Ll_transcript_380147

• Id Trinity: TRINITY_DN51444_c0_g1_i12
• Name Transcript: Ll_transcript_380147
• Sequence: TAAAATTGGAGGAAAAATACAAAGAAGAGTCCCTGTTATGGCGTAGTGAGCAAAGCAAGTTGCAAGAACCTTGAACTGAATGCTTAGAATGCACGCGTCG TTCATTCCCTTTCTCTCTAACCCTAATTCTACTCTTCATTCCAATTCTTTATATCTTTCATAACATAACCAATTCTTTTTTTGTCATCATATCCATTACA CACCACAAGAAAACCTTTATTCATTTATCCATCAAATTTTGATTTTGATTCTTTGGGTGTTGTTCCCTTGTTATGATTTTCACTTGGATATGGCACTTCA ATCATGGGTACTCGGTCACCAACTTCTTCTAACTGCTTCTAGGTTACCTTACATTTCACACCCTAAGAGAATAATCCCAATCAAAGTTACAGCATCAGCT TCAAACACTGCATACCCATTTCCCTCACTCTCCAAAAGCTTTCTCCTTTCTACTTCTAACACCGCTTCAGATACCAATTTATTTTCTAGAACCCGCTTGT TGAGGTGTTTAGCTACTAGCACTCGTGGTGATTCCTTGAATGGAACAAATTCTGTTTCCAAACTCAATTTCAACTTTATACACCAATTGCTGAACAGGGG AATCATTTTGGCTGCAACTGTTTGTGGGGTACTGGTTTTTGGATGTCGTCGAGTTCTCGCTGTTGAAGGTGTTGCCAATGCTGCATATGGTGTTATTGAC CAGGGCATACTTTTGCTTAAGAGCACTTGGCCTAAATTGTTGCCGTTTCTTCGTATGTTTAAGGAGCATGGTTTAGTGTTGGCACTGCTTTTGAGTCTTT CGGCTTTTTTCTCCATGGCTGAGACTTCAATTACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAATCTGAAAATGGTGTCTTTAGACT ACTCCGAAGTGATGTTACTCGATTCCTTACAACTATACTTATTGGCACAACTGTGGTCAATATTGGGGCAACTGCTTTGGTCACAGAAGCTGCAACTGCA ATATTTGGCGAAGCTGGTGTTAGCGCAGCTACAGGAGTGATGACTGTTGCCATTTTACTTCTCACTGAAATCACTCCAAAAAGTATAGCAGTTCATAATG CCACAGAGGTAGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCCGTGGTGTTGTATCCTGTTGGAAGAGTTGTTACTTATCTTTCAATGGGGATGCT GAAATTACTTGGCTTAAAAGGAAGAAGCGAACCGTATGTAACTGAAGATGAGCTAAAATTGATGCTAAGGGGTGCAGAATTAAGTGGGGCCATAGAGGAG GAAGAACAGGATATGATTGAAAATGTGTTGGAGATAAAAGACACACATGTTAGAGAGGTTATGACACCACTTGTCGATGTTGTTGCAATTGATGCAAGTT TAAGCCTTGTAGATTTTCATGACTTGTGGGTCACGCATCAGTACTCAAGGGTACCTGTTTTTGAGCAACGTGTTGATAACATAATGGGCATAGCATATGC AATGGATCTGCTAGATTATGTACAAAAGGGTGAATTGCTAGAAAGTACTACTGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCTGATTCAATG TCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAATATGGTGGAACTGTGGGAGTATGTGCCCGCCATA TCATAATCCAACGAGCTGATATTTGTTTATTTGATAAATATATATTCGAACACATACTTCAACTTTATGATTCATTGAAGACATATTGTGCTAATAAGTA TCATTGGCCCAAAGGAAGTATTGAAAGATAACAATTAGAAACATGCTATCAGTGTGGATGTTTGTTTCCTTCAATTTCTTTTGCAATTATATAAAACCTC ATTCTTGTATTATTACCTTGAAAAATATAATAGAATCAACATTGAGATAAAAGGCCATCATAAAAAACTATGGCAAGAACGTTCATAAATGATCATGTGG AAATAAGAGAACAGCTTCAGTTATTTTATATAGTGTTCCACATGAGTTATAGTTGTATTGTTTCTCATGTTATAATATAAAGAGTTGTTCCTGATTTCTT GTCTCACTCTACAGACCAAAACTCCTTTTGGATATAAGCCTGTTATGATTTGCTAAATGCCTTATTTACCTACTCTTCGCATCATTCCCCCGCCTTTAAC TTTCCTAGATCTTATTACAACCAGTTTTGAATTTCTAATGGCAGTTTTCCTCCTATCCTTTGAATCCATTTTGTTAATGACTTTATAGTCCATTCTTTCA CATGCTTGTTGCATTTAGCGACAGCTGGTATAAGACTTGGGTGTAGTGACTAGTAAGTCCAATTTATTAATAGCTAAACTGAGAGGGAGGGAGGTTTACT TCTTACACAAAGCTCAATAGATTGTAATTTGTTGCTAAGTCTTCTGCAATCCATTCCACATGGTCTTTCTATAAGTTCTAACAGTTTTCACATTTTGATG TTCATTTAATCTAAGCTGTATTTTTTACATTGCTGTGTGTCAGATTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATATTTGATGAGAAT GACTCAAAGGAGGAGATACAGAAAAAAACTGGCTACATAGTAATGCGAGCCGAGGGTGTATTTGACGTGGATGCAAACACATCTATTGATCAGCTCTCTG AAGATTTGAACATCAAGATGCCAGAGGAGGGTCACCAGTATGAGACTGTATCGGGCTTTGTATGTGAAGCATTTGGATACATACCGAGGACAGGGGAGTG CATCAAAGTGGTTCTTGAAAGGGAAGATGAAGACGAAGATGACGATTCCAATGGTGACCACCAGGATCAGAAGGAGAAGAACCACACTTTCAAACTTGAG GTAATCACTTTGTTGCCATCTGAAAATAGTCACTTGTGTGAGTCTTAGGCAGCGTTTGTCGTGTGAATAGAACAAGACAATGGAATGCCTTGTTCTACTG TGTTTGGTTCCACCCTTTTCACTTGACTAGCAAGAGCCCATGCAATCTTTAGGCATGTGTGAGCCATATAGTTATAAGGTTTGAAATAAACTCTACTTTT TCTCATCTTTTTGAAGCAATGATCTGAATCTAGAGCTTCTTTGTTTTTCTGTTTTTGTCCTTGGCACCTTGGCGCAGATACTAGCCGGAAATGCCAGAAA AGTTAGTGCTGTCAGGTTTGAAAGGATAAATGGTGACGATGAAATGGTGCATTCTAAAGCAGTAACTCGTGTGCTCCCGAAAATCACGAAAAGAAAATGG AGCAGTGAGGAGGATCCGGATGATGCAGCAGAGTATGACGGAAATGCATTTGCAAAGAGAACACAGGATGACATGTCTAATGAATATGTAGATGATTTGG AAAATTGTAATAGAGATTAAGCTCTTTTCTTTCTGTCTTTTATTTCTATTTACTTGGCATGCTTTTGTGCCATTTTTGCCACACAATGTATGATGGATGA GATTGATTGATATACATGTAGAAAATGAGTAATGAGAATCATTTAGAACCTTTCAATCACAAGTAGAGGCATTTACTCCAACAAAAACATCCTTCATCTC CATGTCT
• Tissue: pods
• Gene name: LI_gene_184988;
• Additional information: details;

Expression of Ll_transcript_380147

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380147

• Blastp: DUF21 domain-containing protein At1g55930, chloroplastic from Arabidopsis with 76.68% of identity
• Blastx: Putative DUF21 domain-containing protein At3g13070, chloroplastic from Arabidopsis with 76.5% of identity
• Eggnog: CBS Domain protein(COG1253)
• Kegg: Link to kegg annotations (AT1G55930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456345.1)
• Pfam: Domain of unknown function DUF21 (PF01595.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;