Ll_transcript_380333

• Id Trinity: TRINITY_DN51418_c0_g1_i1
• Name Transcript: Ll_transcript_380333
• Sequence: CGAAGTTTGGTTATAGTATTTCATTGAACTTCACTTTGGTAGTACTCAAATAAATGGAGGAGAAGGGTGTCACACAATCAAAATTGGTTTTTGCTGTTAA TGGTGAGAGGTTTGAGCTCTCCAAACTTGATCCTTCTACAACTTTGCTCCAATTCTTGCGTTCTCAAACTCCCTTCAAGAGTGTTAAGCTTGGCTGTGCT GAAGGTCACTGATTCTCTCTTTTTCTGTATTCAAATTTGAACCATTTCTGATTATTACTGTTTTAGTCAGGTGGTTGTGGTGCATGCGTAGTTTTAATCT CCAAATATGATCCAGTGCTAGACAGCGTTGAGGATTTTACAGCGAGTTCTTGTCTCACATTACTTTGCAGCATACATGGGTGTTCCATAACAACAAGTGA AGGCATCGGAAATAGTAAAGATGGGTTCCACCCAATTCATGAAAGACTTGCAGGATTCCATGCCTCACAGTGTGGCTTTTGCACTCCTGGGATGTGTGTT TCACTCTTTGGGACACTCGTCAATGCCGAAAAGACCAACCGTCCAGAGCCACCTCCCGGGTTCTCAAAAGTGACTGTTACTGAGGCTGAAAAGGCTATTG CAGGTAATCTTTGTCGCTGTACAGGTTATCGACCCATTGCTGATGCCTGCAAAAGCTTTGCAGCTGATGTTGATATGGAAGATTTGGGGTTCAACTCTTT TTGGAGAAAGGGAGAGATCAAGGACTTAAAGATTAGTAAATTGCCTCAATTCAACCATAATCACAAGAGTTCTAGATTTCCAGTGTTTTTGAAGGATATC AAGCACGATGGTGTGTTCTTGGCTTCTGAGAAACACAGTTGGCACAGTCCAACTAGTCTAAAGGAGCTTCAAGGCTTATTGGAATTAAGCCAAGCCAATG GAACGCGGATAAAACTGGTTGTTAGTAATACAGGTATGGGATATTACAAAGATAAAGAAGTCTACAATAAGTATATCGATCTTAAGGGAATTTCTGAGCT CTCAAATATCAGAAAGGATCAAACAGGTATTGAAATTGGAGCAGCAGTGACAATATCCAAAGCTATTGAAGCACTAAAGGAACCGTGCAGAAGTGATTCT CTCTTAGAGTTTGTAACGATGCTTGAGAAGATTGCTGATCATATGAACAAAGTTGCCTCAGGGTTTATTCGGAACACAGCCAGTGTTGGTGGAAATTTAG TGATGGCACAAAGGAACTATTTTCCCTCAGATATCGCTACAATACTCCTTGCTGTGGATTCAATGGTTCACATAATGACTGGTACACTGTTTGAGTGGCT TACATTGGAGGATTTTCTAGAAAGAGCACCATTAAGCTTGGAAAGTGTACTTTTAAGCATTAAAATTCCATGTTTGAAACTTAATAAAAGTAAGTCTTTA GAACAAAGAAGTAGATTCCTCTTTGAAACATACCGACCCTCTCCCCGACCTCTTGGAAATGCCCTCCCCTACTTAAATGCTGCATTCCTGGTTGAGGTGT CTCCATGCAAGGATTCTGGTGGGACAATGATAGTCACTTGTAGGCTGTCTTTTGGTGCCTATGGGATTAAACATGCAATCAGAGCAAAAACTGTTGAGGA ATTTTTATCTGGGAAGCTGTTAAATGCTAGGTTTCTATATGAAGCTGTCAAGTTGCTTACGGTCACTATTACACCTGAAGATGGAACCACAAAAGCTGAC TACCGGTCAAGTTTAGCAGCTGCTTTTCTTTTTCAGTTTTTTAACCAATTAATTGACAGTCCTGTGGAAATAATCAATGGCAATTTTAACGGAGATACCA GTATTCCTTTCACTGCTGATTTTGAATTAAAAGAGAAACACAAGCAGGCTCATCTTGACAAAATTCCAACTTTACTTTCATCTGGAAAGCAACTCCTTGA AGCTGGTAGTGAGTATCATCCTGTTGGTGCGCCAATTGTGAAATCTGGAGCTTCACTACAAGCCTCAGGTGAGGCTGTGTTTGTAGATGACATTCCATCA CCTACAAATTGCTTATATGGAGCATATATTTATAGTGAAAAGCCTTTAGCAAGGAT
• Tissue: pods
• Gene name: LI_gene_184795;
• Additional information: details;

Expression of Ll_transcript_380333

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380333

• Blastp: Indole-3-acetaldehyde oxidase from Arabidopsis with 51.33% of identity
• Blastx: Indole-3-acetaldehyde oxidase from Arabidopsis with 55.24% of identity
• Eggnog: xanthine dehydrogenase(COG4630)
• Kegg: Link to kegg annotations (AT5G20960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455868.1)
• Pfam: [2Fe-2S] binding domain (PF01799.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;