Id Trinity | TRINITY_DN51453_c0_g1_i2 |
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Name Transcript | Ll_transcript_382084 |
Sequence | AAAAGATAGAAATAAGGGATATTCATTCAAAGTAGCACCCAAATCCCCAATTTCATTTGATTGAATCAGAGCTTTGCAAAATGGAAGAATACCCAGAAGA GTTACGAACTCCACCATTGACATTAACATCAATTCTTGGTTACCCACAACTTCATTCTCTCATTTCCACTCATCTTCTTTCATGTCAACCACCCATTAAC ACTTTAGCATTACCCCATTTCTCAAAAATCAATCTTTTCAACACCAAAACTCACCAATCTTATGATCCATCAACCACTCTTGTTGGTGGTATCTTAAAGC GTGATTGGTTACTCAAACATCGAACTCAGATCCCTTCTGTTGTTGCTCCCATTTTCCCTTCTCAACATGTCTTTGGTGACCCTGCTCAGTGGCTTCAATT ATGCTCCGATCTTGATTCTATCAAGACTGTGATTCATGGGAGGAACATCAAGTTGGCTGTTATAATAGTCCAGACTAACGCACAAGATGAGGTCAGTGAT GAAAGAATGATTGCCTTAAGGAAGCGAGCAGAAGTAGATGCTAAATATGTTATTACATTAAACCCAAATGACAATTCAGAACTCAAACAGTCTCTCAATA GCCTGGCAAATATATTTTCAGAATTAGCCAGTACGTATTACAGAGAAGAAGGAAGAAGGATTAAACAGCGGATAGAAAAAAAGAATGTTAGCTCGGTCGA GTTGATTGTTCGCTACTGCTTCAAAGTTGCTGTATATGCAGAATTCCGAAGTGACTGGGCTGAAGCATTGAAATTTTACCAGGAGGCCTATCATACACTG AGAGAGATTGTTGGGGTGACAACAAGGTTACCAGCAGTACAACGCTTAGTTGAGATAAAATCTATTTCCGAACAGTTGCATTTCAAGATATCAACCTTGT TACTGCATAGTGGGAAGGTTACAGAAGCACTGACATGGTTTCGCCAACACAAGAATGTGTATAGAAGGCTTGTTGGTGTTCCAGAAGCAACATTTATTCA CTGGGAGTGGATGAGCAGGCAATTTTTGGTATTTGGCGAGTTGTTGGAGACAAGTGCAATAACCACTCAAAGCTTTTCGCCTGTTGTTTCTTCATCGAAA CCTCTGTCCGATTGGGAATACTATCCAGCTTATTACTACCAATTAGCAGCTCATTACTTGAGTGAGAAGAGGGCAGCACTTGAACTTGCAATATCAATGT CAGAAACTTCTAGTGAGATTGATAGTGGTGCTGATTCAGTAGTTCCTTCAGTGTATGTGGGTCAGTTTGCTCGATTGCTGGAACAAGGAGATAATGTTGA CATGCTACCGTGAGTCTTAATTGAGTGGTAAATAAGTTCGTGTTTTGATATGTATCGTCTTTTCACGTTTTTATTTGGATTTGCAGTATCACTGATGAAG AGTACACTCGATATGCTGTTTCTGAAGGAAGAAGGTTCCGGGATTCACTTGAAATTATTGCTCTTCAAAAAAAAGCTTACGAGTCCTACAGTAGTATGAA AATTGAGAGGATGGGCTCTTATTGCGGGTTCCAGATGGCCAAGGAATACTTTACCGAAGGTGATATTAATAATGCAAAGCAGATTTTTGACAGTATTGCT AGCCTATATAGAAAAGAGGGGTGGGTAACTTTGTTATGGGATGTCTTGGGTTACTTGCGAGAGTGCTCACGGAAGAATGGCACTGTTAAAGAATTTTTGG AGTATTCCCTAGAAATGGCTGCACTACCAATAACATCTGATATTGGTGTCCAGAGAGATACTGGTCCTGCTGGTCCTGCAAATCTACTGCAAAGAGAAAC TATACAGAAGGAGGTTCTTAATCTTGTCAATGAAGCCTCAGGGTCGGCAACAAATGAAAACCTTAGCAATTTCAAGTTCAGTGGAGGTGAACCACTTCAG CTTGAAGTTGATCTTGTCAGTCCTCTTAGGTTGGTGATGTTTGCCTCAGTTGCTTTCCATGAACAGGCAATCAAGCCTGGAACATCGACTTTGATTACAG TATCACTTCTTTCCCACTTACCCGTAACTGTTGAGATTGATCAATTAGAAATCCAGTTCAACCAATCTGATTGTAATATCTTCATCGTAAATGCCCAAAA ACCTCGATTGGTAGAAGTTAGTGATATTCAACAGCATCGAGTGGAGACAGTGTCTTCTCTTTCGCTTGAATCAAACAAATGGCTAAGGTTGACCTATGAC ATAAAATCTGATCAAAGTGGAAAGCTTGACTGCCTGGTCGTTCTTGCAAAAATTGGGCCACAATTCACAATCTGCTGCAGAGCTGAAAGCCCCGCCTCAT TGGAGAGTTTACCTCTTTGGACATCGGAGGATTCTGTACAAACTGTCCCACTAAAAGACCCGGTTCTTGTGTTATCTGGTCAGAAATCTACTCAGGTTGA AGACCAAGACCCGGGAGTTGATCTGCATCTTGATGCCTCTGGTCCTGCTTTAGTGGGAGAGATTTTCATGGTACCTGTAACTGTAGTTTCCAAAGGCCAT GATGTCTACTCAGGTGAATTGAAGATCAATCTTGTGGATGTCAAGGGAGGTGTCTTGTTTAGTCCGAGAGACTCCGAACCATACTCTACAGATAGCCATC ATGTTGAGCTGCTTGGTATATCTGGACCAGAAGGGGAAGATGATTCTCAACTAGATCCTGACAAAATAAAGAAAATACAGCAATCATTTGGATTAATTTC CATCCCCTTTCTTAAAAATGGAGATTCCTGGTCTTGCAAATTAGAAATCAAGTGGCACCGACCGAAGCCTATTATGCTTTATGTATCTTTAGGTTATACT CCTTATAGTGATGAGTCAAATACACAGATGGTCCATGTCCACAAGAACTTGCAAATTGAAGGGCACGCTGCTATTGTTCTTAACCATCATTTTTTGATGC CATTTAGACGGGACCCATTGTTACTCTCAAGGAACAAGCAAGGCTTAGAGTCTGATCAGTCCGAATCACTGCCTTTAAACCAAAAAACTGTGCTCATTGT TAGCGCAAAGAACTGCACTGAGTTACCGTTAAGGTTGAAGTCCATTTCCATAGAAGCAGAGGATGATATTGGTGAAAGGACATGCTCCATTCAACATGCA AACGTGGGGCTTTCCGACCCTGCTCTTATTGTTCCCGGGCAAGAGTTCAAGAAAGTATTCTTAGTGAGTTCAGATTTGAACATATTGAAGCTCAGACTTG GAACGATGGTTTTGAGATGGAGGAGGGACTTAGGGGTTGAAGAGAAATCTGCTTCTGCGGCAAAATTGTCTTGGGCCGTGACGAAACAAAAGCTGCCAGA CATGAATGTGGAGTTACCACCATTGATTGTGAGTTTGGAATGCCCTCCTTATGCCATACTGGGAGATCCCTTTACATACTATATTAGAATTTTGAACCAG ACAGAATTACTTCAAGAAGTCAGATACTCACTAGCAGATGCACAAAGTTTTGTATTATCTGGGTATCATAATGATACTCTGCATGTTCTTCCGAAATCCG AGCACATTCTCAGTTACAAACTTGTTCCACTTGCCACAGGCATTCAACAGTTACCTAGATTTTCGATGACTTCGGTGAGATACTCAGCAGCATATCAGCC TTCAAATCCTTCAAATTCTGTTTTTGTTTTCCCTTCCAAGCCTCAATTCAAGAATGCAGCCTCAACCAACTTCAGGGTGGAATCTGTTGCTGTTATTGAA TAAAATCTTGTACATCATCAATTTCTTTGTTTAATTTTCCCCCTCTATTACAACCACCCCTGAGTTGGGTATATTACTTAGGATATTGTGGACTTGAAAT GTTTGGGTTGAAATGTTTTCTTAATACGTTTGTTGTACTAATCTGGGTTGAAAGTGCACATGCAGCCGATAACGACCAACTGTCTCAAACCATATACTGC ACCAATGATATTGAAGCAAAAATATAAAAAATAATGAATATTTAATTTTTTTTAATTGACATGAAATATTTCTGTTGGTATAG BLAST |
Tissue | pods |
Gene name | LI_gene_185028; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_382084
Blastp | Trafficking protein particle complex subunit 11 from Bos with 23.38% of identity |
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Blastx | Trafficking protein particle complex subunit 11 from Danio with 28.45% of identity |
Eggnog | trafficking protein particle complex(ENOG410XSTE) |
Kegg | Link to kegg annotations (537211) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423817.1) |
Pfam | Foie gras liver health family 1 (PF11817.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |