| Id Trinity | TRINITY_DN51424_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_381418 |
| Sequence | GGAAAACAAAACTGAAGTCTAAAAAACTCCAAAATCTGCAAAGAATCAACTTATCATGTTTTAGAAAAAGTTTAATATAATTTTCTCTATCTCCATCATA CAAATTTATATTCCTTCTCTATCTCCAAGTTCTATTCTATGATGACAGAAATAGAATCAGAAAAAACGTGCAACTCACCCAACAGGTTCCTTTCTCTTCC CAAGCTGACACGTCATTTCAACCACCAAAGCACTTTTCCCCCTTAATTTCATTTTCATTTCTTCCCAAATTCTCTCCCTTCTGCCCACAGTTAAATTACC CTGTCTTCTTCAACAACTCGTTGTTGTCTACCTGAAATTTTCAATTTTTAGCTTTCCCAAATGAAAATTCAAGTAATTTATTTCATTTTTTGACCCCGTG CTTCAGAAATTTAAACGAACTTTGTTGCCTTATGTTGAAAAGATTGTATCTTTGTTGATCATTGTTGCCTTTGAGCATCTGGGTCGGTGAGGAATTGCCG GATAATCACGCTGCCACCGGCTTTGATGGATCCTTCATTGTTGAAATCATCGCCGGTGAGCTCTGACATCGTTTCTGAGAGATTGAGTGATAAATTCGAA GATCTTAGAGGTTTGCAGTGGCGTATAAATCTTGGGGTTTTGCCTAATTCTCCTTCAACTTCCATTGATGATCTTCGTCGTGCCACCGCTGATTCTAGAA GAAGTTATGCCAGTTTGAGAGGGCAAGTCCTGGTTGATCCACAAAATTCAAAGGATGGAAGTAGTTCACTTTCACCCAATCTTATTATGGACAACCCACT CTCACAAAATCCAGATAGTACATGGAGTCGCCATTTTCGCAATGCAGAGCTGGAGAGGATGGTTGATAAGGATTTAACACGTTTATACCCAGAACATGGC AGTTATTTCCAGACACCAGGATGCCAAGGCATTTTGAGACGGATTTTATTATTATGGTGTCTGAGACACCCAGAGTGTGGTTATAGACAAGGAATGCATG AGTTACTTGCTCCACTTCTTTATGTTTTGCAAGTGGATGTCGAAAGTCATTCAGATGTTCGAAAACTTTATGAAGATCACTTCACTGACAGATTTGATGG CCTTTTTTGTCAAGAGAATGATCTTTCTTACAACTTCGATTTTAGAAAATCTCCAGACTTGATGGATGATGAAATTGGCTCACATGGAAATGCAATGAAA ATCAAGACTCTTGATGAGCTTGATCCTAAGATAAGGACCATTGTATTGCTAAGTGATGCTTATGGTGCGGAAGGTGAACTGGGTATTGTTTTATCAGAGA AATTTATGGAACATGATGCTTACTGTATGTTTGATGCTTTAATGACCCATGGTTCAGTTGCAACGGCCAATTTCTTCTCTTCCTCTCCTGCAGCAGAATC CGTTAGTGGCCTCTCCCCCGTGATTGAAGCTTCTACTGCACTATATCATTTGTTGTCTCTTGTGGATTCATCTCTACATAGCCATCTTTTGGATCTTGGG GTTGAACCCCAGTACTTCTCACTCCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGACAACCTCTTGATCATCTGGGACGAGATCTTTGCAT CAGATAATAATAGTAAAGTGGAAAAAAATGCTGATGACAACATAGAGTGGCGGTTCCGGATCTTACGTTCACCTCGTGGAGCGTTTATCTCAGCTATTGC TGTAGCAATGTTACTTCATTTAAGATCTTCACTCCTTGCAACTGAAAATACTACAACCTGTCTCCAGAGATTATTAAACTTCCCTGAAGGCATTAATCTT GAAAAACTACTAGTAAAGGCTAAATCCTTGCAGGCTCTTGCATTAAGTGTTGATATTTCATCCTCTTCGCCAATGTTTCTAGGGTTTCGTCACCAACGTA AACCAATGTTTTCAAGATCTGTGACCCTTCACTCTGAATCCACATCTCCAAAAACACCTCTGACTTCGTTACCTGATAGCTATTGGGAAGATAAGTGGAG AGTTGCCCACAGTACTGAAGAAAGTAAGCAAGATGTACAAATATCGGTTCCAACTCGGAAAAAGGGATGGACAGAAAAGGTTAAGATCAGTTTGAGAAGA ACAGAATCTGATCCATCTCCATCAAGGATTCAGAGTGCCAAAAGGTTACCTAAGGCATCCGTTAGGCGCAGTTTGTTAGAAGATCTTCATAAGACCCTTG GCTTGGAGGAAGATGCAGAACAAACAAATTGTCACGAAATCCTGTGCCGGCAGGATAATCTTTCTGATGTAGTTGAAGAGGAACAGCAAGATGGTGACTG TAAAGGCGACAACAATTTCTCGTCTGATGATAGATCTCCAAGTGGAAGTACAGGCAGTGAGGACAACTCTTCTGTATTCTCTGAAAGCAATGAAACTTCA CAAACCAGCCTCAGTGATCCAAGTGTGCCAACCTCTGTTCCTCCTGAGAACATACCTGAGACATCAAGGTCCAATGACAACGATGAAGGAAATTCAGCCT CAGATCCTAAGGAAAGAAAACAGAATAAATTCCAGTGGTTATTGAAGTTCGGACGGAATACTGTTGACTATGTCTTCGATAAAGTAGGCGGTGCTGCAAA GGCTGCAAAATCGGCCAACAGCTCTAGTAATCATAGTAATACTCCATCACCGGTAGAAGGTAGTTTTGTTAGCTCCAACGGAGATTCCGTAGACCAGAAT ATGATGGGCAGTTTGAAGAATATTGGACAGTCTATGCATGACCATATTCAGATAATTGAATCTATTTTCCAACAAGACCAAGGCCAAGGAGCCTCAATAG AGAATTTGTCTGAAAATGTTCTTGTTGGCAAAGGCCATGTTACTGCCATGTCAGCTCTCAAGGAGCTTCAGAAAATTAGCAACATTTTATCTGAGATTTG AGGTCAATATTGTATTAGCATTTACTATTCTTTAGTGAAATAAAAATGAGTTTCTTCTACTTTATTTCAAGTATTCCAACAAAGTTTTGCAGATTCTGAG AGAGAGAAATATGTAAATACTTCTATTCTGGTTACATAATCAATATAAGCAAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_184826; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381418
| Blastp | TBC1 domain family member 5 homolog A from Dictyostelium with 26.34% of identity |
|---|---|
| Blastx | TBC1 domain family member 5 homolog A from Dictyostelium with 25.75% of identity |
| Eggnog | TBC1 domain family, member 5(ENOG410YX8Z) |
| Kegg | Link to kegg annotations (DDB_G0280253) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417917.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |