Ll_transcript_381232

• Id Trinity: TRINITY_DN51427_c2_g1_i2
• Name Transcript: Ll_transcript_381232
• Sequence: AAGAATATTGGGTAGATGAAAATTGGGCCAACAATGGACCCAACAGTAACATGGGATCCTCCGTCCTTGTTTCTGTCGCCTAAACACTACATACATGAAT GCTTCTTCTTCTCTTCACCATTTTCACCATTCTCAACTTCAACAATGGCACCTTCTTCTCTTCTCTCCAACACTTTCCTTTCTCCCATTCATCTTCCTTC TTCCAATTCCTCTCACCCCAAACCCTCATTTCTCAATTTCCCAACCAACACTTTCAGATCTCTTACCCATTCCAAGAATACCACAAATCCAACACCTTTC ACTACCTTTTGTTCCTCCGATTCTCCCAAAGATGATTCCTCTATACCCATTGAATCAAGGTATCCAGCATTCCCAACTGTCATGGATATCAATCAGATTC GTGAAATTTTGCCTCACAGATTTCCTTTCCTTCTGGTAGATAGAGTGATTGAATACAACCCTGGAGTTTCTGCAGTTGCTATTAAGAATGTAACAATCAA TGATAACTTCTTTCCTGGACATTTTCCTGAGAGACCTATCATGCCTGGTGTTCTCATGGTTGAGGTAGTAAATACAATGCTCATCCTACACTTTTTACTT TTGAGCTTTTTTGTATTCCCGATTTCGTATTATATTTATGTTTTGTAAACATTTGTTGATATGGTTTTACGACTTACACGCTTTATGCACTATGGTGAAT ATTTTCTTCTCCGAAATAAAACAGAATGTTAGCCTTACGTCCACTATGAATATCAGTTCGAACTTCGAATTTATTTGTTTGTACTTTGTATTATGGTTGT GATATCAGCTCAATCTTTTTGCTTACCTAACAGTAACTCATTAGAAACTTTAAGAACTTTCTGAATCTTGCATATGCAAAATGACATAGTCATTCAGATG GACTATGTATGAAGTATCATGCTAGCAGTTGTCGTGCACCCTTCGTATTCCTAGACCTTTTTGTTTGCCGATTGAGTGGAACTTTATTATATATATTTTG TACAAGATACATAGTCATATCGAGACAGAGTGGATTAAAATGGTTCTTAGAAAAATTCTATTGGATTGATGTTATGTTGGTGTGATTCCTTGCATTGAAA ATTTGCTGCATTGAAAAGAGCTCTATCAATTATTAGGGGTCCAACAGCAACAAGATATGAGAAAATCTATTAATTTGCTTAAACATGAATTGTAAAATTT TAGGGTAAAGTTAACAAGGTCACTTTGATTGTTTTTGAAAATTGAACATATTATTGCACAAGAACATAGTAAAATAAATTTAGTATCAGTAAAATTGATC ATACTCCTTTTTGTGTCTGAGTGTTTATATTGAGTATATCGTTTAAATCCTTATATGGATATCAGACGAATATCAGCATCATAATAAATAACAGTGCATT TCTTCACAAACAGTTTTGTAGAGTCCTTTCATAATATAAAAAATGTCGGGGCCATCTGTATGATATGTTCCTGACCAGAGTAAAGGAAAAAATGAAAGAA ATATTAAATGATTTCTGTTGCAATCTATTCTCGAAGTGGTGATGAATATGATGAGAGATCTTTTGTTGCAGGCATTGGCACAAGTTGGAGGCATTGTGAT GTTGCAACCTGAAGTGGGAGGTTCTCGCGATAATTTCTTCTTTGCTGGAATAGA
• Tissue: pods
• Gene name: LI_gene_184843;
• Additional information: details;

Expression of Ll_transcript_381232

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0.6
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381232

• Blastp: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ from Janthinobacterium with 56.58% of identity
• Blastx: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ from Janthinobacterium with 56.58% of identity
• Eggnog: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (By similarity)(COG0764)
• Kegg: Link to kegg annotations (mma_2047)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426358.1)
• Pfam: FabA-like domain (PF07977.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;