Ll_transcript_380127

• Id Trinity: TRINITY_DN51446_c0_g1_i12
• Name Transcript: Ll_transcript_380127
• Sequence: TTTCAAAGTCATGCATAACAAAAAAACATTTTTTTTATCATATAACAACTTTGTGCTGGAACAGTGTTGTATTTTGTTTCATCACAAGTTCATTGCATTT TTGTTCTTTCCAAAGTATTTTAAAGAACATAATGAAAACTTTGGTCACACTATTTTGTTATGCATTTAGTTTTGAGTAATGCAAGCTTCAAAAGATTTCC CTTTGTTTTTTCTTTCTCTTACAATGCATTATTAACTTTTTCTTCAGATGTCGTGAGAAGCAAAGAAAGGAAGCTTCTCGATTGCAAACAGTGAATAGAA AGCTATCTGCAATGAACAAGCTTTTGATGGAAGAAAATGATCGTCTTCAGAAGCAAGTCTCTCATCTGGTTTATGAAAATGGTTACATGAAGCAACAGAT AACCACTGTATCTGCAGCAACCACCACAGACAATAGCTGTGAGTCTGTGGTGATGACTGGTCAAAACCAACAGCAAAATATAACACCTCATCAGCATCCT CAAAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATCGCGGAGGAGACCCTGGCAGAGTTCCTGTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCC AGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTCGCTGTTTCTCGCAACTGTAGTGGGGTAGCAGCACGAGCCTGTGGCCTTGTGAGTCT AGAACCCACAAAGGTTGCCGAGATTCTTAAAGATCGACTATCTTGGTATCGTGACTGCCGATGCCTTGACGTGTTGAGCATAGCCCCTACGGGAAATGGA GGCACAATAGAGCTCATGTACATGCAGACTTATGCACCAACAACATTGGCTGCAGCGCGTGACTTCTGGACACTGAGATACACCACAAGTTTGGAAGATG GAAGTCTTGTGATATGTGAGAGATCATTGACTACTTCAACTGGAGGCCCTACGGGTCCCCCGTCTTCAAGCTTTGTAAGAGCTGAAATGCTTCCTAGTGG CTATCTAATCAGACCCTGTGATGGCGGTGGATCCATTATTCATATTGTTGATCATATTGATTTAGACGTCTGGAGTGTCCCCGAAATACTGAGGCCCCTC TACGAGTCGTCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCCTTGCAACACATTAGACAAATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTG GGGGACGCCAGCCCGCTGTTTTGAGGACACTAAGTCAGAGACTTTGCAGGGGCTTTAATGATGCTGTGAATGGGTTTGTTGATGATGGTTGGTCTCTGAT TGGTAATGATGGGGTCGATGATGTGACTATTGCTGTAAACTCATCCCCCAACAAATTCTTCGGGTCCCAGTACAATTCGTCAATGTTCCCGTCATTTGCT GGTGGGGTCCTGTGTGCCAAAGCATCAATGCTACTTCAGAATGTTCCCCCTCCTTTGCTTGTTCGCTTTTTGAGGGAGCATCGATCTGAATGGGCTGATT ATGGTGTTGATGCATATTCTGCTGCATGTCATAAGGCTAGTCCCTATGCAGTTCCTTCTGCAAGGCCTGCCGATTTCCCCACCAGCCAGATCATTTTACC TCTTGCCCATACTATTGAACACGAGGAGTTCTTGGAGGTAGTTCGTATAGAAGGCCATGCATTCCCTCCTGATGATGTGTCGTTGGCACGAGATATGTAT CTTCTGCAGCTGTGCAGTGGGGTTGATGAAAATTCGATTGGGGCATGTGCTCAACTAGTTTTTGCTCCTATTGATGAATCATTTGCCGATGATGCTCCTT TACTGCCTTCTGGTTTTCATATCATACCACTGGCTCCTAAAACAGATGCTCCGGCCACAACTAGGACTTTGGATTTGACATCAACTCTTGAAGTAGGATC TGGTAGTATTCGTCCAGCTGGTGAAACTGATTACAACCTTAGGTCGGTCCTTACCATTGCATTCCAATTTACCTTCGAGAACCATCTGCGAGACAATGTG GCTGCTATGGCTCGCCAGTACGTGCGGACTGTTGTGGGATCTGTTCAAAGGGTTGCCATGGCAATTGCTCCTGCTCGTCCCAGTACCCAGCTGGTGCCAA AGTCTCTTCCATGTTCACCCGAGGCTCTTACTTTAGCTCGATGGATTTGTAGAAGCTACAGGATCCACACCAGTGCCGAACTCTTTCGACTTGAGCCAAC ATCTGGCGATGCAATCTTGAAGCAACTCTGGCACCATTCCGATGCAATCGTGTGCTGTTCCGTAAAAACAAATGCTTCTCCAATATTCACCTTTGCAAAC CAAGCTGGACTTGACATGCTTGAAACTACTCTAGTTGCCCTTCAAGATATAATGCTTGATAAAGTTCTTGATGAAGCTGGTAGAAAGGTCCTTTGCTCTG AATTCTCCAACATAATGCAACAAGGATTTGCATATCTGCCACCAGGAATATGTGTATCCAGTATGAATCGTCCAGTATCTTATGAACAAGCCATTGCATG GAAAGTTCTGAATGATGATGATTCCAATCACTGCTTGGCTTTTATGTTCATGAACTGGTCCTTTGTCTAATGGTAGAAACCATCTTTATCAAGATACTTA TTATTATTAATTATTGTATTATGAAGTTATATTCAGGTCTTAATTACCAGAAACTATGACAGACCAATGTACTAATGACATGATTTCATGCTGGCTAATA TTTTATATTAATATGCCATTATTAGCTATATAGTTTTTGCTTTAGTCCATTTTGAAGTACCATGTTACTTTCTTGGTATATAAAAATTCTAATTAATATG TTGAATCCCTTAGTTGATTAGCTTTATTCCCTTGTTAAAG
• Tissue: pods
• Gene name: LI_gene_184998;
• Additional information: details;

Expression of Ll_transcript_380127

FPKM

• PAB: 0
• PNAB: 1.1
• PS1: 2.1
• PS2: 0.4
• PS3: 0.4
• PW1: 0.3
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380127

• Blastp: Homeobox-leucine zipper protein HOX32 from Oryza sativa with 77.38% of identity
• Blastx: Homeobox-leucine zipper protein HOX32 from Oryza sativa with 77.89% of identity
• Eggnog: homeobox-leucine zipper protein(ENOG410XQ3R)
• Kegg: Link to kegg annotations (4333544)
• CantataDB: -
• Mirbase: cln-MIR166 (MI0022568)
• Ncbi protein: Link to NCBI protein (XP_019419795.1)
• Pfam: START domain (PF01852.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;