Id Trinity | TRINITY_DN51414_c0_g1_i14 |
---|---|
Name Transcript | Ll_transcript_381331 |
Sequence | GAAGAGGTACGCTATCCTTCCCCTAATAATAATATTCTCCTGTTTGGTTACTCATAAATTCTCATACAAAATTTTCCATCTCTTTCTCGATCTCCGCTTA ATCCGTTAAATTCACCTCGATTTTCTCTCCCATTATAATTTGAGGACAACGACTTTCAAATCTCGCAGTTTAATTAACCGTTGAATCTTTACGCCTTTAT ATGATAGCAATTTTTAGATATTGGGTTGTTGAATATCTCTGCATTTGTCATCGGATTCAAACTGTTAGGGTTTGTTAGGGTTTTTTAGGGTTTTCAATCT AATTCGAGGGTCTCATGTTTGATATTTTGTTTCTTTGTTAATGGAAGCGGTGTGTTGTTGATTTTGATAGCTTTATTGAATAATTGTGTTCATTGAATTA ATTAGGTATTTGTTAGGTGATTTTTGATCTTTTCAAACTAGGGTTGATGGCTGATCGGACTTTAGCCGTTGTAAAACCGATTTGGATGAAGCAAGCCGAG GAGGCCAAGATCAAGAGTGAGGCTGAGAAGGATGCGGCAGCAAAAGCTGCTTTTGAGGCTACATTCAAAGGTTTGGAGAAGAATTGTGAAAGGGGAACTG TTTTATCAGACAGTGAATCTGAAGAGTATGAGGATTTGGTGAAGAAGCCGATTGGGCCGGTTGATCCTGCAAAGTGTACTGCTGCGGGTACTGGGATAGC GGGTGGAGCAGCTGGTGCCCCGTCATCATTTACAGTTGTGACCAAGGATGCTGATGAGAGAAAAGTTTCGACTGGGGGTGCGCTGATTAAGGTGAAGGTG GTGCCAGGATTGGGTGTCGGAGGGGCGGAGCATGAAGGTGTTGTGAAGGATATGGGTGATGGGACTTACACTATTACTTATGTGGTGCCCAAGAGAGGGA ATTATATGGTCAATGTTGAGTGTAATGGCAAGCCAATTATGGGTAGCCCATTCCCTGTGTTTTTCAGTGCAGGTAGTAGCAGTGGTGGGCTGCTTGGTTT AACTCCTGCATCTACATTTCCAAATTTGGTTAATCAAAACCAAACGACTATGCCCAACATGCCGAATTATTCTGGGTCTGTTTCAGGGGCATTTCCAGGA TTATTGGGGATGATTCCAGGGATTCTTGCCGGACCTTCTGGGGGTGCTACTTTGCCTGGATTTGGGGCCTCACTAGGGGAGATTTGTCGCGACTACCTTA ATGGGCACTGTGCAAAAGCTGATTGTAAGTTGAATCACCCACAACATAATTTGTTAATGGCTGCCTTAGCTGCAACAACCTCAATGGGAACACTTAGCCA AGCTCCTATGGCGCCTTCTGCTGCTGCAATGGCTGCTGCTCAGGCAATAGTTGCTGCCCAAGCCCTTCAAGCACATGCAGCTCAGTCAGCAAAAGATTCA ACTGCTTCACCCGATAAAGCTAGTAAGGATGACACATTGAAGAAAACTCTTCAAGTTAGTAATCTTAGTCCACTTCTCACATCAGAACAGCTAAAACAGC TCTTTGGCTTCTGTGGCACTGTTATTGAATGTACACTCACTGATTCGAAGCATTTTGCTTATATAGAATACTCAAAACCTGAAGAGGCAACTGCTGCTCT GGCATTAAATAACATAGATGTTGGGGGGCGCCCTTTGAATGTTGAAATGGCGAAATCACTCCCGCAGAAACCATCTCATGTAAATTCTTCACTGGCTTCA TCCTCGATTCCTTTGATGATGCAGCAAGCTGTTGCAATGCAACAAATGCAATTCCAGCAAGCACTTCTTATGCAACAAACTATGAATGCACAGCAAGCTG CTAACAAAGCTGCAACTATGAAATCTGCCACAGATTTAGCAGCAGCCCGGGCGGCAGAAATAAGTAAGAAATTGAAAGCTGATGGAGTTGGAATTGAAGA GAAAGAGACAAAAGAGAAATCCAGATCACCTTCTCCCCCTCGTGGCAGATCTTCACCAAAGTCTAGATCTCCTGTCAGTTACAAGAGAAACCGGAGGTCT CGTTCCTACTCACCTCCTCGCTTCGCTAAGGATCATCGGTCCAGATCACCATTGAGGTTCCATCATCATTCTGACTATGAAAGGGAACGGCGGTCCTATA GAGACATCAGGGAACATAATGATAGAACTAGAAGACATGATTCGTACAGATCACGTGATCATCATTCATTTTCTTATAGAAGAAACAGGAGTAGGAGTGT GAGCCCACATGCAAGGAAATCCTATCGTACCGAGTCTGTTTCTCCAAAACGTCGCACAGAAAGTTCACCTCGTAGAGGAAGGAAACCATCACACGCCGAT TCTGGCTCTCCAGGTCATCGGAGAGGAAGTAGGTCATCTCCAAAGATTGATGAAAGCAAACTAAGAAACAGTAGGCGTTCAAGGTCTATATCATCATATG ATAAGCTTCATTCTTTAGGCAAAAATGAAGAAATCTTGCATGGAAGGTCTAAACATAGAGAAAGAAGGGGGTCGAGGTCAGTATCTGTGGATGAGAAGCG TCACCGGAAGAGCCGATCCTCCCCAAGAAGAGTCGATGAAAGTAGATCCAGGCCCAAGAAGCGATCCAGGTCAAAATCTGTGGATGGTAAGCACCATTTT