Ll_transcript_382088

• Id Trinity: TRINITY_DN51453_c0_g1_i5
• Name Transcript: Ll_transcript_382088
• Sequence: AAAAGATAGAAATAAGGGATATTCATTCAAAGTAGCACCCAAATCCCCAATTTCATTTGATTGAATCAGAGCTTTGCAAAATGGAAGAATACCCAGAAGA GTTACGAACTCCACCATTGACATTAACATCAATTCTTGGTTACCCACAACTTCATTCTCTCATTTCCACTCATCTTCTTTCATGTCAACCACCCATTAAC ACTTTAGCATTACCCCATTTCTCAAAAATCAATCTTTTCAACACCAAAACTCACCAATCTTATGATCCATCAACCACTCTTGTTGGTGGTATCTTAAAGC GTGATTGGTTACTCAAACATCGAACTCAGATCCCTTCTGTTGTTGCTCCCATTTTCCCTTCTCAACATGTCTTTGGTGACCCTGCTCAGTGGCTTCAATT ATGCTCCGATCTTGATTCTATCAAGACTGTGATTCATGGGAGGAACATCAAGTTGGCTGTTATAATAGTCCAGACTAACGCACAAGATGAGGTCAGTGAT GAAAGAATGATTGCCTTAAGGAAGCGAGCAGAAGTAGATGCTAAATATGTTATTACATTAAACCCAAATGACAATTCAGAACTCAAACAGTCTCTCAATA GCCTGGCAAATATATTTTCAGAATTAGCCAGTACGTATTACAGAGAAGAAGGAAGAAGGATTAAACAGCGGATAGAAAAAAAGAATGTTAGCTCGGTCGA GTTGATTGTTCGCTACTGCTTCAAAGTTGCTGTATATGCAGAATTCCGAAGTGACTGGGCTGAAGCATTGAAATTTTACCAGGAGGCCTATCATACACTG AGAGAGATTGTTGGGGTGACAACAAGGTTACCAGCAGTACAACGCTTAGTTGAGATAAAATCTATTTCCGAACAGTTGCATTTCAAGATATCAACCTTGT TACTGCATAGTGGGAAGGTTACAGAAGCACTGACATGGTTTCGCCAACACAAGAATGTGTATAGAAGGCTTGTTGGTGTTCCAGAAGCAACATTTATTCA CTGGGAGTGGATGAGCAGGCAATTTTTGGTATTTGGCGAGTTGTTGGAGACAAGTGCAATAACCACTCAAAGCTTTTCGCCTGTTGTTTCTTCATCGAAA CCTCTGTCCGATTGGGAATACTATCCAGCTTATTACTACCAATTAGCAGCTCATTACTTGAGTGAGAAGAGGGCAGCACTTGAACTTGCAATATCAATGT CAGAAACTTCTAGTGAGATTGATAGTGGTGCTGATTCAGTAGTTCCTTCAGTGTATGTGGGTCAGTTTGCTCGATTGCTGGAACAAGGAGATAATGTTGA CATGCTACCTATCACTGATGAAGAGTACACTCGATATGCTGTTTCTGAAGGAAGAAGGTTCCGGGATTCACTTGAAATTATTGCTCTTCAAAAAAAAGCT TACGAGTCCTACAGTAGTATGAAAATTGAGAGGATGGGCTCTTATTGCGGGTTCCAGATGGCCAAGGAATACTTTACCGAAGGTGATATTAATAATGCAA AGCAGATTTTTGACAGTATTGCTAGCCTATATAGAAAAGAGGGGTGGGTAACTTTGTTATGGGATGTCTTGGGTTACTTGCGAGAGTGCTCACGGAAGAA TGGCACTGTTAAAGAATTTTTGGAGTATTCCCTAGAAATGGCTGCACTACCAATAACATCTGATATTGGTGTCCAGAGAGATACTGGTCCTGCTGGTCCT GCAAATCTACTGCAAAGAGAAACTATACAGAAGGAGGTTCTTAATCTTGTCAATGAAGCCTCAGGGTCGGCAACAAATGAAAACCTTAGCAATTTCAAGT TCAGTGGAGGTGAACCACTTCAGCTTGAAGTTGATCTTGTCAGTCCTCTTAGGTTGGTGATGTTTGCCTCAGTTGCTTTCCATGAACAGGCAATCAAGCC TGGAACATCGACTTTGATTACAGTATCACTTCTTTCCCACTTACCCGTAACTGTTGAGATTGATCAATTAGAAATCCAGTTCAACCAATCTGATTGTAAT ATCTTCATCGTAAATGCCCAAAAACCTCGATTGGTAGAAGTTAGTGATATTCAACAGCATCGAGTGGAGACAGTGTCTTCTCTTTCGCTTGAATCAAACA AATGGCTAAGGTTGACCTATGACATAAAATCTGATCAAAGTGGAAAGCTTGACTGCCTGGTCGTTCTTGCAAAAATTGGGCCACAATTCACAATCTGCTG CAGAGCTGAAAGCCCCGCCTCATTGGAGAGTTTACCTCTTTGGACATCGGAGGATTCTGTACAAACTGTCCCACTAAAAGACCCGGTTCTTGTGTTATCT GGTCAGAAATCTACTCAGGTTGAAGACCAAGACCCGGGAGTTGATCTGCATCTTGATGCCTCTGGTCCTGCTTTAGTGGGAGAGATTTTCATGGTACCTG TAACTGTAGTTTCCAAAGGCCATGATGTCTACTCAGGTGAATTGAAGATCAATCTTGTGGATGTCAAGGGAGGTGTCTTGTTTAGTCCGAGAGACTCCGA ACCATACTCTACAGATAGCCATCATGTTGAGCTGCTTGGTATATCTGGACCAGAAGGGGAAGATGATTCTCAACTAGATCCTGACAAAATAAAGAAAATA CAGCAATCATTTGGATTAATTTCCATCCCCTTTCTTAAAAATGGAGATTCCTGGTCTTGCAAATTAGAAATCAAGTGGCACCGACCGAAGCCTATTATGC TTTATGTATCTTTAGGTTATACTCCTTATAGTGATGAGTCAAATACACAGATGGTCCATGTCCACAAGAACTTGCAAATTGAAGGGCACGCTGCTATTGT TCTTAACCATCATTTTTTGATGCCATTTAGACGGGACCCATTGTTACTCTCAAGGAACAAGCAAGGCTTAGAGTCTGATCAGTCCGAATCACTGCCTTTA AACCAAAAAACTGTGCTCATTGTTAGCGCAAAGAACTGCACTGAGTTACCGTTAAGGTTGAAGTCCATTTCCATAGAAGCAGAGGATGATATTGGTGAAA GGACATGCTCCATTCAACATGCAAACGTGGGGCTTTCCGACCCTGCTCTTATTGTTCCCGGGCAAGAGTTCAAGAAAGTATTCTTAGTGAGTTCAGATTT GAACATATTGAAGCTCAGACTTGGAACGATGGTTTTGAGATGGAGGAGGGACTTAGGGGTTGAAGAGAAATCTGCTTCTGCGGCAAAATTGTCTTGGGCC GTGACGAAACAAAAGCTGCCAGACATGAATGTGGAGTTACCACCATTGATTGTGAGTTTGGAATGCCCTCCTTATGCCATACTGGGAGATCCCTTTACAT ACTATATTAGAATTTTGAACCAGACAGAATTACTTCAAGAAGTCAGATACTCACTAGCAGATGCACAAAGTTTTGTATTATCTGGGTATCATAATGATAC TCTGCATGTTCTTCCGAAATCCGAGCACATTCTCAGTTACAAACTTGTTCCACTTGCCACAGGCATTCAACAGTTACCTAGATTTTCGATGACTTCGGTG AGATACTCAGCAGCATATCAGCCTTCAAATCCTTCAAATTCTGTTTTTGTTTTCCCTTCCAAGCCTCAATTCAAGAATGCAGCCTCAACCAACTTCAGGG TGGAATCTGTTGCTGTTATTGAATAAAATCTTGTACATCATCAATTTCTTTGTTTAATTTTCCCCCTCTATTACAACCACCCCTGAGTTGGGTATATTAC TTAGGATATTGTGGACTTGAAATGTTTGGGTTGAAATGTTTTCTTAATACGTTTGTTGTACTAATCTGGGTTGAAAGTGCACATGCAGCCGATAACGACC AACTGTCTCAAACCATATACTGCACCAATGATATTGAAGCAAAAATATAAAAAATAATGAATATTTAATTTTTTTTAATTGACATGAAATATTTCTGTTG GTATAG
• Tissue: pods
• Gene name: LI_gene_185028;
• Additional information: details;

Expression of Ll_transcript_382088

FPKM

• PAB: 3.1
• PNAB: 13.1
• PS1: 13.8
• PS2: 10.7
• PS3: 12.3
• PW1: 9.4
• PW2: 10.5
• PW3: 7.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_382088

• Blastp: Trafficking protein particle complex subunit 11 from Bos with 24.76% of identity
• Blastx: Trafficking protein particle complex subunit 11 from Bos with 24.76% of identity
• Eggnog: trafficking protein particle complex(ENOG410XSTE)
• Kegg: Link to kegg annotations (537211)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423817.1)
• Pfam: Foie gras liver health family 1 (PF11817.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;