAAAATGAGAAATCTGATTCGGAAT CCAAATCAGAGGCAGCTAGTCCTCCTCTACCACAGTGGTTGCAGCATGCTAGAACAAATAATGATAGTGCCAATGTGAAGGATCAGTCACAGAGTAAAAT CAAAGGAGATGTGAAGAAGAGGACACTAGAATTGCAGAAGAAATGGCGTGAGACCTGCTTGAATTTACATCCTAAATTCCATCAGCAAAATGTGAGCACA GAGAGGATTACTCCGACTCCTTTCAACATGACAGGTCTGTACAATGTGAGCTTGATGGGCTGCCAATTTCAACCCAAAATACCGATGAATAAAAATATCA GAACCTCATTGCAATTGAACTCAAATTCAATGCCCATCCAGCCACCACCGGAACCAGTGGTCAGTCTGCAGCAAAACCCGGTAACAACAGAACTGGTCCT TGGGCAAACAATGCCAGCTGATGATGTCCCAGATGAAACACAAGAAAAGCCCATCAATGACTTTTTGGGAGACTTGTCACAAAAGCAAGACAAGTTTGAT GAATTACTGAACAAAAAGCTGCTTGATGCCGATTTTTTCAAGAAGCTACTAAAAGGTCTGACTGCAAAGGTGTGGTGGCAGCATGATGCAGCATCTGCAG TGGCTACAAAAGTGACCCAGTGCAAAGTGGGGAATGGAAAAAGACGCCAACTTGGAACGAAGGGTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAGT TGGCAAGAAGAAGATGGCAACAGCTGTTGCCGAGCTTGTAAATGGGTCCAATCCAACAATAATATCTCTTGCACAATGGAGTGGGGATGGAAACTCTGAT GTTCCTCATCTCCGTGGAAAAACAATCCTTGATCGAATCGCAGAGACTATAAGAAGGAATCCACATTCTATTATCATGCTTGAGGACATTGATGAAGCCA ATATGCTTATTCGTGGCAGCATAAAAAGAGCCATGGAGCAAGGCCGGTTCGCTGATTCATATGGTCGCGAAATCAGTCTCGGCAATGTCCTGTTCATCCT CACTGCAAATTGGTTTCCGGAGGAGCTCAGCTACATGTCAAATGGAAATTCACTAGATGAAGAAAAGCTTGCTAATTTAGCAAAAGGAGGTTGGCAACTT CGGCTATCCGTGGCTAAGAAGGCATCAAAACGAAGACCGAGTTGGTTATCCGGTGAAGACAGATCATCGAAACCAAGAAAAGATACCAATTCAGGCTTAT CATTTGATCTCAATGAAGCTGCTGATGCAGATGAAGAGGACAAGCCAGATGGGTCACTCAATTCTAGTGACCTCACAGTGGACCATGAAGACAATCATGT CATTCATAATGAAAGATTACCTTCAATAATTCCACTTGACCTTCTGGATTCTGTAGATGATGCCATTGTCTTCAAGCCTTTGAATTTCAACCACATTCAA TATAATTTCGCTACTACTATCACCAAAAGATTTTCCACCATCATTGGTAACGGAATCTCAATTGAAGTAAAAGAGGAAGCTCTTGAGAAAATTGCTAGTG GAGTGTGGTTAGGCCAAACTAGCATAGATGAATGGATGGAAAAAGTGTTGGTTCCAAGCTTCCACCAGCTCAAGAAGAACTTCAATTCAAGTAGCAAAGA TACCGAGTCTTCCGTGGTGGTTAGGCTCGAAGATGACGGTTACTCCGATGGCCGGAACTCGGAACAGTGGCTACCTTCTACAGTGAGAGTGGTAGCAGAA GAGTATTGAGAGATTGAGTGAAATATTCGTTTTTGATGGTTATGTAAATATACTATTACTTTGGCGGGGAAAAGTCAAAGACCGTTAGTATGAGGGAAAA AACGGTTAGAAATGGCAGTGTCAACATTTTACCTTTTTTATAGAAAGATTATTTAATTTTTGCGTTTATAAACTTTATTATTATTTGTCTTGTAAGCATA GATAAGATATATTTATTAATTAAATGGAGAGTAATTATATTAATAAAATGAGGGCATTCTTATTTTTTCC
• Tissue: pods
• Gene name: LI_gene_184612;
• Additional information: details;

Expression of Ll_transcript_288444

FPKM

• PAB: 3
• PNAB: 0.3
• PS1: 6
• PS2: 1.7
• PS3: 3.1
• PW1: 1.8
• PW2: 2.5
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288444

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 51.11% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 49.54% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453997.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;