| Id Trinity | TRINITY_DN51404_c0_g1_i29 |
|---|---|
| Name Transcript | Ll_transcript_380714 |
| Sequence | GCCGTCAAATCCCAGGGCTCAACCCTGGACAAGCAGTGAAAACTATCAAACTGGAGTAGGGTAGGGGCAAAGGGAATTTCCGATGAGCGATGAAATGTGT AGAGATCAGATAGAACACCAACAACGAAAGTAGCTACATTTCCGAAGGCCTAAGTTCTCGCATGCCATTTTCATTTCATTGAACCAAATCAACATTTACA CGCCGCCCATATCTGCGGCAGCTCCGGCCATACATTCCTTCTTCTTTCTCAGTGTCTTTTGGATTGGTGTTGCAGTGTAAATTTGTAGACTGAGAGAGAT TGTAAATTAAGAAAGATGGTGAAGTTGACTATGATTGCTCGTGTTACGGACGGTCTTCCACTAGCTGAAGGACTGGATGATGGTCGTGATATTAAAGATG CTGAATTTTACAAACAGCAAGTAAAGGCCTTGTTTAAGAATCTCTCAAGAGGACATAACGAGGCGTCGAGGATGTCCATTGAAACTGGCCCTTATGTTTT CCATTATATTATAGAAGGACGTGTCTGCTACTTGACAATGTGTGATCGTTCATACCCTAAGAAGCTAGCTTTTCAATATCTTGAAGAGCTCAGGGATGAG TTTGAGCGTGTTAATGGGCCTCAAATTGAAACTGCTGCCAGACCATATGCCTTCATCAAGTTTGACACATTTATGCAGAAAACAAAGAAACTTTACCAGG ATACCCATACTCAGCGCAATATTGCAAAGTTGAATGATGAACTCTATGAAGTCCACCAGATAATGACTCGAAATGTGCAGGAAGTTCTTGGTGTTGGTGA ACAGTTGGACCAGGTCAGCCAAATGTCCAGTCGATTATCATCAGAGTCTCGCATCTATGCTGATAAGGCTAAAGATTTGAATCGTCAGGCTCTGATTCGG AAGTGGGCTCCTGTTGCTATTGTTTTGGGAGTTGTCTTTGTACTTTTCTGGTTCAAAAACAAAATTTGGTGATCAAGCTCACTCACTATATGACATTATA ACCTGGACTTTGCTGTTCTTGCTTCTTGCTTTTCTCACATGATGATGATCCAGATTTGCAGAGATTCCGGGGAACCCGGTATGCATGAATGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_184697; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380714
| Blastp | 25.3 kDa vesicle transport protein from Arabidopsis with 89.45% of identity |
|---|---|
| Blastx | 25.3 kDa vesicle transport protein from Arabidopsis with 89.45% of identity |
| Eggnog | Vesicle-associated membrane protein(COG5143) |
| Kegg | Link to kegg annotations (AT1G11890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454488.1) |
| Pfam | Regulated-SNARE-like domain (PF13774.5) |
| Rfam | SSU_rRNA_archaea (RF01959) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |