| Id Trinity | TRINITY_DN51424_c1_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_381437 |
| Sequence | AAACAGGTTAGTTTTTATGATTCATTATTTTTCATCTCTATTTTTTATTATTTTTTTATTTTTGCATAGGTTTGGAAGTTTATAAAAAATGTTATTTTTA TAATAGATAAGTTTTTTTGAAATGCTTGTGGTTGTGGAGATTAAAAAAAAATGAAATTTGAGTGAGATTTGATTAGCACTATATCAGTATATTTAAACTC CCCTTAAACAAGGTCTCGGTTCGAGTCTTGTAGATGGAGAAAATATCTGTCGGATAGTTAACCCCATATACTTATAGATATTCTCGACACGGAAGAAGAA TTTGAGACTCTGCTGCTCTAAATACAGTTCATACTTTCAATATGGATCTTTTATCATTGTTTTCTTTTCAGAATTACCAACAAAAAAAGTGTTACATTGA AAAAAAGAATCTTTTGATCATGCTTCTAACAACAAGTATATGAGTGGATCCAAATCCCATCAAAGAAATTTTGTTATTTTCTGTGTGCCCTTCACACTTT TCTATCTTAAAAGCAAGGCATAATGAACAGTGAGAGTGAGAAGAAGAAAAAACAGTGAAATTTAGAAATCATGAAACTATCTTCACAAATTGTAATCACC TCAATTTAATTCCCTCAATCAATTTTCTTCCTCCTTTTTCTTTTTTAACCTTCAAACTCAACAATTTAGTGAATTTTCTTATCCTTATCAATTCCAAAGA AATTAGGGTTTTTTAAGTGTCTAAGCATTTTTGCTGAATTTTTTTACTTTTCTTTTGGAAAGTTGTAGTCTTTTCTCAATTGGGTTTTGTGGGTAACTGC TGGAAATTCATGCCGCCGTCTGTGGTGGATCCTTTCTTGCTGCCACCGTCACTTCCGCCGTTGAGCTCTGACTCTGTTTCCCGGAGATCTGAGGATCAGA GATTCAGTGATCTTAGAGGGTTGAAATGGCGTATGAATCTTGGGGTTTTGCCATCTTCATCTTCAATTCATGATCTTCGCCGCGCCACAGCTGATTCTAG AAGGAGGTATGCCAGTTTAAGAAGGCAACTCCTGGTTGAATCACATATAGCAAAGGATGGAAGCAGTTCAGACGATGTTGTCATGGACAACCCCCTTTCA CAAAATCCAGATAGTCCATGGAGTCGCTTTTTTCACAGTGTAGAGCTAGAGAGAATTGTTGTTCAGGATTTATCACGTTTATACCCAGAGCATGGCTGTT ATTTCCAGACACCAGGATGCCAAGGCATTTTGAGACGGATTTTATTATTATGGTGTCTGAGACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAATT ACTTGCTCCTTTGCTTTATGTTCTCCAAGTTGATCTGGAGCGTCTTTCCGAAGTTCGAAAGCTTTATGAAGATCTCTTCACAGACAGATTTGATGAACTT TTATGTCAAGAGAATGATCTTTGTTACAGCTTTGAATTTCGAAAATCTCAAGACTCGTTGGACGATGAAACTGACACCCACGGAAAGGCAATGAAAGTCA ATAGTCTTGATGAACTTGATCCTGAGATACAGACCATTGTATTGCTAAGTGATGCTTATGGAGCTGAAGGTGAACTTGGCATTGTTTTATCTGAGAAGTT CATGGAGCATGATGCTTACTGTATGTTTGATGCTTTAATGAACGGGTCTCGTGGTTCAGTTGCAATGGTCGATTTCTTCTCCTATTCTCCTCTAGCTGGG TCCCATAGTGGCTTGCCTCCTGTAATTGAAGCTTCAACTGCATTGTATTATTTGTTGTCTTGTGTGGATTCATCACTGCATAGCCATCTTGTTGATCTTG GTGTTGAACCCCAGTACTTTGCTCTCCGCTGGTTGCGAGTTTTATTTGGACGGGAATTTTCACTTCACAACCTGTTGATCATCTGGGATGAAATCTTTTT ATCAGATAATAGTGAAGTGGTAAAGCATGCTGAGGACAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_184826; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381437
| Blastp | TBC1 domain family member 5 homolog A from Dictyostelium with 25.13% of identity |
|---|---|
| Blastx | TBC1 domain family member 5 homolog A from Dictyostelium with 25.55% of identity |
| Eggnog | TBC1 domain family, member 5(ENOG410YX8Z) |
| Kegg | Link to kegg annotations (DDB_G0280253) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417917.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |