| Id Trinity | TRINITY_DN51402_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_381932 |
| Sequence | CTTTGTTCTGTTTGGAATAGAATTTGTGTAGAGGATTTCTGCATCTGTCGAGTAATTTTGCTAAAATTATGTTTGATTATGACCATGTAATTGTGCTTAC CTTTATTTTTATATAAAGAAAGTTGTCCTTTGCCTTTACCTTGCTTAATGGGTGATGAATGACTGATAATTTTTTAGCTCTTATTTGGAATTATAACAGT TGTTCTGGAAGTTTCTTACTTTGACAATATTTATATCTTTAACTTCTTGCATGTGAAACTTTTATGAATTTAACAATTTACAGGGAATTCCCGTGGCTCC TCTTTGGGACTTCTGCAAGGGGCAGTTTGTTGGAGTTCTCAGTGCTTTGGATTTTATTTTAATTTTAAAAGAGACTTCAAGTAACTTAGAAAGGCTAATA CACCACATATAGAAGATGTACAACAAATTACAGAACTCTAGCAAAAAGAAAAGAAAGAAAAACTCAATCGGGAATCATGGGTCCAATCTGACAGAAGAGG AGCTTGAAACACATACTGTATCAGCTTGGAAAGAAGGGAAAACTTACCTAAATAGACAAAACAATGGACATAGAACAGCATTTTCAAGGCCTTTTATTCA TGTAAGTTAATAAGTTAATATATGGCTCTTTATAGCGCCTTTGCTCCTTAATATGTGATAATGTATGTAATTATACTAACAGGTTTTGGTTTGTAAAGTA TATATGAGAATGCTTAATTTTTAAGCTGTTTAATGAGTAGGTTGAGATAAATAGAACTCTGGGAGTGTATATTTTTAATCTTCTGATAAGTTCAATCTAG AAAGTGAGAAACGCTCATGTGCTTTTGCCTCAGGCGGAGAAGATACTCCTAGGGTTATTTATGAAACTTTGCCCATCAACTATCCCATTTTTGTCTTACT GTGCTCAATGTGTGAGTGTTCAGGGAAGTGATTGTAATTGTTATACAGTGACATCTGTGTTGGTTATTTTTATTTATCATGCAGGCTGGGCCATATGAAA ATTTGAAAGATGTTGCTATGAAAATACTTCAAAATGAGGTTTCAACAGTCCCTATTGTCCATTCATCTTCTGAAGATGGTTCATTTCCACAGCTACTACA TCTTGCTTCACTCTCAGGAATACTTAAATGTATTTCAGGCATTGCTCTAGTTCGTTGCCTATACTTCAACTTCCAATTTGTGCAATTCCTGTTGGCACAT GGGTGCCCAAAATTGGGGAGTCAAATCGTCCACCTTTAGCAATGTTGAGACCAAGTGCTCCACTTGCTTCAGCCCTAAACTTATTAGTTCAAGCTCAAGT GAGTTCAATACCAATAGTTGATGATACTGATACATTACTGGATATATACTGTCGGAGTGATATAACCGCTTTGGCAAAGGACAGAGCTTATACACACATG AATCTTGATGGGATGACTGTTCATCAGGTATGTTTCATTTTTTCCATTCCAATAAAATTCCATTGAGATTTGAGTATCTCTTGCATTCTTTTGTTTGTCC AGGCATTGCAGTTGGGCCAGGATTCTTATGATCCTTATGAGCTGAGAAGTCAAAGATGTCAGATGTGTTTGCGATCTGATTCTCTCCATAAAGTGATGGA ACGTTTGGCAAATCCAGGATGTGTTCTGTTGTTGTATCATTTCTGGATGTCATTATTTAAGAAAGTGAGCCCAATTTCCCGCCTTCAAGCCTGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_184687; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381932
| Blastp | Sucrose nonfermenting 4-like protein from Arabidopsis with 74.75% of identity |
|---|---|
| Blastx | Sucrose nonfermenting 4-like protein from Arabidopsis with 62.13% of identity |
| Eggnog | Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517) |
| Kegg | Link to kegg annotations (AT1G09020) |
| CantataDB | Link to cantataDB annotations (CNT0002298) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020227815.1) |
| Pfam | CBS domain (PF00571.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |