Ll_transcript_288448

• Id Trinity: TRINITY_DN51394_c0_g1_i5
• Name Transcript: Ll_transcript_288448
• Sequence: GGCAAGGGTATAGAGGGCGTGCGTTATCAAAAGGAACTATCATGATTCTTATATTTTGGGTTTCTATAAGCTTTTCTTAAAAAGTTGCTTGTTGTGTCTG TGGCTAAGCTACACTCTGTCATCAAAAGTTGGGAATCCCAAAAGCGTTTTCATACCACTGTTTTTTTCCTCTTCTTCTTGCCATTTACAAAGCCATTTTT TCAGAAATCTTTACTACAAATTCTATCCACTTCTGTGTTTTTCTCTTGCCACGATAAAAAAACCATTTTTATTCTCTCTCCCGCTTTTTACATGTCCTCT GTAGTGCACCTAGAATAATATAATATGCTCCTCAATTTACCCCTAGTAGCTTTGTATTCACCACTTTACCAATTTATATTGTGAGAGACAATTTGTATGA GATGGATAATAGAGATAGAAAGCAAGTGGAAGTGGATAAGAGAGAGAGGAAAATAAGAAATGGGGTTGTTGTTTTGAAGAAGGAGGAGAACTGATATTTC TTTTTCGCGTTGAAGATAAAAAGATAGATCCCATAGGAAACTACTTAAAAGCAAAGCTATAACCTTTGTTGATATTAGTGTTTGTAAAAAGTTAGTTTTG ATTGTTTTGCAAACCCTTGAAAATACGAATTTGTCTATACTGAGCTGTTCTCTTCTTATCTCCCCATACCACTCACATTTCGTTTTCTGCTTGTGGGGGC TCATAGCATGAGGAACATCACAGGTGTAAGTTTCACATACATGAAAGTTAACTAACCCAAAAAAGCTACCTCAGATAAGATTCACATGACATTTTCTTCT TCTCTTCTTTTCTCTTTTCATTTAATTCATTCAAACCCACAAACCAAAATTCCAACTTTAAACTTGAAACTGTGACCCTTTGAAGCAAAGTAAAGAAAAA CTCCTTTTTTTATAACTGGATTATTATATTGAGCTGGAGCCACTTCCAATTATATCACTCCGGAAATGAGAGCTGGACTAAGCACAATCCAACAAACGCT AACGCCGGAAGCAGCAAATGTTCTCAACCAGTCAATCACGGAGGCTGGTCGCCGGAACCATAGTCAAACGACGCCGCTTCACGTGGCGGCGACACTTCTG TCATCCCCACCAGGTTACCTCCGTCAAGCGTGCATAAAATCTCACCCCAATTCCTCTCACCCTCTTCAGTGCAGAGCGTTGGAGCTCTGTTTCAGTGTTG CGCTTGAACGGTTACCAACTTCACAGAACACAAGCACTTCATCGGAGCCACCGATTTCAAATGCTCTTATGGCTGCTCTGAAGCGCGCTCAGGCTCACCA GCGCCGCGGTTACCCGGATCTGCAGCAACAGCCTCTCCTCGCCGTGAAAGTCGAGCTGGAACAGTTAATTATATCAATTCTTGATGATCCAAGTGTTAGC AGGGTCATGAGGGAAGCTAGTTTTTCTAGTCCTTCTGTGAAAGCCACCATCGAACAGTCCTTGAATTCGGCGCCGTCTAATTCGAGTTCTATTGGGTTGG GGTTTCGGCCGGCTGCGTTGGCCATGCCAGCGGCGCAGCCAATGACTCAGAGCTTGTATTTGAATCCGAGGTTGCAACAGGGGAGTGGTGGTGCAGGACA ATTGGGACAGGTGCAGAGAGGTGATGAAGTGAAAACTGTTGTTGACATATTGATGAGGAGGAAGAAGAGGAACCCGATCTTGGTGGGTGAATCAGAGCCA GAGGCTGCGATCGAAAAGGTGTTGAAAAAAATTGAGAATAAGGAGTTGGGAGAAGCGAGTTTCGGTTTTAGTAATGTTCATGTGATTCATTTGGAGAAGG AGATTCCTTCTGATAGAGCGCAGGTACCAGCGAGGCTCAAGGAATTGGGTGATTTGATTGAAGCACGGGTGGGTAATTCAGGTGTTTTTGTGAATTTGGG TGACTTGAAATGGCTGGTAGAGCAGCCTGTTGGTTTTGGAGTTGGTGGTTTGGATAATAAACAGCAAATGTCGGCGGTGGAGGCCGGTCGCGCGGCAGTT GCAGAGATGGCAAGATTGGTTGCCAAGTTTGGCGAGGGTGGTGCTGGAAGGCTTTGGCTTTTAGGTACTGCTACTTGTGAGACTTACTTGAGGTGTCAGG TCTATCATCCTTCCATGGAAAATGATTGGGATCTTCAGGCTGTGCCAATTACCACCAGAGCACCTCTGCCTGGAACGTTTCCAAGACTTGGGACCAACAG CATTCTCGGCACCTCATTTGAGTCTCTGTCCCCATTAAAGGCTTTCCCAACTACAACAATCACTCCATCTAGGTGTGCCTCAGAGAATATAGCTCCTACT CCTGCTGGAGTATCAACTTGTTGCCCACAATGTATGAGGAACTGTGAACAAGAAATAACCGAAATGTTGAAAGAAAATGAGAAATCTGATTCCGAATCCC AATCAGATGCAGCCTGTCCACCTCTTCCACGGTGGTTGCAGGTTGCTAAAGTCAAATATCAGTCTCAGAGTAAAAGCCAAGAAGATGTGAAGCAGAGGAC TCATGAATTGCAGAAGAAATGGCATGATACCTGCATGAATTTACATCCTAAATTTCATGAGCGAAATGTGAGCACAGAGAGGATTACTCCAACTTCTTTT AACATCACAGGCCTGTACGGGCGACCTTTCCAACCAAAAATACCTCTGAACAAAAATCTTGAAACCTCTCTGCAATTGAGCTCAAATTCAATGCCTATCT TGTCACCACTGGAACCAGTGGCCAACTTACCACCAAGTCCAGTAACAACAGAGCTGGTACTTGGGCAAAAAAAGCCAGTAGATACCATTCCAGAAGAAAC ACAAGAACAGCCCATCAATGACTTGTTGGGCTGCTTGTCACAAAAGCAAGACAGCTTTGGTGAATTACAGAACGAAAAGATACTTGATGCCGATTCTTTC AAGAAGCTACTCAAAGGTCTGACTAAAAAGGTGTGGTGGCAGCACGATGCAGCATCTGCAGTGGCTACCACTGTGACCCAATGTAAAGTGGGGAATGGAA AAAGACACCAACTTGGAACAAAGGGTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAGTTGGCAAGAAGAAGATGGCAACAGCTGTTGCCGAGCTTGT AAATGGGTCCAATCCAACAATAATATCTCTTGCACAATGGAGTGGGGATGGAAACTCTGATGTTCCTCATCTCCGTGGAAAAACAATCCTTGATCGAATC GCAGAGACTATAAGAAGGAATCCACATTCTATTATCATGCTTGAGGACATTGATGAAGCCAATATGCTTATTCGTGGCAGCATAAAAAGAGCCATGGAGC AAGGCCGGTTCGCTGATTCATATGGTCGCGAAATCAGTCTCGGCAATGTCCTGTTCATCCTCACTGCAAATTGGTTTCCGGAGGAGCTCAGCTACATGTC AAATGGAAATTCACTAGATGAAGAAAAGCTTGCTAATTTAGCAAAAGGAGGTTGGCAACTTCGGCTATCCGTGGCTAAGAAGGCATCAAAACGAAGACCG AGTTGGTTATCCGGTGAAGACAGATCATCGAAACCAAGAAAAGATACCAATTCAGGCTTATCATTTGATCTCAATGAAGCTGCTGATGCAGATGAAGAGG ACAAGCCAGATGGGTCACTCAATTCTAGTGACCTCACAGTGGACCATGAAGACAATCATGTCATTCATAATGAAAGATTACCTTCAATAATTCCACTTGA CCTTCTGGATTCTGTAGATGATGCCATTGTCTTCAAGCCTTTGAATTTCAACCACATTCAATATAATTTCGCTACTACTATCACCAAAAGATTTTCCACC ATCATTGGTAACGGAATCTCAATTGAAGTAAAAGAGGAAGCTCTTGAGAAAATTGCTAGTGGAGTGTGGTTAGGCCAAACTAGCATAGATGAATGGATGG AAAAAGTGTTGGTTCCAAGCTTCCACCAGCTCAAGAAGAACTTCAATTCAAGTAGCAAAGATACCGAGTCTTCCGTGGTGGTTAGGCTCGAAGATGACGG TTACTCCGATGGCCGGAACTCGGAACAGTGGCTACCTTCTACAGTGAGAGTGGTAGCAGAAGAGTATTGAGAGATTGAGTGAAATATTCGTTTTTGATGG TTATGTAAATATACTATTACTTTGGCGGGGAAAAGTCAAAGACCGTTAGTATGAGGGAAAAAACGGTTAGAAATGGCAGTGTCAACATTTTACCTTTTTT ATAGAAAGATTATTTAATTTTTGCGTTTATAAACTTTATTATTATTTGTCTTGTAAGCATAGATAAGATATATTTATTAATTAAATGGAGAGTAATTATA TTAATAAAATGAGGGCATTCTTATTTTTTCC
• Tissue: pods
• Gene name: LI_gene_184612;
• Additional information: details;

Expression of Ll_transcript_288448

FPKM

• PAB: 0.5
• PNAB: 0
• PS1: 0
• PS2: 0.3
• PS3: 0
• PW1: 0.1
• PW2: 0.9
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288448

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 52.25% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 51.78% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442195.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;