| Id Trinity | TRINITY_DN51418_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_380345 |
| Sequence | CGAAGTTTGGTTATAGTATTTCATTGAACTTCACTTTGGTAGTACTCAAATAAATGGAGGAGAAGGGTGTCACACAATCAAAATTGGTTTTTGCTGTTAA TGGTGAGAGGTTTGAGCTCTCCAAACTTGATCCTTCTACAACTTTGCTCCAATTCTTGCGTTCTCAAACTCCCTTCAAGAGTGTTAAGCTTGGCTGTGCT GAAGGTGGTTGTGGTGCATGCGTAGTTTTAATCTCCAAATATGATCCAGTGCTAGACAGCGTTGAGGATTTTACAGCGAGTTCTTGTCTCACATTACTTT GCAGCATACATGGGTGTTCCATAACAACAAGTGAAGGCATCGGAAATAGTAAAGATGGGTTCCACCCAATTCATGAAAGACTTGCAGGATTCCATGCCTC ACAGTGTGGCTTTTGCACTCCTGGGATGTGTGTTTCACTCTTTGGGACACTCGTCAATGCCGAAAAGACCAACCGTCCAGAGCCACCTCCCGGGTTCTCA AAAGTGACTGTTACTGAGGCTGAAAAGGCTATTGCAGGTAATCTTTGTCGCTGTACAGGTTATCGACCCATTGCTGATGCCTGCAAAAGCTTTGCAGCTG ATGTTGATATGGAAGATTTGGGGTTCAACTCTTTTTGGAGAAAGGGAGAGATCAAGGACTTAAAGATTAGTAAATTGCCTCAATTCAACCATAATCACAA GAGTTCTAGATTTCCAGTGTTTTTGAAGGATATCAAGCACGATGGTGTGTTCTTGGCTTCTGAGAAACACAGTTGGCACAGTCCAACTAGTCTAAAGGAG CTTCAAGGCTTATTGGAATTAAGCCAAGCCAATGGAACGCGGATAAAACTGGTTGTTAGTAATACAGGTATGGGATATTACAAAGATAAAGAAGTCTACA ATAAGTATATCGATCTTAAGGGAATTTCTGAGCTCTCAAATATCAGAAAGGATCAAACAGGTATTGAAATTGGAGCAGCAGTGACAATATCCAAAGCTAT TGAAGCACTAAAGGAACCGTGCAGAAGTGATTCTCTCTTAGAGTTTGTAACGATGCTTGAGAAGATTGCTGATCATATGAACAAAGTTGCCTCAGGGTTT ATTCGGAACACAGCCAGTGTTGGTGGAAATTTAGTGATGGCACAAAGGAACTATTTTCCCTCAGATATCGCTACAATACTCCTTGCTGTGGATTCAATGG TTCACATAATGACTGGTACACTGTTTGAGTGGCTTACATTGGAGGATTTTCTAGAAAGAGCACCATTAAGCTTGGAAAGTGTACTTTTAAGCATTAAAAT TCCATGTTTGAAACTTAATAAAAGTAAGTCTTTAGAACAAAGAAGTAGATTCCTCTTTGAAACATACCGACCCTCTCCCCGACCTCTTGGAAATGCCCTC CCCTACTTAAATGCTGCATTCCTGGTTGAGGTGTCTCCATGCAAGGATTCTGGTGGGACAATGATAGTCACTTGTAGGCTGTCTTTTGGTGCCTATGGGA TTAAACATGCAATCAGAGCAAAAACTGTTGAGGAATTTTTATCTGGGAAGCTGTTAAATGCTAGGTTTCTATATGAAGCTGTCAAGTTGCTTACGGTCAC TATTACACCTGAAGATGGAACCACAAAAGCTGACTACCGGTCAAGTTTAGCAGCTGCTTTTCTTTTTCAGTTTTTTAACCAATTAATTGACAGTCCTGTG GAAATAATCAATGGCAATTTTAACGGAGATACCAGTATTCCTTTCACTGCTGATTTTGAATTAAAAGAGAAACACAAGCAGGCTCATCTTGACAAAATTC CAACTTTACTTTCATCTGGAAAGCAACTCCTTGAAGCTGGTAGTGAGTATCATCCTGTTGGTGCGCCAATTGTGAAATCTGGAGCTTCACTACAAGCCTC AGGTGAGGCTGTGTTTGTAGATGACATTCCATCACCTACAAATTGCTTATATGGAGCATATATTTATAGTGAAAAGCCTTTAGCAAGGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_184795; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380345
| Blastp | Indole-3-acetaldehyde oxidase from Arabidopsis with 57.12% of identity |
|---|---|
| Blastx | Indole-3-acetaldehyde oxidase from Arabidopsis with 55.56% of identity |
| Eggnog | xanthine dehydrogenase(COG4630) |
| Kegg | Link to kegg annotations (AT3G43600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455869.1) |
| Pfam | 2Fe-2S iron-sulfur cluster binding domain (PF00111.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |