Ll_transcript_288450

• Id Trinity: TRINITY_DN51394_c0_g1_i7
• Name Transcript: Ll_transcript_288450
• Sequence: GGCAAGGGTATAGAGGGCGTGCGTTATCAAAAGGAACTATCATGATTCTTATATTTTGGGTTTCTATAAGCTTTTCTTAAAAAGTTGCTTGTTGTGTCTG TGGCTAAGCTACACTCTGTCATCAAAAGTTGGGAATCCCAAAAGCGTTTTCATACCACTGTTTTTTTCCTCTTCTTCTTGCCATTTACAAAGCCATTTTT TCAGAAATCTTTACTACAAATTCTATCCACTTCTGTGTTTTTCTCTTGCCACGATAAAAAAACCATTTTTATTCTCTCTCCCGCTTTTTACATGTCCTCT GTAGTGCACCTAGAATAATATAATATGCTCCTCAATTTACCCCTAGTAGCTTTGTATTCACCACTTTACCAATTTATATTGTGAGAGACAATTTGTATGA GATGGATAATAGAGATAGAAAGCAAGTGGAAGTGGATAAGAGAGAGAGGAAAATAAGAAATGGGGTTGTTGTTTTGAAGAAGGAGGAGAACTGATATTTC TTTTTCGCGTTGAAGATAAAAAGATAGATCCCATAGGAAACTACTTAAAAGCAAAGCTATAACCTTTGTTGATATTAGTGTTTGTAAAAAGTTAGTTTTG ATTGTTTTGCAAACCCTTGAAAATACGAATTTGTCTATACTGAGCTGTTCTCTTCTTATCTCCCCATACCACTCACATTTCGTTTTCTGCTTGTGGGGGC TCATAGCATGAGGAACATCACAGGTGTAAGTTTCACATACATGAAAGTTAACTAACCCAAAAAAGCTACCTCAGATAAGATTCACATGACATTTTCTTCT TCTCTTCTTTTCTCTTTTCATTTAATTCATTCAAACCCACAAATCACAAACCAAAAACCAATATTACAACTTTGAACTTGAAACTGCGTTCTTAGAAAGA AAGTAAAAGTAAAACTCCTTTTATTTATTTATTTTGTATAATTGGGTTATTGTGTATTGAGCTTGAGCCAAATCCAATTATCTCACTCCGGAAATGAGAG CCGGATTAAGCACAATCCAACAAACTCTAACGCCGGATGCGGCCACCGTTCTCAACCACTCAATCGCCGAGGCAGGTCGCCGGAACCACGGCCAAACGAC GCCGCTACACGTGGCGGCGACGCTTCTGTCTTCCCCATCTGGGTACTTACGACAAGCATGCATAAAATCACACCCCAATTCCTCTCACCCTCTTCAGTGC AGAGCGTTGGAGCTCTGCTTCAGCGTTGCGCTTGAGCGGTTACCAACTTCACAGAACACAAGTCCTTCAACGGAGCCACCAATTTCTAATGCTCTAATGG CTGCGCTGAAGCGCGCACAGGCTCACCAGCGCCGCGGTTACCCGGAGCAGCAGCAACAACCTCTCCTCGCCGTGAAAGTTGAGCTTGAACAGTTAATTAT ATCGATTCTTGATGATCCCAGTGTTAGCAGGGTTATGAGGGAAGCTAGTTTTTCTAGCCCTGCAGTTAAAACAACTATTGAACATTCATTGAATTTGGCG CCTTCTAATTCGAATCCAATTGGATTGGGGTTCCGGCCAGCAGCGATGACGATGCCTGTGGCGCAGCCACCGGGTCGGAGCTTGTATTTGAACCCGAGGT TGCAACAGGGGAGTGGTGGTTCAGGTTCAGGGGCAGGGCAATTTGGACAGGTACAGAGAGGGGAGGAAGTGAAGAAGGTTGTTGATATATTGATGAGAAG AAACAAGAGGAACCCAATTTTGGTTGGTGAATTAGAGCCAGAGGCTACGGTTAAAGAGGTTTTGAGGAAAATTGAGAATAAGGAGTTGGTAGAAGTGAGT TTTGGTTTTAGCAATGCTTATGTGATTCATTTGGAGAAGGAGATTCCTTCTGATAGATCACAGATACCAGCGAGGCTGAAGGAATTGGAGGGTTTGATCG AGAGTCGCATCGGGAATTCAGGTGTTTTTGTAGATTTGGGGGACTTGAAATGGTTGGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTGGTTTGGGTAACAA GCAGCAACTGACGGGTGTAGAGGCTGCGAGAACTACGGTTGCCGAGATGGCCAGATTGGTTGCCAAGTTTGGTGAGGGTGGTGCTGGAAAGCTTTGGTTA TTAGGTACTGCTACTTGTGAAACTTACTTGAGGTGTCAAGTCTATCATCCTTCCATGGAAAATGATTGGGATCTTCAGGCAGTGCCTATTACTTCCAGAA CACCCATGACCGGAATGTTTCCAAGGCTTGGGAACAATGGCATTCTTGGTTCACTTGAGTCTTTGTCTTCATTAAAGGCATTACCAACCACAACAACCAC TCCACCTAGGCGTGCCTCTGAGAACATAGCTCCTGCTGAAGTATCAACTTGTTGCCCACAATGTAAGCGGAACTGCGAGCAAGAGGTAGAAGAAATGTTG