Ll_transcript_380506

• Id Trinity: TRINITY_DN51448_c1_g1_i1
• Name Transcript: Ll_transcript_380506
• Sequence: AGATGGAAACAGTTAAGCCATCGGCAGTGACTCCGAGCAAGAGTAAATGGGCTCGAGCATTTGCCAAGGTTCTCCATATTAGATCAGTGAGTAAAATTGC ACAAGTTGATAGGCTGAAGAATGCTAAGGTTGATGCAAATCTCAACTGTGAAGGAAATACACTGTCCGAGTCTTTCAACAAAGATGATGAGGAACTTCTG AAAAAAATGGCAATAGAAGCTCTACTTGCAAAGCTTTTTGCTAGCATTTCAACTGTGAAAGCTTCATATGCGCAGCTACAATATGCGCAATCGCCTTATG ACCCTGATGAAATCCAAGCTGCTGATGGATTGCTTATCTCAGAGTTGAAGACTTTGTCCGAGATAAAGCGATGCTACTTGAACAAACAATTTGATCCTTC ACCAGAGAGAGCAATTCTTGCTGCCGAATCAAAGGAGCTGTTGAGTGTTATAAAAACCTATGAGATCATGGAGAAGAAGTTACAATCACAGTTGCAGCTC AAAGAATCTGAGGTTATATTTCTTAGAGAGAAGTTGGAAGAAACTAATAGGCAGAACAGGTCAATTGAGAAGAAGCTAAATCAAAGTGGATCATTATCTG TACTTGATAATCTCCATATTTCAGGATTAAGTCCTAGCCATTTTACCACTGTTCTTCGTCACAGCGTTAGGTCCATTCGGAGCTTTGTGAAGTTGATGGT GAATGAGATGAGATCCACTGGTTGGGATATCGACGCTTCGGTCAATGTTGTTACTGAACAGAATGTGGTTTACTGGAATGAAGATCACAAGTGTTTTGCA ATTGAGTCCTTTGTTTGCAGGGAGATGTTTGATTCTTTCAACACCCCAAATTTTTCTCTTCCAAATGAGTCTCTTCCCGATAGAAGTGAGCTACAACAAT TATTCTTCGGGAGGTTCAGTGAGTTAAAATCTTTAAAAGCAAAGGAGTTTCTTGCTTTCAAGCCAAGGTCACCATTTGCAAAATTTTGCAGGGTCAAGTA CTTGAAACTTATTCATCCGAAGATGGAGTCATCTTTTTTGGTGACCTGAATCAAAGGAACATTCTGAACACTGGAGAATTTCCGGACACTAAATTCTTCA CATCATTTTCCGAAATGGCTAAGAGGGTGTGGCTCTTACATTGCTTAGCCTTCTCTTTTGAGCCTCATGCTTCAATGTTTCAAGTGGAGAAAGGGTGTAG ATTCTCTGATGTGTATATGGAAAGTGTGAATGATGAAATGTTCCTTCACTCAGATGAGACAGTAGAATCAGAACCACATGTTGCTTTCACTGTGGTTCCA GGTTTTAGGATTGGTAAAACTGTTATTCAGTGCCAAGTTTACCTCTCACAACACCAAACCAAGTATATTGAAATGTAGGTGGGT
• Tissue: pods
• Gene name: LI_gene_185004;
• Additional information: details;

Expression of Ll_transcript_380506

FPKM

• PAB: 25
• PNAB: 9.9
• PS1: 31.5
• PS2: 3.6
• PS3: 5.1
• PW1: 14.8
• PW2: 8.4
• PW3: 7.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380506

• Blastp: Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 25.76% of identity
• Blastx: Protein GRAVITROPIC IN THE LIGHT 1 from Arabidopsis with 25.76% of identity
• Eggnog: Plant protein of unknown function (DUF641)(ENOG410YCXF)
• Kegg: Link to kegg annotations (AT5G58960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449209.1)
• Pfam: Plant protein of unknown function (DUF641) (PF04859.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;