Ll_transcript_288449

• Id Trinity: TRINITY_DN51394_c0_g1_i6
• Name Transcript: Ll_transcript_288449
• Sequence: AAATAAACCATTTTTTATTCTCTCTCGCGCTTTTTACTTGTTCCACTCTGCAGTGCACCGATAACTAGAATAGTCCTACCATATTATACTCTTAAAATTA CCTTTGCTTACTTGTAAAAAAAAATAAAAAAGGTGGTAAATTTATATTCACCACTTTACCAATTTATAATGAGGTTATAGAAAGCGAGTAAAAGTGGAGT ACAGAGAGATAGAAGAAATGGGGTTGTTTTAAAATGATGGGATCTAATATTTCGTTTTGGTGTTGAATTCTCATCTCTCTCAAACTAGCTTTTTGGGTGA GGGAGGTTGAAGTTAGAAATTAAAAAGATAGATCCCGTATGAAAGAATTGATGATTGTTTGTGTTTTGTAAGAAGATTGCTTTGATTGTTTCGCCAACCC ATCATATTCCAACCCCTTGAAAATGCGAATTAGTCTATACTTACCTGTTTTCTGCTTATCTAACCATAACACAGAAATTTCATTTTCTGCTTGGTGGGGT TTCATACTTTCATAGTTTGGAATTTGAGAAACATTTCAAGTGCAAGTTTCACACACATAAAGTCAAGTCACCCCAAAAAAGCTAGTTCAGATAAGATTCA TATTAAACTTCCTTAATCTCTTTTCTCTGTTTTCATTTAATTCATTCAAACCCATAAACCACAAAACCAACTCAAAATTCCAAGTTGAAACCAGAAACTG CGACCCTTTTGAAAGAAAGCAAAGAAAAACTCATCCTTTTGAAACTGTGTTATATAACTTCTATTGAATTGAGCTGGAGCCACATCAAATTATCTCACTC CGGAAATGAGAGCCGGATTAAGCACAATCCAACAAACTCTAACGCCGGATGCGGCCACCGTTCTCAACCACTCAATCGCCGAGGCAGGTCGCCGGAACCA CGGCCAAACGACGCCGCTACACGTGGCGGCGACGCTTCTGTCTTCCCCATCTGGGTACTTACGACAAGCATGCATAAAATCACACCCCAATTCCTCTCAC CCTCTTCAGTGCAGAGCGTTGGAGCTCTGCTTCAGCGTTGCGCTTGAGCGGTTACCAACTTCACAGAACACAAGTCCTTCAACGGAGCCACCAATTTCTA ATGCTCTAATGGCTGCGCTGAAGCGCGCACAGGCTCACCAGCGCCGCGGTTACCCGGAGCAGCAGCAACAACCTCTCCTCGCCGTGAAAGTTGAGCTTGA ACAGTTAATTATATCGATTCTTGATGATCCCAGTGTTAGCAGGGTTATGAGGGAAGCTAGTTTTTCTAGCCCTGCAGTTAAAACAACTATTGAACATTCA TTGAATTTGGCGCCTTCTAATTCGAATCCAATTGGATTGGGGTTCCGGCCAGCAGCGATGACGATGCCTGTGGCGCAGCCACCGGGTCGGAGCTTGTATT TGAACCCGAGGTTGCAACAGGGGAGTGGTGGTTCAGGTTCAGGGGCAGGGCAATTTGGACAGGTACAGAGAGGGGAGGAAGTGAAGAAGGTTGTTGATAT ATTGATGAGAAGAAACAAGAGGAACCCAATTTTGGTTGGTGAATTAGAGCCAGAGGCTACGGTTAAAGAGGTTTTGAGGAAAATTGAGAATAAGGAGTTG GTAGAAGTGAGTTTTGGTTTTAGCAATGCTTATGTGATTCATTTGGAGAAGGAGATTCCTTCTGATAGATCACAGATACCAGCGAGGCTGAAGGAATTGG AGGGTTTGATCGAGAGTCGCATCGGGAATTCAGGTGTTTTTGTAGATTTGGGGGACTTGAAATGGTTGGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTGG TTTGGGTAACAAGCAGCAACTGACGGGTGTAGAGGCTGCGAGAACTACGGTTGCCGAGATGGCCAGATTGGTTGCCAAGTTTGGTGAGGGTGGTGCTGGA AAGCTTTGGTTATTAGGTACTGCTACTTGTGAAACTTACTTGAGGTGTCAAGTCTATCATCCTTCCATGGAAAATGATTGGGATCTTCAGGCAGTGCCTA TTACTTCCAGAACACCCATGACCGGAATGTTTCCAAGGCTTGGGAACAATGGCATTCTTGGTTCACTTGAGTCTTTGTCTTCATTAAAGGCATTACCAAC CACAACAACCACTCCACCTAGGCGTGCCTCTGAGAACATAGCTCCTGCTGAAGTATCAACTTGTTGCCCACAATGTAAGCGGAACTGCGAGCAAGAGGTA GAAGAAATGTTGAAAGAAAATGAGAAATCTGATTCGGAATCCAAATCAGAGGCAGCTAGTCCTCCTCTACCACAGTGGTTGCAGCATGCTAGAACAAATA ATGATAGTGCCAATGTGAAGGATCAGTCACAGAGTAAAATCAAAGGAGATGTGAAGAAGAGGACACTAGAATTGCAGAAGAAATGGCGTGAGACCTGCTT GAATTTACATCCTAAATTCCATCAGCAAAATGTGAGCACAGAGAGGATTACTCCGACTCCTTTCAACATGACAGGTCTGTACAATGTGAGCTTGATGGGC TGCCAATTTCAACCCAAAATACCGATGAATAAAAATATCAGAACCTCATTGCAATTGAACTCAAATTCAATGCCCATCCAGCCACCACCGGAACCAGTGG TCAGTCTGCAGCAAAACCCGGTAACAACAGAACTGGTCCTTGGGCAAACAATGCCAGCTGATGATGTCCCAGATGAAACACAAGAAAAGCCCATCAATGA CTTTTTGGGAGACTTGTCACAAAAGCAAGACAAGTTTGATGAATTACTGAACAAAAAGCTGCTTGATGCCGATTTTTTCAAGAAGCTACTAAAAGGTCTG ACTGCAAAGGTGTGGTGGCAGCATGATGCAGCATCTGCAGTGGCTACAAAAGTGACCCAGTGCAAAGTGGGGAATGGAAAAAGACGCCAACTTGGAACGA AGGGTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAGTTGGCAAGAAGAAGATGGCAACAGCTGTTGCCGAGCTTGTAAATGGGTCCAATCCAACAAT
• Tissue: pods
• Gene name: LI_gene_184612;
• Additional information: details;

Expression of Ll_transcript_288449

FPKM

• PAB: 1.5
• PNAB: 2.9
• PS1: 8.7
• PS2: 2
• PS3: 3.2
• PW1: 5.9
• PW2: 5.7
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288449

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 52.43% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 50.2% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453997.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;