Ll_transcript_381242

• Id Trinity: TRINITY_DN51427_c2_g1_i9
• Name Transcript: Ll_transcript_381242
• Sequence: CAAAGAACAACCATCTGGTTATGCTGTTAAGAGTTGAGTGTGAAGCTAATCAACATTGACAATGGCATCCAATGCTTTTTCCAACACTTTCTTCTCTTCC ACTTCTCCTCCATTATCTCATTCTTCTCTTCCCAAAATCTCATCTTTCACATTTCCCAACTCAAAATCTCACCCTCTTTCTACCCACTTCAGGAAGATCA ATTGCACAACACGCTTCACAACGTTTTCTTCTTCACATCATTGAAATCCTTCAAAACAAGACACCCCAATTGAATTAAAGTATTCTGCATTTCCAACAGC ATTGGATATCAATCAGATTCGTGAAATTCTGCCACACAGGTTTCCCTTTCTCCTAGTGGATAGAGTGATTGAATACAATCCTGGAGTTTCTGCAGTGGCC ATAAAGAATGTAACAATAAATGATAACTTCTTTCCAGGACATTTTCCAGAAAGGCCAATCATGCCTGGTGTTCTCATGGTTGAGGGTACTTCGATGTAGT TGTATACTTCTTTAAAGGAAATGATTATGGATGGGTCTCTAATGTTTATAGATTGGATACAAGCTCTTAGTAGCAGTTCATCTGGATCAACTTGGTTATC AGAAAGTATCCCTTAAATTGATAAAATGCTGATAGGTTTGCTAGTATTGAAATTTTGGAGCAATAGCAAGTGATTTGTCAATTATAATGGTCCAACCAGT AGTAGCTAAAGATGGTTATCATTTTGTCTGAAGTAAATGTTTAGGATAAAGTTGAAGAAGTTCCTCTAGATGCTTTTGAACATTTTAACATACTATTTCT CATGCTAGCAGTAAAGTAGACTATTTCCTTATACAAAAATGCTTCAATGAGATTAGTAGTTAAATTTGGAATAGTTTGTCTTGATGCCTACAGCTCCACG TTGTCTTCAA
• Tissue: pods
• Gene name: LI_gene_184843;
• Additional information: -

Expression of Ll_transcript_381242

FPKM

• PAB: 3.7
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.3
• PS3: 0.6
• PW1: 0.2
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381242

• Blastp: -
• Blastx: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ from Janthinobacterium with 62.5% of identity
• Eggnog: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (By similarity)(COG0764)
• Kegg: Link to kegg annotations (mma_2047)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_012572389.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;