Ll_transcript_380344

• Id Trinity: TRINITY_DN51418_c0_g1_i11
• Name Transcript: Ll_transcript_380344
• Sequence: ATGAATTGAGTGAGACATGTTGTATGTTTGAACAAAATTCTGTTATCCTTTCTTGTCTGAAAACATTCGCTGAACTTCACTTTGGAGTTTGGACCTTGCA CTCTTAGAAATGGAGGAGAAGAGTGTGACACCAACAAGTTTGGTTTTTGTTGTTAATGGTAACAGGTTTGAGCTCTCCAAACCTGACCCATCTTCCACTT TGCTCCATTTCTTGCGTTCTCAAACTCCCTTCAAGAGTGTCAAGCTTGGTTGTGCTGAAGGTGGTTGTGGTGCATGTGTTGTTTTGATCTCTAAATATGA TCCAGTGCTTGACAAAGTTGAGGACTTTACAGCAAGTTCATGTCTCACACTACTTTGCAGCATACATGGGTGTTCCATAACAACAAGTGAAGGCATTGGA AATAGTAAAGATGGATTTCACCCAATTCAGGAAAGACTTGCAGGATTCCATGCCTCCCAGTGTGGCTTTTGTACTCCTGGGATGTGTGTTTCACTCTTTG GGACACTTGTCAATGCCAAAAAGACCAACGGCCCAGAGCCACCTCCCGGATTCTCAAAAGTGTCTGCTGCTGAGGCTGAAAAGGGTATTGCCGGTAACCT TTGTCGATGTACTGGTTATCGATCCATTGCTGATGCCTGCAAAAGCTTTGCAGCTGATGTTGATATGGAAGATTTGGGGTTCAATTCTTTTTGGAGAAAG GGAGATAGCAAGGACTCAAAGCTTAGTAAGTTGCCTCAATATGACAGCAATCAAAAGAATAGTAAATTTCCAATGTTTTTGAAGGAAATCAAACGCGACA ATGTGTTCTTGGCTTCTGTGAAACACAGTTGGCACAGTCCTACTAGTCTAAAGGAGCTTCAGATCTTATTGAAATTAAACCAAGCCAATGGACCTCGAAT AAAATTGGTTGTTAGTAATACAGGTATGGGATATTACAAAGATAATGAAGGCTATGATAAATATATCGATCTTAGGGGGATTTTAGAGCTCTCGAAGATC AATAAGGATCAAACAGGTCTTGAAATTGGAGCAGTGGTGGCAATATCTAAAGCAATTGAAGCACTAAAGGAAGCAAGCAGAAGTGATTTTCTCTCGGAGT TTGTGATGATACTTGAGAAGATCGCTGACCATATGAGCAAAGTTGCCTCAGGGTTTATTCGGAACACTGCGAGTGTAGGTGGAAATTTAGTAATGGCACA AAAGAATCATTTTCCCTCAGATATTGCTACAATACTCCTTGCTGTGGATTCAATGGTTCACATAATGACTGGTACACAATTTGAGTGGCTTACATTGGAG GAGTTTCTAGAAAGAGCACCGTTAAGCTTCGATAGTGTACTTTTAAGCATTAAAATTCCAAGTTTGGCACTTACTAAAAGTAAGTCTTCAGAAAAAATAA GTAGATTCCTCTTTGAAACATACCGTGCTTCTCCTCGACCCCTTGGAAATGCCCTTGCCTACTTAAATGCAGCGTTCCTGGTTGAGGTGTCTCCATGCAA GGATTCTGGTGGAACAATGATAGACAATTGTAGGCTGTCTTTTGGTGCCTATGGGACTAAACATGCAATAAGAGCAAAAAATGTTGAAGAAATATTAGCC GGAAAGCTGTTAACTATTAGTATTCTATATGAAGCTGTCAACTTGCTTACAACTACTATTGTACCTGAAGATGGAACCTCAAAATCTGCCTACCGGTCAA GTTTGGCGGCTGCTTTTCTTTTTCAGTTTTTTAGCCCGTTAATTGACAATCCTGCCAAAATAACCTATGGCTATTTAAATGAACATACAAGTGTGCCTTT CATGAAGGATTTTGAATTAAAAGAGAATCATAAGCAGGTTCATCATGACAAAATTCCAACTTTACTGTCATCTGGAAAGCAAGTCATTGAAGCAGGTAGT GAGTATCATCCCGTTGGTGCGCCAATCGTGAAATCTGGAGCTGCGCTACAAGCCTCAGGTGAGACTGTGTATGTAGATGACATTCCATCACCAACAAATT GCCTGTATGGAGCATATATTTATAGCGAAAAGCCTTTAGCAAGGATCCGGAGTATAAAACTCAGGCCTGAATTGCAACTAGATGGAGTGAGGGACATCAT TTCAATTAAAGACATTCCAAATGGTGGGGAGAATATAGGATCTAAGAGTATATTTGGTTCCGAGCCTTTATTTGCAGAAAATATTGCTCAGTGTGTTGGT GATCGTCTTGCCCTTGTGGTTGCAGATACTCAGAAACTAGCAGATATGGCTGCAAACTCGGCTATTGTTGATTATGATATTGAAAATATTGAGTCACCTA TTCTTTCTGTGGAAGAAGCTGTTGAAAGATCTAGCTTTTTTGAAGTTCCTCCTTTTCTCTCCCCAAAACATGTTGGCGATATATCGAAAGGAATGGCTGA AGCAGATCACAGGATTCTTTCTGCCGAGATGAAACTTGGATCTCAATACTATTTCTATTTGGAGACACAAACTGCACTTGCTGTACCAGATGAAGACAGC TGCATTGTTGTTTACAGCTCAAGTCAATGCCCTGAGATTGCACACTCTACTGTAGCAAGATGCCTCGGCATTCCTGAAAATAACGTTCGTATAATTACAA GAAGGGTTGGGGGAGGTTATGGAGGAAAAGCCGTGAAAGCCGTGTCTGTTGCTGTATCGTGTGCAGTTGCAGCACACAAATTAAGCCGGCCTGTCAGGAT TTATCTAAATAGAAAGACAGACATGATAATGGCTGGAGGAAGGCATCCCATGAAGATAATTTACAGTGTTGGATTTAAAAATGATGGGAAGATTACTGCG TTAGAACTTCAGATATTGGTCGATGCCGGGATATATGTGGATGTAAGTGCAATAATGCCGCGAAACATAGTTAGCGCACTTAAAAAGTACGATTGGGGAG CTCTATCTTTTGATATAAAGGTATGCAGAACAAATCGTCCTAGTAGGTCTGCAATGAGGGGCCCTGGGGAGGTGCAGGGGTCCTTTATTGCTGAAGCTGT GATAGAAAATGTTGCAGCTGCACTTTTAATGGATGTAGATTTAGTAAGAAGCATTAATCTTCACACACACAAAAGCCTTCAATCATTCTATGAGGGTGCT GCCGGTGAACCTCATGAGTATACCTTGCCTTCTGTATGGCATAAGTTGGCTGTTTCTGCAAACTTTGAACAGAGAGTTGAACTGGTGAAAGAGTTCAATA AGATTAACACTTGGAAAAAAAGAGGAATTTCTCGAGTACCTGTAGTGTATCAACTGACTCTAAGACCAACTCCCGGAAAAGTTAGTATCTTTTCAGATGG GTCTGTCGTTGTTGAAGTTGGGGGAATCGAATTGGGACAGGGTCTCTGGACGAAGGTGAAACAGATGGCTGCATTTGCTCTCAGTTCAATTCAATGTGAT GGAACTACAGATCTCGTAGACAAAGTACGGGTTGTACAATCTGATACCGTTAGCTTGATTCAAGGGGGATTCACTGCTGGGAGCACTACATCGGAGTCTA GCTGTGAAGCAGTTAGGCTTAGCTGCAATGTCTTGGTTGAGAGGTTAAGGCCACTCAAGGAAAAGCTGCAGAATGAAATAGGCCCTATTAAGTGGGAGTC GCTTATTCTTCAGGTTGCCACTATAAGATAAACATTAATTTTCCTCTTGAGGAGGAAATAGATCTTCTTTAAATTGCTGCAGGCTATACAGTTAAGAGTG CATGGTTTTTCTTTCGCTCATTCGGTAACTGTTAACAAGTTAGGCAGTGCTGAAGTTTAAATTTTGTTCTCTAACCTTAATGGCATAGTTTCTGTTCACC ACTTTGCTTTACAAAGGTTATACACATAAAGCATATTAAAAACACTATTCCAAGACTATAAAATCAGTTCTCTTCAATCTTCATATCCACTTGAAGTTAC