Ll_transcript_379872

Id TrinityTRINITY_DN51442_c2_g1_i15
Name TranscriptLl_transcript_379872
SequenceCCATGTCCACCACAACACTTCACTCCACTTATCATCTCAAACTCACCGATTCAACTCGCCCTCACACCACTCGCAAACGCAAACCGAACGAGTTACCATT CAAGGAGACTCAGCAAGGTTTCGTCGACTACGACAATGGCCACCACGACGTTTCCAACAAGGTCACCGGAATCCTCAAGGACGGAATTCCCGCCCGGTAC CGAATCCGAGTCGCCGGAAACCGATTCCAGAAGGATTGGACCGTTTCTGAGGTCGTTGAATTGGTTCTCAGCCTCGACCTTAGTGATGATATTGACGGTT TATTGAACCGATGGGTTGGACGCTTCGCACGCAAGAATTTCCCTTACCTTATTAAGGAGTTGAGTCAGAGAGGGAATATTGAACATTGTAACCGCGTTTT CGAGTGGATGAAGAAGCAAAGGAATTACTGTGCTCGGAATGATATATACAATATGATGATAAGGTTGCATGCAAGGCATAATCGAGTAGACCAGGCACGT GGCTTATTTTTTGAGATGCAAAAGTGGAGGTGCAAGCCTGATGTTGAGACTTACAATGCAATTATCAATGCACATGGTCGAGCTGGACAATGGCGTTGGG CTAAGAATATCATGGAAGACATGCTACGTGCAGCTGTGTGTACTCTGTATTTTTCTTCCCTAGTCAATCTTTAATAGCACCAAGTCGGTCAACGTATAAC AACTTGATAAATGCATGTGGATCTAGTGGAAATTGGAAAGAAGCTCTTAATATTTGCAAGAAAATGACAGACAATGGAGTTGGGCCTGATCTTGTTACTC ACAATATTGTGTTATCTGCATTTAAAAGTGGGGCTCAATATTCCAAAGCTCTGTCTTATTTTGAACTAATGAAGGGAACTCATATTCGTCCAGACACAAC TACGCTTAATATCATCATCCATTGTCTGGTGAAGCTTGGACAATATGACAAAGCCATTGATATTTTTAATTCCATGAGGGAAAAGAAGTCAGAATGCCAC CCTGATGTTGTAACTTTCACTAGTATCATCCACTTGTATTCTGTATGTGGGCAAGTTGAAAACTGTGGGGCTGCGTTCAGTATGATCCTTGCAGAAGGGC TGAAACCAAATATAGTCTCATATAATGCACTAATAGGTGCGTATGCTGCTCGTGGGATGGACAAGGAAGCATTTTCTGTTTTCAGTGAAATAAATCAGAA TGGTTTACGCCCAGATATTGTATCCTATACATCTCTGCTTAATGCTTATGGAAGATCACAAAAGCCCCAAAAAGCAAGGGAAGTATTTGAAATGATAAAG AGGAAAAAGTTGAAGCCAAACGTTGTCAGCTACAATGCACTGATTGATGCCTATGGATCTAATGATTTGTTGGCTGAGGCAATTGAAATCTTGCGTGAGA TGGAGCAAGATGGTATTTATCCAAATGTGGTCTCAATATGCACTCTCTTGGCTGCCTGTGGGCGATGCAGTAAGAAGGTGAAGATTGATACAGTGCTATC AGCAGCAGAGATGCGAGGCATTAAATTGAATACATTTGCATATAATTCAGCTATAGGAAGCTATATGAATGTCGGGGAATACGACAAAGCTACAGGCTTG TATAAATCTATGAGGAAGAAGAAAATAAAACCTGATTCTGTTACCTACACTGTGTTGATAAGTGGTTGTTGTAAGATGTCAAAATATGGTGAAGCCCTAT CTTTTATGGAAGAGATGATGCAATTAGAACTTCCTTTGTCCAAAGAGGTCTACTCATCTATCATATGTGCCTACAGCAAACAAGGCCAAATTGCAGAAGC AGAATCTACATTCAACTTGATGAAATCATCTGGTTGCTACCCTGATGTGGTTACATACACTGCAATGCTTGATGCATACAATGCAGCCGAGAATTGGGAG AAAGCATATGCTCTCTTTGAAGAAATGGAAGTAAATGGCATCAAGCTAGATACAATTGCATGTGCAGCCCTAATGCGAGCTTTCAATGAAGGTGGCCAGT CTGGAAAGGTCCTTAGTCTTGCAAAGAATATGCGAGAAAAAGAGATTCCTTTTAGTGAAACCATCTTTTTTGAGATGGTATCTGCCTGTAGCTTGTAAGT TCAAATTTGTCCCTATATCTCCAGGGAAAACATTTTAATTAAACATTAAACCTGTCATTCTCTGGTTCTTAATTTTTTACTGGATTTCGTGGAGCTTCTA AAAATATTCATCTCCATAGTGCTTCCTCTGTTAGTGTAAGTTATTGCTAATTGAGGTTGAAGTTTGTTTACTATTTTCCTAATCTAGACATGATGGCATT TTTCCACCAGATGCAAAATTCTTATGGGTTAATACTTCTCATAATTAGGTTATTACTTGCCACTTCGATTGCTGTTTAAGCAGTAGATGGCCCTTATTCT TCAAGCACAATTTGTTGAAATTTCATATGTTTTCCTCCCATTTGATATATCTTTGTAGTCATTATTATTTTTTCACAATAATATTATGTTAAGATTTTGT TAATTTTTTTATTGGTGGAACTTCGATTAGAATAACATATTCTGATGCTCAAAAGACTAGGCAAGAAGCATAGAGAATAGGCCCTATTACTTAAACTGCT TTGATTAGATAAGCATATTTTATGGTATGATTTTTTTAATAGAGTTATTGTATTTTATTATTATTTCCCTGTTAAACTAAATGTGTCTTTTGGCGTAAGA TTACATGATTGGAGGACAGCTGTTGATATGATCAAGTACATAGAGCCCTCACTTCCTGTAATTTCATCTGGATGTTTGAATTTGTTCCTGCAATTTTTAG GAAATAGCGGGAAAAATGAAACTATGTTGAAGTTATTCTACAAAATGCTTGCATCGGGTGCTGAAGTTAACTTCAATACTTATTCTATTTTATTGAAGAA CCTTTTATCCTCGGGAAATTGGAGGAAATATTTAGAGGCAAGCTCTTTCTCTCCTCTCTTGAAGATTTAAATTAGTGATGACCCATACAAATTTAAGCTC ATGAGTTTTTTTTTGGGGTCGGGGGTTAAATTTTCTGTTTGGTACAAATAGTTAGGTCTATTGCATGCATAGAGGATCATAACTATCCAAGTGGAGCAAT TGTTACAGTTTTAACTAATTATATATTGTTAAATGTGAAGAGTGTAAGCCTTGGTGCAACCATAAGGTTGTTTGCCTTATGTTTTGGAGATCATGGGTTC AAATCCTGGAGACAACCTCTTTGTTTGTGAGGGTAAGGCTGCATATATC BLAST
Tissuepods
Gene nameLI_gene_184979; 
Additional informationdetails; 

Expression of Ll_transcript_379872

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_379872
BlastpPentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 69.75% of identity
BlastxPentatricopeptide repeat-containing protein At2g41720 from Arabidopsis with 68.62% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT2G41720)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434154.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;