Ll_transcript_289960

• Id Trinity: TRINITY_DN51398_c0_g1_i3
• Name Transcript: Ll_transcript_289960
• Sequence: TTAATTTTAGAAATATTTTTATAGGAAATGATGAAATAAGATATGTCATAATTTTATTAAGAGATACTTTATATATTCACAGGAAAGAAAGAATTTTGGT TTGACTAGTTATGTCTAAGATCAAAGCCGACTTATAGAAGAAACTAGAACACAAATGTCTTTTTCATTATTCTATCCATTCATGTTTTGTAAATCCACTT TCACCAATGTCTTGGACATGGATTATCACTATATTCTTGGAGGGGTTCTAGTTTGTAGTTTAACTGTTGTGTATGTTATGTACAATCTTGCAAAAAAGAA GGGTACAAGTTCAAGATCAATACATGTATTAGAAAGCAATGGGTTTGGAAAGACATCAGAAAACGTAACATGCAATGAAGAGATTGAAGGAGGCACAGAT ATCATCATTGTAGGTGCTGGGGTTGCTGGTGCATCCCTTGCTTACACACTTGGAAAGGATGGAAGGAGGGTTCATGTCTTTGAAAGGGACTTGAGTGAAC CTGATAGGATTGTAGGTGAATATCTACAGCCTGGAGGCTATCTGAAGTTACTTGAGTTAGGTCTTGAGGATTGTGTGGAGGAAATTGATGCTCAAGAAAT TTTTGGTTATGCTCTTTGTAAGGGTGGAAAAGATACCAAGCTACCTTATCCCTTACAAAAGTTTAGCTCTAATGTTTCTGGTAGAGGCTTTCACAATGGT CGTTTCATACAAAGAATGAGAGAAAAGGCTGCATCTCTTCAAAATGTAAAATTAGAACAAGGAACTGTCACATCTCTACTTAAAGAAAATGGAACCATCA AAGGGGTGAACTACAAAACCAAGAGTGGGCAAGAGTTCACAGCAAAAGCTCCCCTCACCATAGTATGTGATGGTTGTTTTTCCAACTTGAGGAGTTCTCT TTGCAACCCTAAGGTTGAAGTACCCTCTCATTTTGTTGGTCTGGTCCTGGAGAATTGTAATCTTCCATATGCAAACTATGGACAGGTTATCGTGGGTGAT CCTTCGCCCATTGTGTTTTATCCCATTAGCAGCACTGAGATTCGGTGTTTGGTAGATGTGCCTGGCCAAAAATTACCTTCCCTTGGCAATGGTGAAATGG CGCAGTATTTGAAAACTGTGGTAGCTCCCCAGGTTCCACCAGAGCTGTATAGTTCTTTTAATGCAGCAGTTGATAATGGAAACATCAGAACCATGCCAAA TAGAAGCATGCCTGCCTCACCTTATCCCACACCTGGTGCCCTTCTGATGGGAGACGCCTTCAATATGCGTCATCCTTTAACAGGAGGAGGAATGACCGTG ACTTTGTCTGACGTTGTTGTGCTAAGGGATCTACTTAAACCTGTGCATGATTTTCATGATGCTTCTGCTCTTTGCAAATACCTTGAATCATTCTACACCC TGCGCAAGCCAGTGGCATCTACAATAAACACATTAGCTGATGCCTTGTACAAGGTGTTTTGTACATCCCCTGACCCAGGTAGGAAGGAAATGCGCCAGGC ATGTTTCGATTATTTGACCCTTGGAGGTGTTTTCTCAGATGGACCAACAGCTCTACTCTCTGGTCTAAATCCTAGTCCGTTGATCATGGTTCTCCATTTC TTCGCGATGGCTGTTTACGGTGTCGGCCGCCTGTTGATACCATTTCCTTCTCCAAAGAAAATGTGGATTGGAGTTAGATTGATTTCAATTGCATCAGGTA TTATTTTCCCCATTATCAAGGCTGAAGGAGTGAGACAAATGTTATTTCCAGCAACTGTGCCAGCATATTACAGAACAACTCCTGTCTATTAGCTTTATTG AACACACATGAATGAAATTCATGGAATATAAATGAAACAGTACTCAGATACTTTGAACCTGTATGTTGTAACAATCCACTATTGTCAAAAAGAATAAGAG AGGGGACTACATTCCATAATAGGAAAAAACGATTTTGTTCATCTACTACCTATATTGTACCCTATTAAGATTTTAAGAAATGTTAATGAATTTGATACAG AAGTTGCCCAAAAGGCCAAAACCAATCTTCCATGCATTAGAAGAAAAAAAAATGTTATGCTTTGTCTTCAAGTTTTTTGGCTGCTTGTATGGTATTGTTG TAATCATATAATGAAACTTGAGCTATTTAATACAAAAAAA
• Tissue: pods
• Gene name: LI_gene_184644;
• Additional information: details;

Expression of Ll_transcript_289960

FPKM

• PAB: 43.7
• PNAB: 4.9
• PS1: 6.1
• PS2: 3.9
• PS3: 9.2
• PW1: 12.5
• PW2: 24.6
• PW3: 32

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289960

• Blastp: Squalene monooxygenase from Panax with 71.21% of identity
• Blastx: Squalene monooxygenase from Panax with 71.21% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423697.1)
• Pfam: FAD binding domain (PF01494.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;