TTGAAGGAAGTGGTATTTTAACCATTCTATCTTTTATGATCCATATGGACAAACTATTTATGTTTGAATTTCATTGCTTCTCACTGAAAGGATTATAGAC ATGTCGGTTTTCGAATTCATATTGATGCATGTATCTTGGTACTTCTAATTTTGCATGAGACATATTGCCTCAAGTTTTCATGTTAGAGTCTTTTGCATGC ATCTTAGGGTCTTGCCTCAAGTACTAAACTATGCAAACTGAGTCTAGAGCAGTAAGTTTCTTCTTATTTTCCTAACCCTGAAGCAAAAATATTTATTTAC CATTATGATGTCAATTTATCAACATACAGGCATATATGCAATCTTTGAACTTATCAGCATCTTCATTTTATGTACCAAATGATGATTCCACCAATTACCT TAATTATGGTGCTGCAATAAGCGAGGTGGAAATAGATCTTCTGATTGGAGAAACCAGATTTTTGCAAACAGATATTGTCTATGATTGTGGACAGAGTCTC AACCCTGCTGTGGATTTAGGACAGATTGAAGGAGCTTTTGTTCAAGGGTTGGGTTTTTTCATGCTTGAAGAATATGAAACAAATGGTGATGGTTTGGTGT TAGCAGATGGCACATGGAACTACAAAATTCCTACAATAGACACTATTCCTCAACAGTTTAATGTTCAAATCATTAACAGTGGCCATCACCAGCATCGTGT TCTCTCTTCAAAGGCTTCTGGTGAGCCACCATTACTTTTAGCAGCATCTATTCACTGTGCCACAAGAGCAGCTGTTAAAGAAGCAAGGAAACAGCTAAAT TCATGGAACAAAAGAAAGTCAAATGATGAAAGTGATTCAACATTTGAATTGGAGGTCCCTGCAACTATGGCTGTAGTAAAAGAACTCAGTGGACTAGATA TTGTACAAAGATATCTGGAATGGAAAATGGGCAACAAGTAAAGATCCTCATCATGAAGTCCATCCACTGAGTCATTAACCGGTCCGAGTTTAATAACATC GACTCACTGAATTATATGTCTGAAGAAAAAAGAATTTCTCCTTCTAATAAAATACTAGATAACATATAGAAATATTTGTATTTTTTTAGCAACTAAAATT CTATTTTATTGTCTTAACTTTATGCTATTACATACTTTTTTATGTGACATTCATACTTCAATAATAACCAAGGATGATAAAGAACAACCCATGGTAGTTA ATATTTGTTCGCCCATGAATGTCATAAGTTTACTATGTTGTCTTTTGTACTTTAAATAGGAGTCATGATTTGTTTATCAAGAACAAAGTTGTTTATTCAT AAGGTGTACTATCATCATTACTTTCCGAATATATTATTGTTTTCTTCTTTAAAAA
• Tissue: pods
• Gene name: LI_gene_184795;
• Additional information: details;

Expression of Ll_transcript_380344

FPKM

• PAB: 0.2
• PNAB: 0.6
• PS1: 0.1
• PS2: 0.5
• PS3: 0.1
• PW1: 0.4
• PW2: 0.8
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380344

• Blastp: Indole-3-acetaldehyde oxidase from Arabidopsis with 59.97% of identity
• Blastx: Indole-3-acetaldehyde oxidase from Arabidopsis with 59.71% of identity
• Eggnog: xanthine dehydrogenase(COG4630)
• Kegg: Link to kegg annotations (AT3G43600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434190.1)
• Pfam: 2Fe-2S iron-sulfur cluster binding domain (PF00111.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;