Ll_transcript_381414

• Id Trinity: TRINITY_DN51424_c1_g1_i3
• Name Transcript: Ll_transcript_381414
• Sequence: CTCTTTTCTAGAAGAATCATCCATAAATAGTTAACACAAGTATACATATCAGATTGATACATTTTATTACCTATTATTTTTTAAATTTTCTTTTTAATCA TGTATCAATATGATTGGTTTGGTACATGAAATGAAACACCTTACAAACATGCAATCCCATTCCTCAACACAGTCCACCAATAATATCACTCAAATTTTCT TATTAACAAAAAAACAAACATGTTATTTTGTGTGTCCCTCACTTTTTCATTTATCTCTCTTGTTCTATAGAAAACCCACATCAGTTCTAACTTCTAAGCA ATAATTCAGACTCAATTTCATTGATTTTTCATATTTTTTTTGTAAAGTTGTAATCTTTTCTCAATTGGGTTCTTGAGGAACTGCTTGAAGATCATGTTGC TAGCTCCGATGGATCCGCCGCCGCCGCCGCCGTTGAGCTCCGACTCTGTTTCACTGAGATCGGAGAATCAGCGATTCGGTGATCTTAGAGGGTTGAAGTG GCGTATAAATCTTGGGGTCTTGCCATCTTCAACTTCCATTGATAATCTTCGCCGAGTCACTGCTGATTCTAGAAGGAGGTATGCCAGTTTAAGAAGGCGT CTCCTGATTGAACCACATATTCCGAGAAGTCGTTCAGCAGATCCTGTTATGGACAACCCGCTTTCGCAAAATCCAGGTAAATGTTAAGTACGTTTTCTGA CCCCGTCATAGATCTAGTTACAGATCTCTGATTCAGCCATTATACTTACCTAAATTCCTACGAAGTATAGAGCATATTAAGTACCAAAATGTTAATGATT TTTCCTCAGTTACCTTAAATAGTGCATCATAACGACAGAGGATAATTAAGAGAAAAACTAATTGTTGGATTTTATCTTTGGTAAATACGATGTGGCCTTT ATATCCAGATAGTACATGGAGTCGCTTTTTTCGCAGTGCGGAGCTCGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAGCATGGAAGTTAT TTCCAAACACCAGGATGCCAAGGCATGTTGAGACGAATTCTATTACTTTGGTGTCTCAGGCACCCGGAATGTGGCTATAGACAAGGAATGCACGAATTAC TTGCTCCTCTGCTTTATGTTCTCCAAGTTGATCTGGAGCATCTTTCTGAAGTTCGAAAGCTTTATGACGATCTCATCACAGACAGATTTGATGGGCTTTT ATGTCAAGAGAATGATCTTTGTTACAGCTTTGATTTTCGAAAATCTCAAGACTCGGTGGAGGATGAAACTGGCTCACATGGAAAGGCGATGAAAGTCAAT AGTCTTGATGAGCTTGATCCTGAGATACAGACCATTGTATTGCTAAGTGATGCTTACGGAGCGGAAGGTGAACTTGGTATTGTTTTATCGGAGAAATTCA TGGAACATGATGCTTACTGTATGTTTGATGCTTTAATGACCCATGGTTCAGTTGCAACGGCCGATTTCTTCTCTCAGTCTCCTTTAGCAGGGTCCCTTAG TGGCCTTCCTCCGGTTATTGAAGCTTCTACTGCATTATATCATTTGTTGTCTCTTGTCGATTCATCTCTACATAGCCATCTTTTGGATCTTGGGGTTGAA CCCCAGTACTTCTCTCTCCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTCGACAACCTCTTGATCATCTGGGATGAGATCTTTGCATCAGATA ATAACGGTAAAGTGGAAAAAAGTGCTAATGATGACATACAGTGGGGGTTCAGGATCTTACATTCACCTCGTGGAGCATTTATCTCGGCTATGGCCGTAGC AATGTTACTTCATTTAAGATCTTCACTCCTGGCAACTGAAAATCCTACAAAATGTCTCCAGAGATTATTAAACTTCCCTGAAGACATTAATATTGGAAAA CTCCTAGAGAAGGCTAAACCCTTGCAGGCTCTTGCATTAAGTGTCGATATTTCATCCTCTTCGCCTTTGTTTCTAGGGTCTCATCACCAAGGTAAATCAA TGCTTCCGAGATCTGGGACTCTTCAATCTGAATCTGTGTCTCCAAAAACACCTCTGAATTTGTTACCTGATAGCTATTGGGAAGAAAAGTGGAGAGTCGT CCACAATACTGACGAAAATAAGCAAGATGATGTACAAAAATTGATTCCAACTCGTAAAAAGGGATGGACAGAAAAGGTCAAAATCAGTTTGAGAAGAACG GAGTCTGATCCACCTCCATCGAGGATTCAAGGTGGGAAAAAGTTACCCAGGGCATCTGTTAGGCGCAGTTTGGTAGAAGATCTTCGTAAGGCACTTGGCT CGGAGGAAGATACAGAACAAACGAACTGTCATGAAATCCTGTGTCAGCATGATAATCTTTCCGAAGCGGTTCAAGTAGAGCGACAAAATGGTAACTGTAA AGGTGACAACAATTGCTCATCTGATGACAGATGTCCAAGTGGAAGTGCAGGCAGTGAAGACGACTTGTCTGACCGGACTAGTACTCCAAATGAGACCAAT GATCATGAAATTACCTCGGTGAAAAGTAGTGTTGCATCTAATTTATCCGTTGATGAATCCAATGAATCTTCACAAACCAGCCTCAATGGTCGATGTGCGT CGATCTCTGTTCCTCCTGATAACATACCTGAGGCGCAAGGGTCCAATGACAACAATGAAGCAAATCCAGCAACAGATCCTAAGGAAAGAAAACAGAATAA ATTCCAGTGGTTATTTAAGTTCCGGCGGAATACTGTTGACCTTATCTCTGAGAAAATAGGAGGTGCTGTGGACGCTGCAAAATCAACCAACAGTCATAGC AATCAAAGTAATACTCCATCACCGGCATCTTCTACCGCAAATGCGCATGGTAGTTCCGTTACCTGCAAAGGAGATTCCGTAGACCAGAATATGATGGGTA CTTTGAAGAATATTGGACAGTCTATGCTCGACCATATTCAGGTAATTGAAACAGTTTTCCAACAAGACAGGTCTCAGGGAACCTCAGTGGAGAACTTATC TAAGAATGTTCTTGTTGGCAAAGGCCAGGTTACTGCCATGTCAGCTCTCAAGGAGCTTAGGAAAATTAGCAATATTTTGTCTGAAATGTGAAATATGAGG TGAATCTTGTATTAACATGTATATAGATTTTGTAGCTACCATTCTTTAGTGAAATAAAATGAGTTTCTTCTACTTCATTTCAAGTATCCATTGAGATGAA TATGTAAGTACTTGTATTTGGATTACATTAATAAATGCAAGCAAAAATATTATTTTAGTCTCATCTTAATTTTTTCCAAATTTTTTTGGGTACTAAGATA TTTATGTAGTCTCCTGCGATAATATCTGC
• Tissue: pods
• Gene name: LI_gene_184826;
• Additional information: details;

Expression of Ll_transcript_381414

FPKM

• PAB: 0.5
• PNAB: 0.7
• PS1: 0.1
• PS2: 0
• PS3: 0.5
• PW1: 0.4
• PW2: 0.4
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381414

• Blastp: TBC1 domain family member 5 homolog A from Dictyostelium with 24.87% of identity
• Blastx: TBC1 domain family member 5 homolog A from Dictyostelium with 23.81% of identity
• Eggnog: TBC1 domain family, member 5(ENOG410YX8Z)
• Kegg: Link to kegg annotations (DDB_G0280253)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449861.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;