Ll_transcript_288446

• Id Trinity: TRINITY_DN51394_c0_g1_i4
• Name Transcript: Ll_transcript_288446
• Sequence: GGCAAGGGTATAGAGGGCGTGCGTTATCAAAAGGAACTATCATGATTCTTATATTTTGGGTTTCTATAAGCTTTTCTTAAAAAGTTGCTTGTTGTGTCTG TGGCTAAGCTACACTCTGTCATCAAAAGTTGGGAATCCCAAAAGCGTTTTCATACCACTGTTTTTTTCCTCTTCTTCTTGCCATTTACAAAGCCATTTTT TCAGAAATCTTTACTACAAATTCTATCCACTTCTGTGTTTTTCTCTTGCCACGATAAAAAAACCATTTTTATTCTCTCTCCCGCTTTTTACATGTCCTCT GTAGTGCACCTAGAATAATATAATATGCTCCTCAATTTACCCCTAGTAGCTTTGTATTCACCACTTTACCAATTTATATTGTGAGAGACAATTTGTATGA GATGGATAATAGAGATAGAAAGCAAGTGGAAGTGGATAAGAGAGAGAGGAAAATAAGAAATGGGGTTGTTGTTTTGAAGAAGGAGGAGAACTGATATTTC TTTTTCGCGTTGAAGATAAAAAGATAGATCCCATAGGAAACTACTTAAAAGCAAAGCTATAACCTTTGTTGATATTAGTGTTTGTAAAAAGTTAGTTTTG ATTGTTTTGCAAACCCTTGAAAATACGAATTTGTCTATACTGAGCTGTTCTCTTCTTATCTCCCCATACCACTCACATTTCGTTTTCTGCTTGTGGGGGC TCATAGCATGAGGAACATCACAGGTGTAAGTTTCACATACATGAAAGTTAACTAACCCAAAAAAGCTACCTCAGATAAGATTCACATGACATTTTCTTCT TCTCTTCTTTTCTCTTTTCATTTAATTCATTCAAACCCACAAATCACAAACCAAAAACCAATATTACAACTTTGAACTTGAAACTGCGTTCTTAGAAAGA AAGTAAAAGTAAAACTCCTTTTATTTATTTATTTTGTATAATTGGGTTATTGTGTATTGAGCTTGAGCCAAATCCAATTATCTCACTCCGGAAATGAGAG TCGGACTAAGTACAATCCAACAAACGCTTACGCCGGAGGCGGCGAGCGTTCTTGACAACTCAATCGCGGAGGCTGGCCGCCGAAACCATGGCCAAACGAC GCCGCTTCACGTGGCGGCGATGCTTCTGTCATCCCCATCAGGGTACCTCCGTCAAGCATGCATAAAATCGCATCCCAATTCCTCTCACCCTCTTCAGTGC AGAGCTTTGGAGCTCTGCTTCAGCGTTGCGCTTGAACGGTTACCAACTTCACAGAATACAAGTCCTTCAACGGAGCCACATATTTCGAATGCTTTAATGG CTGCTCTAAAACGTGCCCAGGCTCACCAGCGTCGTGGTTACCCGGAGCAGCAGCAACAACCTCTCCTTGCTGTTAAGGTCGAGCTTGAACAGTTAATTAT ATCGATTCTTGATGATCCCAGTGTTAGCAGGGTTATGAGGGAAGCTAGTTTTTCTAGTCCTGCTGTTAAGGCAATGATCGAACAGTCATTGAATTCGGCA CCTTCTAATTCGAATGGATTGGGGTTTCGGCCTGCTGCGATGACGATGTTGGCAGCGCAGCCACCAGGTAGGAGCTTATATTTGAATCCAAGGTTGCAAC AGGTGATTGGTGGTGCAGGTGCAGGTCCAGGTTCAGGGCAATTGGGGCCGGGGCAAAGAGGCGAGGAAGTAAAAAAAATTGTTGATATATTGTTGAGGAG TAAGAAGAGGAACCCGATCTTAGTGGGTGAATCACAGCCAGAGGCTGCGATAAGAGAGGTTTTAGGGAAAATTGAAAATCAGGAGTTGGGAGAAGCAGGT TTCAGTTTTAGTAATCCTCATGTGATTCATTTGGAGAAGGAGATTCCTACCGACAGAACACAGGTTCCAGCTAGGCTGAAAGAGTTGGGTGATTTGATTG AGGAACGGGTCGGTAAGTCGGGTGTTTTTGTGAATTTGGGTGACTTGAAATGGCTAGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTAATTTGGGTAATAA GCAGCAACTGTCGGCTGTGGAGGCTGGGCGCTCTGCGGTTGCAGAGATGGCGAAATTGGTGGCCAAGTTTGGTGAGTCTGGTGCTGGTAGGCTTTGGTTA TTAGGCACTGCAACTTGTGAGACTTATTTGAGATGTCAGGTTTACCATCCTTCTATGGAGAATGATTGGGATCTTCAGGTTGTGCCAATTACCACCAGAA TACCTATGCCTGGAATGTTTCCAAGGTATTTTTACTTCTGTTTGTTTACTTTTGTCAGTTTGTATCACAATTTTACCCAATATATTGTTTGGACAGAGAT ATTGATTTATGTATATTTGGTTGGTTAATTCAGTAATGCCTGCTGTTTTCATCAAATTTTATCCGAGATAATATAAATTTATTTCTTTTGACTTCTTTGC TCAAGTGATTTTCTTTTATTATCATGTTTGATGGAATGGAATTAGGAATTATTCTTCATAGAATCAATTAGAACTGTAGTTTTGGAGAATCTTATCCGAT ATGTTACTTCTGTTCTCGGGAACACATATTCCATTTTCAATGTAATATAGTGTGTCATGTTCCTGTTTCCACTGACAATATTAACCACTGGAGGATATTT AGGCTCAGGAATATGTTTATTCTGTCCAGCGTGTGGTGTTATCTTGTGATTATTTTATTTTATTTATAATCAGGCTTGGGAATAATGGCATCATTGGTAC CTCACTTGAGTCTTTGTCCCCATTAAAGGCATTCTCAACTGCAGCAACCACTCCATCTAGGCATGCTTCTGAGAACATAGCTCCTACTGTAGAGTCAACT TGTTGTCCGCAATGTATGTGGAACTGCGAGCAAGAAATAGCAGAGATGTTAAAAGAAAATGAGAAATCCGATTCTGAATCCAAATCACAGGCAACTTGTC CGCCTCTTCCACAGTGGTTGCAGGTTGCTAGAACTAATAATGATAATGCCAAAGTAAAGGATCAGTCTCAGAGTAAAAGCCAAGATGTGAAAAAGAGGAC TCAAGAATTGCAGAAGAAGTGGCATGATACCTGCTTAAATATACATCCTAAATTTCAACAACAAAACATGAGCTCAGATAGGATTACTTCGACTTCATTC AACATGACTGGCCTGTACAATGTGAGTTTGATGAGGGGCCAAATTCAACCCAAAATACCTCCGAATAAAAATCTTGAAACCTCATTGCAATTGAGCACAA ACTCGATTCCAGCCCAACCACTACCGGAACCAGTGATCAGTCTGCGACAAAATCCGGTAACAACAGAACTGGTCCTTGGGCAAACAAAGCCAGCTGATAG CATCCCAGAAGGAACACAAGATCAACCCATCAATGACTTGTTGGGCTGTTTGTCACAACAGAACGACAAGTTTGATGAATTACAGAACAAAAAGCTACTT CATGCTGATTCTTTCAAGAAGCTACTCAAAGGTCTGACTGAAAAGGTGTGGTGGCAGCATGATGCAGCATCTGCAGTGGCTACAAAAGTGACCCAGTGCA AAGTGGGGAATGGAAAAAGACGCCAACTTGGAACGAAGGGTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAATTGGCAAGCAGAAGATGGCAGCAGC TGTTGCTGAGCTGGTAAATGGGTCCAATCCAACAATAATATCTCTTGCACAATGGCATGGAGATGGTGACTCTGATGTTCCTCATATCCGTGGGAAAACA GTTCTTGATCGAATCGTAGAGGCTATAAGAAGGAACCCACATTCTATCGTCCTGCTTGAGGACATCGATGAAGCCAATAGCCTTATTCGTGGAAGCATAA AAAGAGCCATGGAGCAAGGCCGGTTCCCTGATTCTCATGGCCGTGAAATTAGTCTCGGGAATGTAATTTTTATCCTAACTGCAAATTGGTTGCCAGAGGA TCTCAGGTACTTGTCAAATGGGAATTCACCCGTTGAAGAAAAGGTTGCAAATTTAGCAAAAGGAGGTTGGCAACTTAGGTTATCAGTGGCTAAGAAGGCA TCGAAGCGAAGATCGGGTTGGTTATCTAGTGAAGACAGATCAGTGAAACCAAGAAAAGAGATGAATTCAGGATTATCATTTGATCTCAATGAAGCTGCTG ATGCAAATGAAGAGGACAAAGCAGATGGGTCACTAAATTCAAGTGACCTCACAGTTGATCATGAGGACAATCATGTCATTCATAATAATCGCTCGACCTC AATAATTCCACGTGACCTTCTGGATTCTGTAGATGATGCCATTGTCTTCAAGCCTTTGAATTTCGACTTCATTCGTCGCAATTTTGGCACAACCATAACC AAAAGGTTTTCCACTGTGGTTGGAAACAGAATCTCAATTGAAGTAAAAGAAGAAGCTCTTGAGAAAATTGCTAGTGGAATGTGGTTAGGCCAAACTAACA TAGATGAATGGATGGAGAGAGTGTTGGTTCCTAGCTTCCACAAACTGAAGAAGAATTTCAATTCAAACACCAATCACATTGAGTCTTCTATGGTGGTTAG GCTTGAAGGTGATGGCTACTCCGATCGCCGGATCCGGGAAGAGTGGCTACCTGCTACGGTGAGAGTGGTGGCAGAAGAGTATTGAGGATCAAGTGAGAAT ATTCGTTTTTGGTTACAGAAATGTAAATAGACCACTTTGGCGGGGAAGGTAAAAGACCGTTAGTAGAAAAAGAAAAACCGTTAGAAGTGAAAGGACTAGG GCCGTGTCCACATTTTACCTTTTTTTCTTAGACAAAAAATAATTAATTTTTCCGTTTATAAAACCTTTTTTTGTAAGCATAGGTATAATTATTAATTATA TGGACAATGATATTTCTAAAATGAGGGTATTCTTATATTCTGTCTCCTTGATTTCATTTAGTAATCTTACTTAAACCAAAA
• Tissue: pods
• Gene name: LI_gene_184612;
• Additional information: details;

Expression of Ll_transcript_288446

FPKM

• PAB: 0.6
• PNAB: 0.2
• PS1: 0.5
• PS2: 0.1
• PS3: 0.1
• PW1: 0.4
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288446

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 43.74% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 61.08% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464265.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;