Id Trinity | TRINITY_DN51446_c0_g1_i13 |
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Name Transcript | Ll_transcript_380128 |
Sequence | CACACACACCCTCTCTCCTTCTCTCTCATTCTCGATATTGGTGTGTTTGATAAAGACCATTGTAGAGCCAATAACCCGTTATTATTAATCAAAGTTTGAA GCTTTGTTTCTCACTTTCAAATTTGTTGTATACTGAGGAACTCATCAGTCATCACCTATCTAATGAAAGAGAGTGAAGGCTCTCTCTCTTTGAGAGCCAC ACACTAACCCAACAACAAAGTTAGTGTCTTTTTTTTCTTCTCACAAACTCTCTCACTTCCACTTTCTCACTATGGCTCTATCTATGCACAAAGACAATAA CAACAACATCATGGATTCAAGCAAGTATGTGAGGTATACACCAGAACAAGTTGAGGCTTTGGAAAGGGTCTATGCTGAATGCCCTAAACCCACTTCTTTA AGGAGGCAACAACTTATTAGGGAGTGTCCTATACTCTCTAACATTGAACCAAAACAGATCAAAGTTTGGTTTCAGAATAGAAGATGTCGTGAGAAGCAAA GAAAGGAAGCTTCTCGATTGCAAACAGTGAATAGAAAGCTATCTGCAATGAACAAGCTTTTGATGGAAGAAAATGATCGTCTTCAGAAGCAAGTCTCTCA TCTGGTTTATGAAAATGGTTACATGAAGCAACAGATAACCACTGTATCTGCAGCAACCACCACAGACAATAGCTGTGAGTCTGTGGTGATGACTGGTCAA AACCAACAGCAAAATATAACACCTCATCAGCATCCTCAAAGGGATGCTGACAACCCAGCTGGTCTTCTTGCCATCGCCGAGAAGACCCTGGCAGAGTTCC TGTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTCGCTGTTTCTCGCAACTGTAG TGGGGTAGCAGCACGAGCCTGTGGCCTTGTGAGTCTAGAACCCACAAAGGTTGCCGAGATTCTTAAAGATCGACTATCTTGGTATCGTGACTGCCGATGC CTTGACGTGTTGAGCATAGCCCCTACGGGAAATGGAGGCACAATAGAGCTCATGTACATGCAGACTTATGCACCAACAACATTGGCTGCAGCGCGTGACT TCTGGACACTGAGATACACCACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGACTACTTCAACTGGAGGCCCTACGGGTCCCCCGTC TTCAAGCTTTGTAAGAGCTGAAATGCTTCCTAGTGGCTATCTAATCAGACCCTGTGATGGCGGTGGATCCATTATTCATATTGTTGATCATATTGATTTA GACGTCTGGAGTGTCCCCGAAATACTGAGGCCCCTCTACGAGTCGTCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCCTTGCAACACATTAGACAAA TAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGGGGACGCCAGCCCGCTGTTTTGAGGACACTAAGTCAGAGACTTTGCAGGGGCTTTAATGATGC TGTGAATGGGTTTGTTGATGATGGTTGGTCTCTGATTGGTAATGATGGGGTCGATGATGTGACTATTGCTGTAAACTCATCCCCCAACAAATTCTTCGGG TCCCAGTACAATTCGTCAATGTTCCCGTCATTTGCTGGTGGGGTCCTGTGTGCCAAAGCATCAATGCTACTTCAGAATGTTCCCCCTCCTTTGCTTGTTC GCTTTTTGAGGGAGCATCGATCTGAATGGGCTGATTATGGTGTTGATGCATATTCTGCTGCATGTCATAAGGCTAGTCCCTATGCAGTTCCTTCTGCAAG GCCTGCCGATTTCCCCACCAGCCAGATCATTTTACCTCTTGCCCATACTATTGAACACGAGGAGTTCTTGGAGGTAGTTCGTATAGAAGGCCATGCATTC CCTCCTGATGATGTGTCGTTGGCACGAGATATGTATCTTCTGCAGCTGTGCAGTGGGGTTGATGAAAATTCGATTGGGGCATGTGCTCAACTAGTTTTTG CTCCTATTGATGAATCATTTGCCGATGATGCTCCTTTACTGCCTTCTGGTTTTCATATCATACCACTGGCTCCTAAAACAGATGCTCCGGCCACAACTAG GACTTTGGATTTGACATCAACTCTTGAAGTAGGATCTGGTAGTATTCGTCCAGCTGGTGAAACTGATTACAACCTTAGGTCGGTCCTTACCATTGCATTC CAATTTACCTTCGAGAACCATCTGCGAGACAATGTGGCTGCTATGGCTCGCCAGTACGTGCGGACTGTTGTGGGATCTGTTCAAAGGGTTGCCATGGCAA TTGCTCCTGCTCGTCCCAGTACCCAGCTGGTGCCAAAGTCTCTTCCATGTTCACCCGAGGCTCTTACTTTAGCTCGATGGATTTGTAGAAGCTACAGGAT CCACACCAGTGCCGAACTCTTTCGACTTGAGCCAACATCTGGCGATGCAATCTTGAAGCAACTCTGGCACCATTCCGATGCAATCGTGTGCTGTTCCGTA AAAACAAATGCTTCTCCAATATTCACCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACTACTCTAGTTGCCCTTCAAGATATAATGCTTGATAAAG TTCTTGATGAAGCTGGTAGAAAGGTCCTTTGCTCTGAATTCTCCAACATAATGCAACAAGGATTTGCATATCTGCCACCAGGAATATGTGTATCCAGTAT GAATCGTCCAGTATCTTATGAACAAGCCATTGCATGGAAAGTTCTGAATGATGATGATTCCAATCACTGCTTGGCTTTTATGTTCATGAACTGGTCCTTT GTCTAATGGTAGAAACCATCTTTATCAAGATACTTATTATTATTAATTATTGTATTATGAAGTTATATTCAGGTCTTAATTACCAGAAACTATGACAGAC CAATGTACTAATGACATGATTTCATGCTGGCTAATATTTTATATTAATATGCCATTATTAGCTATATAGTTTTTGCTTTAGTCCATTTTGAAGTACCATG TTACTTTCTTGGTATATAAAAATTCTAATTAATATGTTGAATCCCTTAGTTGATTAGCTTTATTCCCTTGTTAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_184998; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380128
Blastp | Homeobox-leucine zipper protein ATHB-14 from Arabidopsis with 77.3% of identity |
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Blastx | Homeobox-leucine zipper protein HOX32 from Oryza sativa with 78.56% of identity |
Eggnog | homeobox-leucine zipper protein(ENOG410XQ3R) |
Kegg | Link to kegg annotations (AT2G34710) |
CantataDB | - |
Mirbase | cln-MIR166 (MI0022568) |
Ncbi protein | Link to NCBI protein (XP_019419795.1) |
Pfam | Homeobox domain (PF00046.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |