Ll_transcript_381016

• Id Trinity: TRINITY_DN51441_c0_g1_i16
• Name Transcript: Ll_transcript_381016
• Sequence: GACTTCTAGACTCTAGTACATTCAACTTTAAGATGCTCTAACTAACCTAAAGGCCCTTCCTTGTTCTTCTGAGTGTTTTGTTTTTCAGTTTAACAACTGT GATAACAGAATCTCAAACACAATATTCATATTCGAGGTCTTTGTCTACTTGAGAACTTTGAAAACAACTTTTTATCATTTGGGTAGAACATTGGCTTTAG CATGCAACTTGGCTCCGGTAAAAAGAGGGAGCGTCCAAGACACCAATAGAATAAACTAAATACACATTGAGACAAGAAAATCATGCAAGATACGAAGAAA AATCAGCAGAAACAGAAGCAGGTTGTGGTGAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGAATAAAGAGGAGGATGATATACTAAGGG AACAGATTAGCACACATGGAACTGAAAATTGGACAATTATTGCTTCTAAATTCAAGGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTATTT GAATTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTCTTATGCGAGGCACAAAAAGTATTTGGTAACAGGTGGACAGAAATAGCAAAG GTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAACCGATTCTCCACATTGTGTAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACATTT CATTCATCAATTCAAATAACAAGAGGGTTATTTTACAACATGGTTATAATACAGACACAGCGTTAGAATCTGCAGTAGCTAATAAGAAGACGAGGAGGTC TCATATCCCTGACAACGGTGCAGAAAATATCGGCTTTGGTGACAGATCACATAAACAAAATGGAACTCCATTAAATCAACAATCAAGAGCACCATTTGCA GAGTTACCTCAAAACTCTCATAATGTGAACATCTTGCCAGCCCAAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCGAAGATAAGTGCAT TGATGCAACAAGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTGATGTAAAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTT TCTGAATCGAACAAAAGAATCAGACACTCCCAGATATAAGATTCCAGATTTACAGCTTGTAGATCTTAAAGATTTGTTGGAGGACTTAAAGAGTAGTAGC GAGGGAATCCAACCATGTTGGAGCCAAATGGAACTATATGAAGACTCTCCAGGCAGTTCTGAATACAGTACAGGATCAGCTATCCTGCCTCATTCCGCGG TTGAGGATTTGGAACACGAGCTACATCAAGAAATTGGAACTGAACTGAAGTCTGTTCAAATTCGAGATGGAGATCAAGGAGTTATAGGATGCGACCAAGG GCTTCTTTCTAGTCCAACATTGAATCAGGATATATTTTCATATTGTGAGGAGCAGATAAACAATGATGGCATTGTTTATGCCTTATCAAGTGCAGAGTTC AATTCCCCTCTTCAAGTTACCCCTATGTTCAGATCCTTAACTGCAGGAATTCCTAGTCCACAATTTTCAGAAAGTGAAAAGAACTTCCTTATGAAAACAC TTGGAATGGAGTCTCCATCACTAAACTTAAGTGCCAAAACCTCACAACCACCACTCTGCAAAAGAACCCTACTACATAGCTTATAATCTGAATCTCTAAT TCGTGCGATATACAAATATTTATAAGTCCTTCCCCTTTTCTGAATCCTTTCTCCCCACCCTCAGCAATCTGGCTTGTTGAGTTCTTCTCCACTTGGTTTG AAAAAGATTGCAGTTTTGGTTCAGCATAAAATTTTGAAAGCCATACCCTCCCTTAGAATGTTACGGCACATTCTAAGGATCTTCGGCACACCTAACAGTG TTCTTTTCTTGACACTTGCACGACAAAATAGTGTGCTTAGTGTGTCATTCTTTGGTTTGTCTTCTTTGATATCATTCTGGGTTTGTTTTTTCTCTAATCC AGCTTTTGGTCTATGGTTTGCTTTTTCTTTTTGTACAGAGCTTGTTGTGTGATATTAGTCATCTTGAGTGTATGTATACCTCGGCAATTCGCCTATCCTA CTACATATATTGAACATAAACATAGATAGAAGAGAGAAAGGCAAAAAAAAGTGAGAGTAAAGAATTAACCAATAGGATATTGGATTCCTATTTATTGTTT TCAGCTTGCTTAGATTATAGAATAAATATTCTTTTTATCTTTTTGGTTCTGATGTACTGAAACATAATTATAAATGGAGTGGAAGTGCATTTTGGCTTTG GTGTGGAG
• Tissue: pods
• Gene name: LI_gene_184966;
• Additional information: details;

Expression of Ll_transcript_381016

FPKM

• PAB: 0.2
• PNAB: 4.4
• PS1: 0.5
• PS2: 0.3
• PS3: 0.3
• PW1: 2.6
• PW2: 1.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381016

• Blastp: Transcription factor MYB88 from Arabidopsis with 55.56% of identity
• Blastx: Transcription factor MYB88 from Arabidopsis with 56.14% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT2G02820)
• CantataDB: Link to cantataDB annotations (CNT0002598)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432054.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;