Ll_transcript_380279

Id TrinityTRINITY_DN51450_c2_g1_i10
Name TranscriptLl_transcript_380279
SequenceAAAGTTGATATATGCATGTGAAACACTGTGCTGTGTCTTTCTGTCACTCTCGCCGGCGCTGTCGTCGGACTTTCTCTTTTCTTCTTATCCGATCACCATA TTACTTCCACTCTTCAAACCCTATTCGTCATAGAGCGTATTTCAATTCTTGAGTTATCGATTCGAATTCTTGAGTTGTTAGGGATGGACGATTACGTCAG CACCGATGACGATTACCATTACTCCGACGACCAAGATGACTCTGCCGTCGCTTATGAGAGCGATGAAACCGATTATCAGTTGCTTACTTCCAAGGCTTCC TCTACTCAGGTGATTACAAAAGAGTCACTGCTAGCTGCACAGAGGGAGGATTTGCGGCGGGTGATGGATATGCTATCAGTGAAAGAGCAACATGCACGGA CCCTGCTTATTTATCATTGTTGGGATGTGGAGAAGTTGTTTGCAGTGTACGTGGACAAAGGGATATCACATCTCTTTGCTGAAGCTGGTGTTACCATGGA TAAACATCATCACTCTGATTCGTCATTCCGTTCTTTAATAATGTGTGAAATCTGTATGGAGGATGTTCCTATTGATGAAGCAACAGGAATGGACTGTGGT CACAGTTTTTGCAACACATGTTGGACGGAGCATTTTGTTGTCAAGATAAATGAGGGCCAAAGTAAACGCATTAGATGCATGGCTCATAAATGCTATTCCA TTTGCGATGAAGCTGTTGTAAGAACGCTGCTTGGTAGAAAGCACCCTGATATGGCCGAGAAATATGAACGCTTTCTTCTTGAATCCTACATTGAAGACAA CAAGAGAGTTAAATGGTGTCCTAGCACGCCTCATTGTGGGAATGCAATACGTGTTGAGGATGATGAATTATGTGAGGTAGAATGTTCATGTGGTTTACAA TTTTGTTTTAGTTGCCTGTCAGAAACACACTCCCCATGTTCATGTGTGATGTGGGAGCTTTGGGCTAAGAAGTGTCGAGATGAATCAGAAACTGTTAATT GGATGACAGTTCATACAAAACCTTGTCCAAAGTGCCACAAGCCAGTGGAGAAGAATGGTGGGTGTAACTTGGTTAGCTGTATATGTGGCCAACCATTTTG TTGGGTGTGTGGTGGGGCCACTGGCCGAAATCATACTTGGTCAAGTATAGCTGGCCATAGCTGTGGTCGCTACAAAGACCAAGAAAAATCAGCTGAACGA GCAAAGCGGGATCTATATCGTTATATGCACTATCATAACCGTTACAAAGCTCACACAGACTCCTTTAAGCTTGAAAGTAAACTGAAAGAGACTATACAAG GGAAGATTGATATTTCAGAAGAAAAGGATTCTAAACTCAGAGATTATAGCTGGGTAATTAATGGCCTCTCCAGACTTTTCAGATCTAGGCGTGTCCTATC ATATTCATATGCATTTGCATTTTATATGTTTGGAGATGAGCTTTTTAAGGACGAAATGTCAGAAGCTCAAAGGGAAATAAAACAGAACTTATTCGAGGAT CAACAGCAGCAGCTTGAGGCAAATGTTGAAAAGATCTCTAAAATTTTGGAGGAGCCTTTTGATACCTTTCCTGATGATAAGGTTATGGAGATAAGAATGC AGATAATCAATCTGTCGGCAGTTATTGACAAACTTTGTCAAAAAATGTATGACTGCATCGAGAATGATTTGTTGGGTTCTCTCCATCAAACTCACAACAT AGCTCCATACAAGTCAAAGGGCATAGAGAGGGCATCCGAACTATCGGTTTGGAGCAATAAAGCTAATAATACTGGTATATATCTGTTGTAGGTTTTTAAT TTAGTGCTAACAACCAAAGTTTTTGCATTAGCTAATTATGAATCAGCTAGTTTTTGATGGTTTTGATTTGTGGCAACATTCTTTTAGTACTTTATGGTTT TATGGTATTGACATATCGCATCTATAGTTGTTGTTGTGTGTCAATATTGTTTAGTTTTAGAAAGGGGAGGATTGAAGGAGGGAGAGAAAAGGCTTAGTCA GAATAATAAGGTCCCCTTTGATCTAAGAAAACATTTTCATTTTTCATATGCTACTATTGTTGACTTTGTACTTTAATACATGATATTTCATTTTCAATTT TCACTAATAATTTCCCTTCTTACCCCAATAAGAAGACTCACTCAATTATCATTATGTTGCTTATATATTTATGGGCTACAGACCTATATGTAGATAGTTG TGGTGTTCAACTGTTTCAAGCAAGAGACAGAGTAAGTTGCACTGTATAGAAAAAATATTTTGTAAGCACATTCATGAAGGGTAAAATATATGGATGAGGG ACCAGGGCCCACACTTTCCCCTCTCTCCATCCCTGCCGCTATGTGGTATTGAATATTCTTACTGGTGTATTAATTTCTTTCAGTTTACCTGGAAAAATTA TGACATGAAAATATGCTGTCAAATGTTAATTCATGTTTGAGCTTTTTTATTGCATGATGTTATGAATGTTCTTATATATCCCGGCTTCATTTTGACACTA TGGATGCTCATCAGAAATGTTAACTGAGTGAAAAGGATTATTGTGCTGCAAATGTAGGTAGAATAGCAGAAGTTGATCGGCCTTCTGGATCAGGGAGCTC AGATGACCACAAATGTTCTTCTCATAAGCGTGCTAGAACAGAAAGTGTTGGAGGTCGTGGTGGTGCCTTTTTTGATCTAAACTTGCCAGCAGAGTTTGTA GACAGAAATTGACTTTGAAGGAGGAGACCTTATATACACACAGGTGTACATGGCTAACAGAAATTGCTTTTGCTGCCTTGACCGAGTTAATCATTTTGGT CATGATATGACATCCATGGATGCAATTTACCCTCCATTTGCCTCAATCCTGCTTCAAATCCTGGGGCTGTGTATATATATATAGCCTTGAGGCATTTATT TACTAATAGTTTATGTCAAATGTGTATTTGTGTTTTGAGCACCCTGAGGACAAGTTGTAGGATGCTTTCATTGGTATCTTATGGAGTTGCAAATAAAAGT AACTTCACTGATTTTTTTTCATTGTTTTTCTCCTTCTACTCTGTTACTTTTCTCTTTAAGACAGACAATTTTCACATGAAATTTCTTTCTAAAAA BLAST
Tissuepods
Gene nameLI_gene_185015; 
Additional informationdetails; 

Expression of Ll_transcript_380279

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_380279
BlastpProbable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 68.93% of identity
BlastxProbable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 70.61% of identity
EggnogRING finger) protein(ENOG410XP9Y)
KeggLink to kegg annotations (AT4G34370)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019454167.1)
PfamRING-type zinc-finger (PF13445.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;