Ll_transcript_380272

• Id Trinity: TRINITY_DN51450_c2_g1_i4
• Name Transcript: Ll_transcript_380272
• Sequence: GAAACTCCTATTCTATGTGGGAAAGAGGAAACAATCAATTATTAATTTCTAATTATTGTGTTAGCAAAAAGGAAATTAACAAAAGCGGTAAAAGGAAAGA TTCTTTGTGTGTTTACGTATGAGACACTGTGTTCTATCTCTCACTCTCACCGGCGATATCGTCGGAATTTCCGGTTTTTTCTTACCCGATCACCAAATTA GATTCAATCTTCAACACCATTTTTGCGATACTCGCGAAAAAAGCGTATTCATCACATAAAATACCCATTCTCTTCTCATTTCTCAGTTACTGATTCCAAC TCTTAAGTGGTTAGAGATGGTGGATTACGTCAGCAGCGACGACGGTTACCAATATTCCGACGATCAAGATTTCTCTGCCGACGCTTACGAAAGCGACGAA ACCGATTATCAGTTGGTTACTACCAAGGCTTCGTCTACTATGGTGGTTACGAAAGAGTCGCTGCTAGATGCACAGAGGGAGGATTTGCGAAGTGTGATGG ACATGCTATCGGTGAAAGAGCAACATGCACGGATTCTGCTTATTTATCATCGTTGGGATGTGGAGAAGTTGTTTGCAGTGTATGCGGACAATGGGGTTGC ACATCTCTTTGCGGAGGCTGGTGTAGCTTTGGATAAACATCATCACTCTAACTCGTTAGTTCACGCTTTAATAATGTGTGAAATCTGCATAGAAGATATT CCTAGTGATGAAGCAACAAGAATGGACTGTGGTCACTGTTTTTGCAACACATGTTGGACGTCGCACTTTGTTGTCAAGATAAACGAGGGCCAAAGTAAAC GCATTAGATGTATGGCACATAAATGTTATTCCGTTTGTGATGAAGCTGTTGTAAGAACTCTACTTGGTAGAAAGCACCCTGATATGGTCGAGAAATATGA ACGCTTTCTTTTTGAATCATACATCGAAGACAACAAGAGAATTAAATGGTGTCCTAGCATACCTAACTGTGGGAATGCAATACGTGTTGAAGATGATGAA TTACATGAGGTAGAATGTGCATGTGGTTTACAATTTTGTTTTAGTTGCTTGTCAGAAGCACACTCCCCTTGTTCATGTCTGATGTGGGAGCTTTGGGCTA AGAAGTGTCAAGATGAATCAGAAACTGTTAACTGGATAACAGGTAATACAAAACCTTGTCCAAAGTGCCACAAGCCAGTGGAGAAGAGTGGTGGATGTAA CTTAGTTAGCTGTATCTGTGGCCAAGCATTTTGTTGGGTGTGTGGTGGAGCCACTGGCCGAGAACATAATTGGTCAAGTATAACTGGTCATAGCTGCGGT CGCTATAAAGACCAAAAAAAATCGGCGGAACGGGCAAGGCGGGATCTATATCGTTATATGCACTATCATAACCGTTACAAAGCTCACACAGACTCCTTTA AGCTTGAAACTAAATTGAAAGAGACCATACAAGAGAAGATTGATATTTCAGAAGAAAAAGATTCTAAACTCAGAGATTATAGCTGGGTAATTAATGGTCT CTCCAGACTTTTCAGATCTAGGCGCATCCTATCATATTCATATGCATTTGCATTTTATATGTTTGGACATGAGCTTTTTAAGGACGAAATGTCAGAAGCT CAAAGGGAAATAAAAAAGAACTTATTTGAGGATCAACAGCAACAGCTTGAGGCAAATATTGAGAAAATCTCTAAAATTTTGGAGGAGCCTTTTGATACCT TTCCTGATGATAAGGTTATGGAGATAAGAATGCAGATAATCACTCTGTCAGCAGTTATTGACAAACTTTGTCAAAAAATGTATGACTGCATCGAGAATGA TTTATTGGGTTCTCTCAATCACATTCACAACATAGCTCCATACAAGTCAAAGGGCATAGAGAGGGCATCAGAACTTTCAGTTTGGAGCAATAAAGCTAAT AATATCGTTTGACTTTGTGGATGCTCAACAGAAATGTTAACTGAGTGAAAAAGGATTATTGTATATGCTGCAAGCTTAGGTGGAACAGCAGAAGTTGATC AGCCTTCTGGATCACGGAGCTCAGATGGCCATGGATGCTCTTCTCCTAAACGTGCTAGAAAAGAAAGTGTTGGAGGAGGTACTGGTGGCAGGTTTTTTGA TCTAAACTTGCCAGCAGAGTTTGTAGACTGAAATTGACTTTGAAGGGTAGTACTTATATACACAGCTGTACATGGCTAACATAAATTGCTTTTGCTGCCT TGATGGAGTTAATCATTTTGGACATGGCATGCATGCAGCTTACCCATTTGCTTCAATCTTTCTTATTTGGCTATCTGCTGCTTAAAATCATAGGTTTGTA TATATATAGCCTTGAGGCATCTATATACACATGAAGGTAACACGTGAAGGCATCTATATAATGTTTTCATTCGTATCCTATGGAGTTGCAAGTGAAGGTA ACTTTGCTGATTTTTCCATGGTTTTGTTTCCTTACTTGGGTAATTTTCTTGTTAACTTTGCTGATGTTCTTATGACATGTCTTTTTGTAAAATAATTAGG ATACATGGTGCCTTCAACCATATTTATTTGCACACAAAAAACAAACATGTGAAGTGTCCATATTTATTTCCAGAAAAAAACCGACTAGAAGAGGT
• Tissue: pods
• Gene name: LI_gene_185015;
• Additional information: details;

Expression of Ll_transcript_380272

FPKM

• PAB: 0.3
• PNAB: 0.9
• PS1: 1.6
• PS2: 1.1
• PS3: 1.6
• PW1: 0.3
• PW2: 0.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380272

• Blastp: Probable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 64.85% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 61.21% of identity
• Eggnog: RING finger) protein(ENOG410XP9Y)
• Kegg: Link to kegg annotations (AT4G34370)
• CantataDB: Link to cantataDB annotations (CNT0000261)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454167.1)
• Pfam: IBR domain, a half RING-finger domain (PF01485.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;