Ll_transcript_381960

• Id Trinity: TRINITY_DN51402_c2_g2_i26
• Name Transcript: Ll_transcript_381960
• Sequence: TCTACTTCAAGCTTTGGCCTGTTTTTTTAATGTTGGATTATTATTACTATTTCTTATCTCTCCATTCCTCGATTTCATCAACATGTTTCAATAGGGTTTC CATTATTTCTCTCACCTCTTTCCCTCTCTACCTTCATTTTCCCATCAATTTTTCAAATTCTTCACTTCTCCACGCTCGATTAGCTTTGTAGCGCATTGAA TTGGTGTTGCATATGCTAGAAAATGGCCCATACCAATTGAAGAAGCGAACAAGATTCGATGAAGTGTAGTTTTTGGAGGGTATTCTTAGAATAACACTCT TAATTAAGGGATTTTGAGTGGAAGCATGGATTCTGCGAGGGATGGTGTTGTTGTTGCAGGGACAGTGCTTATTCCAATGCGATTTGTGTGGCCATATGGG GGAAGAAGTGTTTATCTCAGTGGTTCTTTTACACGGTGGTCTGAGCTTCTACAAATGTCTCCGGTCGAAGGTTGCCCATCTGTGTTTCAAGTAATTCATA GTTTGGCTCCTGGTTATCACCAGTATAAGTTTTATGTTGATGGAGAATGGCGACATGATGAGCATCAACCTTATATGTCAGGAGAATTCGGAATAGTTAA CACTGTTTTATTAGCTACTGATCCTAATTTCATACCCTCTTTACCTCCGGACATAGCTTCTGGATCTAACATGGATGTGGACAATGAGGTTTTTCGCCGT GTGGTCCGGTTGACAGATGTTTCACTGAGTGATGTGTTGCCGAGAATATCAGATGTTGATTTACAAATGTCTCGTCAGCGTATTTCTGCATTCCTGTCTA TGCGCACAGCTTATGAATTACTTCCCGAGTCAGGAAAGGTTGTTGCCTTAGATGTTGATCTGCCAGTCAAGCAGGCATTTCACATTCTACATGAGCAGGG AATTCCCGTGGCTCCTCTTTGGGACTTCTGCAAGGGGCAGTTTGTTGGAGTTCTCAGTGCTTTGGATTTTATTTTAATTTTAAAAGAGATCGGGAATCAT GGGTCCAATCTGACAGAAGAGGAGCTTGAAACACATACTGTATCAGCTTGGAAAGAAGGGAAAACTTACCTAAATAGACAAAACAATGGACATAGAACAG CATTTTCAAGGCCTTTTATTCATGTAAGTTAATAAGTTAATATATGGCTCTTTATAGCGCCTTTGCTCCTTAATATGTGATAATGTATGTAATTATACTA ACAGGTTTTGGTTTGTAAAGTATATATGAGAATGCTTAATTTTTAAGCTGTTTAATGAGTAGGTTGAGATAAATAGAACTCTGGGAGTGTATATTTTTAA TCTTCTGATAAGTTCAATCTAGAAAGTGAGAAACGCTCATGTGCTTTTGCCTCAGGCGGAGAAGATACTCCTAGGGTTATTTATGAAACTTTGCCCATCA ACTATCCCATTTTTGTCTTACTGTGCTCAATGTGTGAGTGTTCAGGGAAGTGATTGTAATTGTTATACAGTGACATCTGTGTTGGTTATTTTTATTTATC ATGCAGGCTGGGCCATATGAAAATTTGAAAGATGTTGCTATGAAAATACTTCAAAATGAGGTTTCAACAGTCCCTATTGTCCATTCATCTTCTGAAGATG GTTCATTTCCACAGCTACTACATCTTGCTTCACTCTCAGGAATACTTAAATGTATTTCAGGCATTGCTCTAGTTCGTTGCCTATACTTCAACTTCCAATT TGTGCAATTCCTGTTGGCACATGGGTGCCCAAAATTGGGGAGTCAAATCGTCCACCTTTAGCAATGTTGAGACCAAGTGCTCCACTTGCTTCAGCCCTAA ACTTATTAGTTCAAGCTCAAGTGAGTTCAATACCAATAGTTGATGATACTGATACATTACTGGATATATACTGTCGGAGTGATATAACCGCTTTGGCAAA GGACAGAGCTTATACACACATGAATCTTGATGGGATGACTGTTCATCAGGTATGTTTCATTTTTTCCATTCCAATAAAATTCCATTGAGATTTGAGTATC TCTTGCATTCTTTTGTTTGTCCAGGCATTGCAGTTGGGCCAGGATTCTTATGATCCTTATGAGCTGAGAAGTCAAAGATGTCAGATGTGTTTGCGATCTG ATTCTCTCCATAAAGTGATGGAACGTTTGGCAAATCCAGGTAGCCTGGCTTTCCCTTTTTGATGAAAGTGGCTTCCATTTTCCTTTTCTATGTAACTATG TGATAGATTTTTATTCATTCTTGGTTAATTTTGGTAACTTTTCATTTAGCCGTTTTGTCCTGAGTTAACCTTTTCAGTTCTCTTGATTTATCTTTCCTGT GCTGATTGAAGACAGTCTTATACACACTTACTCCTTACTTTCCAATGAATATGGGTGTATTCTTTTTCTTGGTTAGGATGTGTTCTGTTGTTGTATCATT TCTGGATGTCATTATTTAAGAAAGTGAGCCCAATTTCCCGCCTTCAAGCCTGTTTGCCACTCTCAACTTTCCGTAGGATTTCATCTGCCATTCTAAAAAT GGACCCCCAGAATACTTGAGTTTGCAACTATTGATGTGAAAAGGTGTCACACTGTGGATGTGTTATTCTCTGCTTTTAAAATTTACAAGCAAATGAAGTT TGACTTAAAAACTGTACTTTATGTTGCAGAAGTCCTTTTGTTTATTTGGCTTAGCAATAGCTCTAGTTGTCCTGAATATCCAATCCAATTAACTTCGTTT TGTGCTGTAACCTGGAATCAGGTGTGAGGCGAATTGTAATTGTGGAAGCTGGCAGCAAGCGTGTAGAAGGCATCATTTCACTGAGTGACATATTTAAGTT CTTCCTTGGTTGATTGGTGACAGAAGAAGTTCAACTGTTAGTGATGCAGAGGTTATGACAATGCTTCTGCATATAATAACCAGACAACCATCATCAGTCG AGCCAAGTAAGGAGATTCCAGAGCTGCTGCTTTTTTACACGACCGCAATTTCATCTTGTTTCATTGAAATTGAAAAGCCATTACATTGGCCTCTTGTTCC TCCGTTGCCTTGTTTAAGATTTTAGGCTGGAGAATTTGAGGCCTGTAAATTGAGTCTCTGACTGCCTCAAATTTATTAATCTCCCTTCCCTCACCTCCCC ATTCATGTTTTCTTGATAATCATCATATAGATAAATAGAGATACAGGTGCATAGCTGTATCGTTCTATTATATACTGAAGATGCAAACTCTGGGATTTTT TTCATGGGAAGACAGATATTTGAAATACTATTGTGTTTATTGACAAATAAGCGAAACCCATGTTGTTTAATCTTTTCTTTAGAGGAAAAGCCTAGCGTTA ACTTTTGCTAGCGTCAATTTTCTGGTTAGATTGAATGCGGAGAATGAAAAGAAAACGATGTAGGAATCATCTATGGGCTTGTCTATTTTTCTTTTGGTGA AGAGAACTATTTATTCAATGATTGATAAATGCTGCAAATATTGAAAATAAGAAAAGTGTTAAAG
• Tissue: pods
• Gene name: LI_gene_184687;
• Additional information: details;

Expression of Ll_transcript_381960

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.3
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381960

• Blastp: Sucrose nonfermenting 4-like protein from Arabidopsis with 64.55% of identity
• Blastx: Sucrose nonfermenting 4-like protein from Arabidopsis with 63.37% of identity
• Eggnog: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517)
• Kegg: Link to kegg annotations (AT1G09020)
• CantataDB: Link to cantataDB annotations (CNT0002298)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464293.1)
• Pfam: Glycogen recognition site of AMP-activated protein kinase (PF16561.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;