Id Trinity | TRINITY_DN51418_c0_g1_i7 |
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Name Transcript | Ll_transcript_380340 |
Sequence | TGCTTGCTTCCTTTAGTGCTTCAATTGCTTTAGATATTGCCACCACTGCTCCAATTTCAAGACCTGTTTGATCCTTATTGATCTTCGAGAGCTCTAAAAT CCCCCTAAGATCGATATATTTATCATAGGGGGATTTTAGAGCTCTCGAAGATCAATAAGGATCAAACAGGTCTTGAAATTGGAGCAGTGGTGGCAATATC TAAAGCAATTGAAGCACTAAAGGAAGCAAGCAGAAGTGATTTTCTCTCGGAGTTTGTGATGATACTTGAGAAGATCGCTGACCATATGAGCAAAGTTGCC TCAGGGTTTATTCGGAACACTGCGAGTGTAGGTGGAAATTTAGTAATGGCACAAAAGAATCATTTTCCCTCAGATATTGCTACAATACTCCTTGCTGTGG ATTCAATGGTTCACATAATGACTGGTACACAATTTGAGTGGCTTACATTGGAGGAGTTTCTAGAAAGAGCACCGTTAAGCTTCGATAGTGTACTTTTAAG CATTAAAATTCCAAGTTTGGCACTTACTAAAAGTAAGTCTTCAGAAAAAATAAGTAGATTCCTCTTTGAAACATACCGTGCTTCTCCTCGACCCCTTGGA AATGCCCTTGCCTACTTAAATGCAGCGTTCCTGGTTGAGGTGTCTCCATGCAAGGATTCTGGTGGAACAATGATAGACAATTGTAGGCTGTCTTTTGGTG CCTATGGGACTAAACATGCAATAAGAGCAAAAAATGTTGAAGAAATATTAGCCGGAAAGCTGTTAACTATTAGTATTCTATATGAAGCTGTCAACTTGCT TACAACTACTATTGTACCTGAAGATGGAACCTCAAAATCTGCCTACCGGTCAAGTTTGGCGGCTGCTTTTCTTTTTCAGTTTTTTAGCCCGTTAATTGAC AATCCTGCCAAAATAACCTATGGCTATTTAAATGAACATACAAGTGTGCCTTTCATGAAGGATTTTGAATTAAAAGAGAATCATAAGCAGGTTCATCATG ACAAAATTCCAACTTTACTGTCATCTGGAAAGCAAGTCATTGAAGCAGGTAGTGAGTATCATCCCGTTGGTGCGCCAATCGTGAAATCTGGAGCTGCGCT ACAAGCCTCAGGTGAGACTGTGTATGTAGATGACATTCCATCACCAACAAATTGCCTGTATGGAGCATATATTTATAGCGAAAAGCCTTTAGCAAGGATC CGGAGTATAAAACTCAGGCCTGAATTGCAACTAGATGGAGTGAGGGACATCATTTCAATTAAAGACATTCCAAATGGTGGGGAGAATATAGGATCTAAGA GTATATTTGGTTCCGAGCCTTTATTTGCAGAAAATATTGCTCAGTGTGTTGGTGATCGTCTTGCCCTTGTGGTTGCAGATACTCAGAAACTAGCAGATAT GGCTGCAAACTCGGCTATTGTTGATTATGATATTGAAAATATTGAGTCACCTATTCTTTCTGTGGAAGAAGCTGTTGAAAGATCTAGCTTTTTTGAAGTT CCTCCTTTTCTCTCCCCAAAACATGTTGGCGATATATCGAAAGGAATGGCTGAAGCAGATCACAGGATTCTTTCTGCCGAGATGAAACTTGGATCTCAAT ACTATTTCTATTTGGAGACACAAACTGCACTTGCTGTACCAGATGAAGACAGCTGCATTGTTGTTTACAGCTCAAGTCAATGCCCTGAGATTGCACACTC TACTGTAGCAAGATGCCTCGGCATTCCTGAAAATAACGTTCGTATAATTACAAGAAGGGTTGGGGGAGGTTATGGAGGAAAAGCCGTGAAAGCCGTGTCT GTTGCTGTATCGTGTGCAGTTGCAGCACACAAATTAAGCCGGCCTGTCAGGATTTATCTAAATAGAAAGACAGACATGATAATGGCTGGAGGAAGGCATC CCATGAAGATAATTTACAGTGTTGGATTTAAAAATGATGGGAAGATTACTGCGTTAGAACTTCAGATATTGGTCGATGCCGGGATATATGTGGATGTAAG TGCAATAATGCCGCGAAACATAGTTAGCGCACTTAAAAAGTACGATTGGGGAGCTCTATCTTTTGATATAAAGGTATGCAGAACAAATCGTCCTAGTAGG TCTGCAATGAGGGGCCCTGGGGAGGTGCAGGGGTCCTTTATTGCTGAAGCTGTGATAGAAAATGTTGCAGCTGCACTTTTAATGGATGTAGATTTAGTAA GAAGCATTAATCTTCACACACACAAAAGCCTTCAATCATTCTATGAGGGTGCTGCCGGTGAACCTCATGAGTATACCTTGCCTTCTGTATGGCATAAGTT GGCTGTTTCTGCAAACTTTGAACAGAGAGTTGAACTGGTGAAAGAGTTCAATAAGATTAACACTTGGAAAAAAAGAGGAATTTCTCGAGTACCTGTAGTG TATCAACTGACTCTAAGACCAACTCCCGGAAAAGTTAGTATCTTTTCAGATGGGTCTGTCGTTGTTGAAGTTGGGGGAATCGAATTGGGACAGGGTCTCT GGACGAAGGTGAAACAGATGGCTGCATTTGCTCTCAGTTCAATTCAATGTGATGGAACTACAGATCTCGTAGACAAAGTACGGGTTGTACAATCTGATAC CGTTAGCTTGATTCAAGGGGGATTCACTGCTGGGAGCACTACATCGGAGTCTAGCTGTGAAGCAGTTAGGCTTAGCTGCAATGTCTTGGTTGAGAGGTTA AGGCCACTCAAGGAAAAGCTGCAGAATGAAATAGGCCCTATTAAGTGGGAGTCGCTTATTCTTCAGGCATATATGCAATCTTTGAACTTATCAGCATCTT CATTTTATGTACCAAATGATGATTCCACCAATTACCTTAATTATGGTGCTGCAATAAGCGAGGTGGAAATAGATCTTCTGATTGGAGAAACCAGATTTTT GCAAACAGATATTGTCTATGATTGTGGACAGAGTCTCAACCCTGCTGTGGATTTAGGACAGATTGAAGGAGCTTTTGTTCAAGGGTTGGGTTTTTTCATG CTTGAAGAATATGAAACAAATGGTGATGGTTTGGTGTTAGCAGATGGCACATGGAACTACAAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_184795; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380340
Blastp | Indole-3-acetaldehyde oxidase from Arabidopsis with 61.05% of identity |
---|---|
Blastx | Indole-3-acetaldehyde oxidase from Arabidopsis with 60.12% of identity |
Eggnog | xanthine dehydrogenase(COG4630) |
Kegg | Link to kegg annotations (AT3G43600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434190.1) |
Pfam | FAD binding domain in molybdopterin dehydrogenase (PF00941.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |