Ll_transcript_380140

• Id Trinity: TRINITY_DN51444_c0_g1_i5
• Name Transcript: Ll_transcript_380140
• Sequence: AAGAATAGTCCCCTCTCGTCCCCATTGGTTGGTACGCCGTACTCAGCAAAGCAAGTTGCAGCTTCCGATACACGCGCCGCCCATTCCATTTCTCCTTTTT CTCAAACCCTAACTTCATTCTTCATTCCAATTTTTTATGCCAACACACCAAAACCATTACATTTTCCATTTTTATACACACTAAGCATAAGAAGAAGAAA AATACAATCTTTATTTATTTATTCATCAGAATTCGATTTTGACTTGTTGGGTGTTGTTATATTGTTATGATATTTACTTGGATATGGCACTTGAATCATG GGTACTCGGTCACCAACTTCTCCTAACAGGTTATAGGTTACCTCACATTTCACATCCAAAGAGAATAATCCCAATCAAAGTTGCATTAGATACAAACAAT GCATACCCATTTCCCTCACTCTCCAAAAGCTTTCTCCTTTCTAGTTATAACAATACCAATGTATTTCGTGGAACTCGCTTTTTGAGGTGTTTAGGTAGTA GCAGCACTAGCAGTATTGGTGATTCTTTGAATGGAACAAATTCTGTTTCCGAAGTGAATTTCAACTTTATACAGCAATTGCTGAACAGGGGAATCATTTT GGCTGCAACTGTTTGTGTAATATTCGTTTTCGGATGTTGGCGAGCTCTTGCTGTTGAAGATGTTGCAAATGCTGGATATAGGGTTATTGATCAGAGCATG GTTTTGTTTAAGAGCACTTGGCCTAAAGTGTTGCCGGTTCTTCGTATGTTCAAGGAGCATGGTTTAGTGCTGGCACTGCTTTTGAGTCTTTCGGCTTTTT TCTCCTTGGCCGAGACTTCAATTACTACACTTTCGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAATCTGAAAATGGCGTCTTCAGACTACTCCGAAG TGATGTTACCCGATTCCTTACAACTATACTTATTGGCACAACTGTGGTCAATATTGGGGCGACGGCTTTGGTCACAGAAGCTGCAACTGCAATATTTGGC GAAGCTGGTGTTAGTGCAGCTACAGGAGTGATGACTGTTGCCATTTTACTTCTCACTGAAATCACTCCAAAAAGTATAGCAGTTCATAATGCCACTGAGG TAGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCCGTGGTGTTGTATCCTGTTGGAAGAGTTGTTACTTATCTTTCAATGGGGATGCTTAAATTGCT TCGCTTAAAAGGAATAAGTGAACCGTATGTAACTGAAGACGAGCTAAAATTGATGTTAAGGTCTGCAGAATTAAGTGGGGCCATAGAGGAGGAAGAACAG GATATGATTGAAAATGTGTTGGAGATAAAAGACACACATGTCAGAGAGGTTATGACACCACTTGTTGATGTTGTTGCTATTGATGCAAGTTTAAGCCTTT TAGATTTTCATGACTTATGGGTCACACATCAGTACTCAAGGGTACCTGTTTTCGAGCAACGTGTTGATAACATAATGGGCATAGCATATGCAATGGAACT GCTAGATTATGTACAGAAGGGTGAGTTGCTAGAAAGTACTACTGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCTGGTAACTTCTATCATGAA TTCATCTATGTTTGTGTTTTTCTTTATGCGGCTTTTTTGTATTGTTAGAACAGGGACACAGTGAGTTTATTAAGGTTCCATCTCAAAACTAGTCGGTTAT GAGAAGAGTAGTTCAACAAGTGTTTAAATCACACCGAGTAGAATGAGGCAGAAAATATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGG AAGGTTCACATGGCTGTAGTTCTTAATGAGTATGGTGGAACTGTGGGAGTACGTGCACACCATATCATAATCCAATCATCTGAGATTTGTTTATTCGACA AATTGTAACTCTTGAGGATGTTGTTGAGGAAATTGTTGGTGAAATATTTGATGAGAATGACTCAAAGGA
• Tissue: pods
• Gene name: LI_gene_184988;
• Additional information: details;

Expression of Ll_transcript_380140

FPKM

• PAB: 0.2
• PNAB: 4.2
• PS1: 2.5
• PS2: 0.6
• PS3: 2
• PW1: 1.8
• PW2: 0.9
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380140

• Blastp: Putative DUF21 domain-containing protein At3g13070, chloroplastic from Arabidopsis with 71.12% of identity
• Blastx: Putative DUF21 domain-containing protein At3g13070, chloroplastic from Arabidopsis with 78.93% of identity
• Eggnog: CBS Domain protein(COG1253)
• Kegg: Link to kegg annotations (AT3G13070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435676.1)
• Pfam: Domain of unknown function DUF21 (PF01595.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;