AAAGAAAATGAGAAATCTGATTCGGAATCCAAATCAGAGGCAGCTAGTCCTCCTCTACCACAGTGGTTGCAGCATGCTAGAACAAATAATGATAGTGCCA ATGTGAAGGATCAGTCACAGAGTAAAATCAAAGGAGATGTGAAGAAGAGGACACTAGAATTGCAGAAGAAATGGCGTGAGACCTGCTTGAATTTACATCC TAAATTCCATCAGCAAAATGTGAGCACAGAGAGGATTACTCCGACTCCTTTCAACATGACAGGTCTGTACAATGTGAGCTTGATGGGCTGCCAATTTCAA CCCAAAATACCGATGAATAAAAATATCAGAACCTCATTGCAATTGAACTCAAATTCAATGCCCATCCAGCCACCACCGGAACCAGTGGTCAGTCTGCAGC AAAACCCGGTAACAACAGAACTGGTCCTTGGGCAAACAATGCCAGCTGATGATGTCCCAGATGAAACACAAGAAAAGCCCATCAATGACTTTTTGGGAGA CTTGTCACAAAAGCAAGACAAGTTTGATGAATTACTGAACAAAAAGCTGCTTGATGCCGATTTTTTCAAGAAGCTACTAAAAGGTCTGACTGCAAAGGTG TGGTGGCAGCATGATGCAGCATCTGCAGTGGCTACAAAAGTGACCCAGTGCAAAGTGGGGAATGGAAAAAGACGCCAACTTGGAACGAAGGGTGACATGT GGTTACTGTTCTTGGGTCCTGACAGAGTTGGCAAGAAGAAGATGGCAACAGCTGTTGCCGAGCTTGTAAATGGGTCCAATCCAACAATAATATCTCTTGC ACAATGGAGTGGGGATGGAAACTCTGATGTTCCTCATCTCCGTGGAAAAACAATCCTTGATCGAATCGCAGAGACTATAAGAAGGAATCCACATTCTATT ATCATGCTTGAGGACATTGATGAAGCCAATATGCTTATTCGTGGCAGCATAAAAAGAGCCATGGAGCAAGGCCGGTTCGCTGATTCATATGGTCGCGAAA TCAGTCTCGGCAATGTCCTGTTCATCCTCACTGCAAATTGGTTTCCGGAGGAGCTCAGCTACATGTCAAATGGAAATTCACTAGATGAAGAAAAGCTTGC TAATTTAGCAAAAGGAGGTTGGCAACTTCGGCTATCCGTGGCTAAGAAGGCATCAAAACGAAGACCGAGTTGGTTATCCGGTGAAGACAGATCATCGAAA CCAAGAAAAGATACCAATTCAGGCTTATCATTTGATCTCAATGAAGCTGCTGATGCAGATGAAGAGGACAAGCCAGATGGGTCACTCAATTCTAGTGACC TCACAGTGGACCATGAAGACAATCATGTCATTCATAATGAAAGATTACCTTCAATAATTCCACTTGACCTTCTGGATTCTGTAGATGATGCCATTGTCTT CAAGCCTTTGAATTTCAACCACATTCAATATAATTTCGCTACTACTATCACCAAAAGATTTTCCACCATCATTGGTAACGGAATCTCAATTGAAGTAAAA GAGGAAGCTCTTGAGAAAATTGCTAGTGGAGTGTGGTTAGGCCAAACTAGCATAGATGAATGGATGGAAAAAGTGTTGGTTCCAAGCTTCCACCAGCTCA AGAAGAACTTCAATTCAAGTAGCAAAGATACCGAGTCTTCCGTGGTGGTTAGGCTCGAAGATGACGGTTACTCCGATGGCCGGAACTCGGAACAGTGGCT ACCTTCTACAGTGAGAGTGGTAGCAGAAGAGTATTGAGAGATTGAGTGAAATATTCGTTTTTGATGGTTATGTAAATATACTATTACTTTGGCGGGGAAA AGTCAAAGACCGTTAGTATGAGGGAAAAAACGGTTAGAAATGGCAGTGTCAACATTTTACCTTTTTTATAGAAAGATTATTTAATTTTTGCGTTTATAAA CTTTATTATTATTTGTCTTGTAAGCATAGATAAGATATATTTATTAATTAAATGGAGAGTAATTATATTAATAAAATGAGGGCATTCTTATTTTTTCC
• Tissue: pods
• Gene name: LI_gene_184612;
• Additional information: details;

Expression of Ll_transcript_288450

FPKM

• PAB: 2.6
• PNAB: 6
• PS1: 7.8
• PS2: 2.5
• PS3: 4.6
• PW1: 12.1
• PW2: 6.3
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288450

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 51.2% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 49.63% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453997.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;