Ll_transcript_380339

• Id Trinity: TRINITY_DN51418_c0_g1_i6
• Name Transcript: Ll_transcript_380339
• Sequence: CGAAGTTTGGTTATAGTATTTCATTGAACTTCACTTTGGTAGTACTCAAATAAATGGAGGAGAAGGGTGTCACACAATCAAAATTGGTTTTTGCTGTTAA TGGTGAGAGGTTTGAGCTCTCCAAACTTGATCCTTCTACAACTTTGCTCCAATTCTTGCGTTCTCAAACTCCCTTCAAGAGTGTTAAGCTTGGCTGTGCT GAAGGTGGTTGTGGTGCATGCGTAGTTTTAATCTCCAAATATGATCCAGTGCTAGACAGCGTTGAGGATTTTACAGCGAGTTCTTGTCTCACATTACTTT GCAGCATACATGGGTGTTCCATAACAACAAGTGAAGGCATCGGAAATAGTAAAGATGGGTTCCACCCAATTCATGAAAGACTTGCAGGATTCCATGCCTC ACAGTGTGGCTTTTGCACTCCTGGGATGTGTGTTTCACTCTTTGGGACACTCGTCAATGCCGAAAAGACCAACCGTCCAGAGCCACCTCCCGGGTTCTCA AAAGTGACTGTTACTGAGGCTGAAAAGGCTATTGCAGGTAATCTTTGTCGCTGTACAGGTTATCGACCCATTGCTGATGCCTGCAAAAGCTTTGCAGCTG ATGTTGATATGGAAGATTTGGGGTTCAACTCTTTTTGGAGAAAGGGAGAGATCAAGGACTTAAAGATTAGTAAATTGCCTCAATTCAACCATAATCACAA GAGTTCTAGATTTCCAGTGTTTTTGAAGGATATCAAGCACGATGGTGTGTTCTTGGCTTCTGAGAAACACAGTTGGCACAGTCCAACTAGTCTAAAGGAG CTTCAAGGCTTATTGGAATTAAGCCAAGCCAATGGAACGCGGATAAAACTGGTTGTTAGTAATACAGGTATGGGATATTACAAAGATAAAGAAGTCTACA ATAAGTATATCGATCTTAAGGGAATTTCTGAGCTCTCAAATATCAGAAAGGATCAAACAGGTATTGAAATTGGAGCAGCAGTGACAATATCCAAAGCTAT TGAAGCACTAAAGGAACCGTGCAGAAGTGATTCTCTCTTAGAGTTTGTAACGATGCTTGAGAAGATTGCTGATCATATGAACAAAGTTGCCTCAGGGTTT ATTCGGAACACAGCCAGTGTTGGTGGAAATTTAGTGATGGCACAAAGGAACTATTTTCCCTCAGATATCGCTACAATACTCCTTGCTGTGGATTCAATGG TTCACATAATGACTGGTACACTGTTTGAGTGGCTTACATTGGAGGATTTTCTAGAAAGAGCACCATTAAGCTTGGAAAGTGTACTTTTAAGCATTAAAAT TCCATGTTTGAAACTTAATAAAAGTAAGTCTTTAGAACAAAGAAGTAGATTCCTCTTTGAAACATACCGACCCTCTCCCCGACCTCTTGGAAATGCCCTC CCCTACTTAAATGCTGCATTCCTGGTTGAGGTGTCTCCATGCAAGGATTCTGGTGGGACAATGATAGTCACTTGTAGGCTGTCTTTTGGTGCCTATGGGA TTAAACATGCAATCAGAGCAAAAACTGTTGAGGAATTTTTATCTGGGAAGCTGTTAAATGCTAGGTTTCTATATGAAGCTGTCAAGTTGCTTACGGTCAC TATTACACCTGAAGATGGAACCACAAAAGCTGACTACCGGTCAAGTTTAGCAGCTGCTTTTCTTTTTCAGTTTTTTAACCAATTAATTGACAGTCCTGTG GAAATAATCAATGGCAATTTTAACGGAGATACCAGTATTCCTTTCACTGCTGATTTTGAATTAAAAGAGAAACACAAGCAGGCTCATCTTGACAAAATTC CAACTTTACTTTCATCTGGAAAGCAACTCCTTGAAGCTGGTAGTGAGTATCATCCTGTTGGTGCGCCAATTGTGAAATCTGGAGCTTCACTACAAGCCTC AGTGAAAAGCCTTTAGCAAGGATAAGGAATATAAAACTCAGGCCTGAGTTGCAATCGGATGGAGTGAGGGAGGTCATTTCAACTAAAGATGTTCCCAATG GTGGGGAGAACATTGGATCTAAGAGCATATTTGGTGATGAACCTTTATTCGCAGAAGATATTGCTAAATGTGTTGGTGAACGTCTTGCCTTTGTGGTTGC AGATACTCAGAAACTTGCAGATATGGCTGCAAACTCTGCTGTTGTCGATTATGATATCGAAAATATTGATCCACCTATTCTGTCTGTGGAAGATGCCATT GAAAGGTCTAGCTTTTTTGAAGTTCCTCCTTTTCTCTACCCAAAATATGTTGGTGATATATCAAAAGGAATGGCTAAAGCAGATCACAAGATTCTCTCTT CCGAGATGAAACTTGGGTCTCAATACTATTTCTATATGGAGACACAAACTGCACTTGCTGTACCAGATGAAGACAATTGCATTACGGTTTATAGCTCAAG TCAGTGCCCTGAGTCTGCACATTCTATTATAGCAAGATGCCTAGGTATTCCTGAAAATAATGTTCGAGTAATTACAAGAAGGGTTGGGGGAGGTTTTGGT GGAAAAGCCATGAAATCTGTACCCGTTGCTACATCGTGTGCACTGGCAGCACACAAATTACGCCGGCCTGTAAGGATGTATTTAAATCGAAAAACTGACA TGATAATGGCTGGAGGAAGGCATCCAATGAAGATAATTTATAGCGTTGGGTATAAAAATGATGGGAAGATTACTGCATTAGAACTTCAGATATTGGTCAA TGCAGGGATATATGTAGATGTAAGTGCAGTGATGCCACATAACATAGTTGGTGCACTTAAAAAGTATGACTGGGGTGCTCTATCTTTTGATATAAAGGTA TGCAGAACGAATCATCCTAGTAGGTCTGCAATGAGAGGCCCTGGGGAGGTGCAGGGATCATTTATTGCTGAAGCTGTAATAGAAAATGTTGCAGCGGCAC TTTCAATTGATGCAGATTCAGTCAGAAGCATTAATCTTCACACACACAAAAGCCTTCGGTCATTCTATGAGGGTTGTTTTGGTGAACCTCATGAGTATAC CTTGCCTTCTGTGTGGAATCAGTTAGCTGTTTCTGCAAAGTACGAGCAGAGAACAGAAATGGTAAAGGAGTTTAACAAGATTAACATTTGGAAAAAAAGG GGAATTTCTCGAGTACCAGTAGTGTATCAACTGATTCTAAGACCAACCCCTGGAAAAGTAAGTATTTTATCAGACGGGTCTGTCATGGTTGAAGTTGGAG GAATTGAATTGGGTCAGGGTCTCTGGACAAAAGTGAAACAGATGGCTGCATTTGCTCTCAGTGCAATTCAATGTGATCGAAATGGTAGTCTCTTGGACAA AATACGGGTTGTACAATCTGATACTGTGAGCTTGATTCAAGGGGGATTTACTGCTGGGAGCACTACATCGGAGTCTAGCTGTGAAGCAGTTAGGCTTAGC TGCAATATCTTGGTTGAGAGGTTAAGGCCTCTCAAGGAAAAGCTTCAGGAGGAAATGGGCTCTATTGATTGGAAGACACTTATTCTGCAGGCATACATGC AAGCTGTGAACTTATCAGCATCTGCATTTTATGTACCCAGTCTTGATTCCTCGATGTACCTTAATTATGGTGCTGCATTAAGTGAGGTGGAAATAGATCT TCTAACCGGAGAAACCAGATTTTTGCAAACAGATATTATCTACGATTGTGGACAGAGTCTCAACCCTGCAGTAGATTTAGGACAGATAGAAGGAGCTTTC GTCATGGGGTTAGGATTTTTCATGCTTGAAGAATACGAAACAAATCCGGATGGTTTGGTGTTGGCAGATGGCACATGGAACTACAAAATACCTACAGTAG ACACCATACCTCAAAAATTTAATGTTCAAATAATCAACAGCGGGCATCACCAGCATCGTGTTCTCTCTTCAAAGGCTTCCGGTGAGCCACCCTTACTTTT AGCAGCTTCAGTTCACTGTGCCACTAGAGCAGCTATCAAAGAAGCCAGGAAACAGATTCTTTCCTGGAGCAACAGCAACTCAGATGATATACATGATTCA AATTTTCAGTTGGAGGTCCCTGCAACCATGCCTGTGGTTAAAGAACTCATTGGACTTGACATTGTACAAAGATACCTCATATGGAAAATGGGTAGGATGT AAAAGTACTCAAGATCCTGGAACATAAGAGATGCCTTTGGATTTCACATAAAGATCATATAGTGAAAGAAATATTTTGCAATTTTTTTACATTATTCTTG ATGCATAAACTACTGGTTCAGCAAGTAGTTTCTGCATCAAGAATAAGGACTAGTCTGACAGATATATTTTGCGGAAATTATAGGGACCTCCTCTGAGATT TATATTATAATTTCAAGGGAGGTTAATATAATTTTTCCATATGTTTTTGGTGGAAAAAAGAATAAGTGAGGAATGCTGCTACTTGGTTTAAATTTGTTCT ACCTCAGTGTAACATTATTTATATGTTGATACAGCATTAATGAATTCATGCCCTTTTTCACAGTCTTCTTTTTTTCTGCAGAGAAAACTGCATATAATCA TCTTTTCCAATTATAGGGTGACACTACCATTTATATGTCCAAATATATGATCTTTTTATTTAATAATCTTTATAGTAAATATTGTAAAAATAGCTTTGTA TTAAGTCTTCT
• Tissue: pods
• Gene name: LI_gene_184795;
• Additional information: details;

Expression of Ll_transcript_380339

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 1
• PS2: 1.2
• PS3: 0.8
• PW1: 0.7
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380339

• Blastp: Abscisic-aldehyde oxidase from Arabidopsis with 68.19% of identity
• Blastx: Abscisic-aldehyde oxidase from Arabidopsis with 66.21% of identity
• Eggnog: xanthine dehydrogenase(COG4630)
• Kegg: Link to kegg annotations (AT2G27150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455868.1)
• Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase (PF02738.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;