CCTGAGAAATTGGATGAAAATAGAAACAGAAGACACAGTGATAAAAGGCGCTCCAGGTCAAGATCTACAGAAGATAGGGATCAAACTGATGAAAGAGAGG ATAAAATAAAAAGTGACAAGGCAAAGCGATATGATACTAAAAGGACCAAATCACAATCTTTTGAAGAGAAGCATCATTCTAAAGATAAATCGGGCGAAAA TAAAGAAAAGAAATCAAGGCCCCGGAGGCGTTCGAGGTCAATATCCGTTGAAGAAAGGCATGACAAAGGAGGCTCTTCATCCAATAGAAATTTGGCTGAG AGCAATTCTGAACAGAGACCATTCAGGTCAAAGTCCCCTGAGGGCAAACACTCCAGTGATAAGTATGAAAGTAAAGATGAAAGATCAGGGCATAGAGAGA AAGTCCCATCTAAGTCAAAAGTAAAAAATCATAAACAATGTGTTGGGAGTGGGATCTCCCCAAGAAATTTCAAGGAGTATGAATCACAAGGAATTACACA ATCTTGTTCTGGATCTGCAAAAGGTAAGCATCATTTGAATGATGGAGAAAATGCTAATTGTGAAGAACATTCAGAACTCCATGAAGATGCCATGCAGGAA CCAATTATAAACGTGAGGAGTTCAACCAACCTGAATGGTAATAGGATTTTGATTTCAATGAATGACAAGCGCAACTTAGAAGGATCAACCAAAAATGAAG GAGCTGATGATAGCGCAGAGTGGAGGTCCATCGAAGAAGTGGAAACTGGAAAATATTAAGCCTACTATGCTTGAAGTGGTGATTTAAATGGTTCTAAAGA TTCAACTGGCTTTTGACAATGCTAACAACATAGCTGAGTATAGATTCCTGTTATTTCTTCTTGAATCGGAATAAGCACTGGCAAGATGAGGATAAACAAA GTTACCGTACTCATAAATGCTGATCAGTGAAAGATTTCATCCAAGGCTGATATGATTTCCTGAACAAGTTCTTTTTAGGGAATAGACTGTTTCTTTTTAG GAGAAGCAGAATTCTCAGGAGGCTTCCACTATTTGGTTTGACCCCCAGAACTTCTCTGTTGGCTTATGAACATCTTCGATTTTTTATTTCAGTTTGCAGG TGGTTTATAACCAAGATGGGACATAGAATCTCTGGGGCTGTTGATGTAGCTCAAGGTTTCAAGAATTGTCCTGCTTTTATCATGACCAACATGCAGTGCT TATATCATGACAAACCATGCGGTGCTTATATAATGGTTCTTTTACTGCTTGATTGATGTATGTTGGAATGTTATCTTAAGTATACTATTCTTCTTTTTTT ATTAACATAGTTGTGTTTTGCAATGTTTGGGTCTTGATATCTATATTGATGGAATCTGAATGTTTTTGGTTTCTAGTCCTCCAGAAGTTATGATAGTGAG TTTTATCCACCGTCCTGATTATATATGCATCTAAAACTTTTTGGATCAAGGTTGCAATATTGTTGTGTTAAACTGAACTTTCTACAATGATATTTTAGTT CATCCTCCCTCTTGTCTGTGTTATATATAGATTCTATATACAACTTACAAGCATCATACCTTGATGTGGTCAACCATTGACTCCCTTTTATTTTCTCATA TTTAATCGTACGGTGGGGCTTGTTATACCCAAAACAAATGCAGGTATTCACATTGAAATCATTTGGAGCTTTGAGATACAGTTTCGCAAGGTTGAATTTC TCATGTTAATGAAGGTATGCAGTCAGATTCTGATGCTCTGTGGTTCAGAGCATATCTGTTTTTAATCCATATAGTGTTGAGAGTAATGGGAGTTGCTTTA GTTTGCCAATTTTTTCCTATCATCATCTGGTGTCTTATGCTTTCCTGCATTATTTTTCCTTTTATTCTTTCCTTTTTTTTCCGGAGAAATTGTCATGGTT AGGTAAAGCTTCTCGATAAGGTCGAGTGAACCTGGATGTTGCTGCAATGAGTTGCATGGGGTTGCGTTTGAGCACATTGGCCGAGTTACAGTCTTTACTT AAGTAAAATGGTGAAAAGCAAATGTTGATTTCAACAGGTTGGAAACAGCCTCTTTGTGTCCGAATGTATGAATGCCTACATCTATCTTCTTTAGACCCTA CGTGGCAGCCTCTTGCAATAGCCACACTTCTGGTGAAGCTGTCCAAGTTTGATCTGTGGGAGTTCCTTTGCTTTGTGTTTTAGTTTTCTTAGAGCATCTT CAATGCAGAATGCACTCTTCATTCTTATTTGAACTCTACATATTATTTTATAATTTATTACAACTCCC BLAST |
Tissue | pods |
Gene name | LI_gene_184764; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381331
Blastp | - |
---|---|
Blastx | Polyadenylate-binding protein-interacting protein 8 from Arabidopsis with 31.58% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463292.1) |
Pfam | Filamin/ABP280 repeat (PF00630.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |