Id Trinity | TRINITY_DN51453_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_382089 |
Sequence | AAAAGATAGAAATAAGGGATATTCATTCAAAGTAGCACCCAAATCCCCAATTTCATTTGATTGAATCAGAGCTTTGCAAAATGGAAGAATACCCAGAAGA GTTACGAACTCCGCCATTGATATTAGCATCACTCCTTGGTTGCCCAGAACTCCATTCTCTCATTTCCACTCACCTTCTCTCTTTTCAACCTCCCATTAAC ACTTTACCCATTCCCCATTCCTCCAATCTCAATCTCTTCTCTCTCAAAATTCAACCTTCTCATCATTCCTCCATTGCTTTTGCCGGTATCTTAAAGCGTG ATTGGTTACTCAAACACCGTACCCAGATCCCTTCTCTTCTCGCTGCCCTCTTCCCTTCACATCTTCTATTTGGTCTTAATGATCAATGGCTTCAACTTTG CTCTGATCTTGATTCCATCAAGTATCATCTCATTCTTTTCTTTTTTAATATTTGTCGTAACCGTAAGGTTGTTTGTCTTATAGACTCTGGGTTCAAATTC CGGAAACAGACATAATAAGAGTCATATCCTCTATGGGTGGGGTCCACTAAGTGAATCCTATTGGTGAATTAGTTCTCTTGATTCCATCAAGTATCATCTC ATTCTTTTCTTTTTTAATATTTGTCGTAACCGTAAGGTTGTTTGTCTTATAGACTCTGGGTTCAAATTCCGGAAACAGACATAATAAAAGTTATATCCTC TATGGATGGGGTCCACTAAGTGAGAGTCTAGTATACTCATGATCCTATTGGTGAATTAGTTCTCTTGATTCCATCAAGTATCATCTCATTCCTGTTTTTT TTAACATTGTCGTAACTGTAAGGTTGTTTGTCTTAGACACTGAGGCATATGTGGTGAGTTCAAATTCTGGAAACAGATATAATAACAGTTATATCCTCTA TGGGCGGGGTCCACTAAGTGAGAGTCTAGTATACTGATCATGTATTAGGGACTAATATCACTTGGGCTTATATTTTTGGAGTCTGAAATAAATATTTGTT AAAATCAGGGAACTAATGTGATTTGTGCACTGAAAATTCACTGAATGAAATGGTGGTTTTCCCTTTTATAAAAAAATTACAAATTAAAATCTGTTTGTGA GTTGTGTTTTGGAGGGAAATGGAAGGCTTTAGAGTCATTTCGCAAATGTATTTTGCGGCTATGAAACAATATAAGGCTTTAGAGTCATTTCGCAAATGTA TTTTGCGGCTATGAAACAATATAAGGCTTTAGAGTCATTTCGCAGATATATTTTGCGGCTATGAAACATTATAAGGCTTTAGAGTCATTTTGCAAATGTA GTTTGCGGCTATGAAACATTATTTTTCCCTTCCTCCCCTCCAAAATCCAACTCGCAAACAGACGCTAAGTTGTTGACTTGGTTTTGAATGTCGAGTTTGT ACTTGTTGGTTTTGAATGTCGAGTTTGTACTTGTTGGTCTTGAATGTGGGATTTGTACTTGTTGGTTTGTTTGTTGCAGGAATGTGATTCGTGGGAGAAA CATCAAGTTGGTTGTCGTAATCGTCAACACTAATGCTCACGAGGAGGTCATCGATGATAGAATGATTGCCTTAAGGAAGCGAGCGGAAATAGATGCTAAA TATGTTATCACATTAAACCCAAATGACAATTCCGAACTCAAACAGTCTCTCAATAGCCTGGCAAATGCATTTTCAGAATTAGCCAGTATATATTACAGAG AAGAAGGAAGAGGGATTAAACAACGGATAGAAAAGAAGTCTGTTAGCTCGGTCGAGTTGATTGTCCGCTACTGCTTCAAAGTTGCTGTCTATGCAGAATT CCGAAGTGACTGGGCTGAAGCATTGAAATTTTACGAGGAGGCCTATCATACATTGAGAGAGATTATTGGGGTGACAACAAGGTTACCACCAGTACAACGC TTGGTGGAGATAAAATCTATTTCCGAACAGTTGCATTTCAAGATATTGACGTTGTTACTGCATAGTGGGAAGGTTACAGAGGCTGTGACATGGTTCCGTC AGCACAAGAATGTATATAGAAAGCTTGTTGGTGCACCAGAAGCAACATTTATTCACTGGGAGTGGATGAGTCGACAGTATTTGGTTTTTGGTGAATTGTT GGAGACAAGTGCAATAACCACTCAAAGCTTTTTGCCTGTTATTTCTTCAACGAAACCTCTGTCTGATTGGGAATATTATCCGGCTTTTTACTACCAATTA GCAGCCCACTACTTGAGTGAGAAAAGGTCAGCACTGGAACTTGCAATCTCAATGTCAGAAACTTCTACTGAGATTGATAGTGGTGCTGATTCAGTAGTTC CTTCAGTGTATGTGGGGCAGTTTGCTCGGTTAATCGAGCAAGGAGACAATGTTGACATGCTACCTATCACCGACGAAGAGTACACTCGCTTTGCTGTTTC TGAAGGAAGAAGATTCCGCGATTCACTTGAAATTATTGCTCTTCAAAAAAAAGCTTATGAGTCCTACAGTAGTATGAAAATTGATAGGATGAGCTCTTAT TGCGGGTTCCAGATGGCCAAAGAATACTTTATCGAAGGTGATATTGATAATGCAAAACAGGTTTTTGACGGTATTGCTAGCCTATATAGAAAAGAGGGGT GGGTAACTTTGTTATGGGATGTCTTGGGTTACCTGCGAGAGTGTTCACGGAAGAATGGTGTTGTTAAAGATTTTGTGGAGTATTCCCTTGAAATGGCTGC ACTGCCAATAACATCTGATATCGGTGTCCAGCGAGACACTGGTCCGGCTGGTCCTGCAAATCTACTGCAAAGAGAAACTATACACAAGGAGGTTTTTAAC CTTGTCACTGATGCTGCAGGATTGGCGACAAATGAACACCTTAGTAATCTGAAGTTTACCGGAGGTGAATCACTTCAGCTTGAGGTTGATCTTGTCAGTC CTCTTAGGTTGGTGATGCTTGCATCAGTTGCTTTCCATGAACCGGCAATCAAGCCTGGAACATCAACTTTGATTACAGTGTCACTTCTTTCCCACTTACC CATAACGATTGAGATTGACCAATTAGAAATCCAGTTCAACCAATCTGATTGTAATTTCTTCATCGCAAATGCCCAAAAACCTCGATCAATAGAAGTCAGT GACGTTCAACAGCATCGAGTGGAGACGGTGCCTTCTATTTCGCTTGAATCAAACAAATGGCTAAGGTTGACCTATGACATAAAATCTGATCAAAGTGGAA AGCTTGACTGTCTGGCTGTTCTTGCAAAAATTGGACCACACTTCACAATCTGCTGCAGAGCTCAAAACCCTGCCTCATTGGAGAGTTTACCCCTTTGGAC ATTGGAGGGTTCTGTACCGAGTGTTCCGCTAAAAGATCCGGTTCTTGTGTTATCTGGTCAGAAGTCTATCCAGGTTGAACAACAAGACCCAGGAGTTGAT CTGCATCTTGATGCCTCTGGTCCTGCTTTAGTGGGAGAGATTTTCTTGGTACCTGTAACAGTGGTCTCCAAAGGCCATGATGTCTACTCGGGTGAGTTGA AGATCAATCTCGTGGATGTCAAGGGAGGTGTCTTGTTTAGTCCGAAAGACTCTGAACGATACTCTACAGATAGTCATCATGTCGAGCTGCTTGGCATTTC TGCACCAGAAGGGGAAGATGATTCTCAATTAGATCCTGACAAGATAAAGAAAATACAGCAATCATTCGGATTAATTTCTATTCCCTTTCTTAAAAATGGA GACTCCTGGTCTTGCAAGCTAGAAATCAAGTGGCACCGACCGAAGCCTATTATGCTTTATGTATCGTTAGGTTATACGCCATATAGAGATGAATCGAATA CACAGATGATCCACGTCCACAAGAACTTGCAAATTGAAGGACACACTGCTATCGTTCTTAACCATTATTATTTGATGCCGTTTAGACGGGACCCATTGTT ACTCTCAAGGAACAAGCAAGCCTTAGAATCTGACCAGTCAGAATCACTGCCTTTAAACCAAAAAACTGTGCTCGTTGTTAGTGCAAAGAACTGCACGGAA TTGCCGTTAAGGTTAAAGTCCATTTCCATAGAAGTAGAGGGTGATGATGTCGAAAGGACATGCTCCATTCAACATACAAATGCGGAGCTTTCTGAGCCTG CTCTCGTTGTTCCCGGGAAAGAGTTCAAGAAAGTATTCTCAGTGAGTTCCGATATGAACATTTCGAAGCTCAAACTTGGAACTGTGATCTTGAGATGGAG GAGGGACTTAAGGGTTGAAGACAAATCGGCTTCCGCTACAGCATTATCTTGGGTTGTGACTAAACAAAAGCTGCCGGATATGAATGTCGAGTTACCACCA TTGATTGTGAGTTTGGAATGCCCCCCTTATGCCATATTGGGAGATCCCTTCACATACTATATAAGAATTTTGAACCAAACACAATTGCTGCAAGAAATCA AATACTCACTAGCAGATTCACAGAGTTTTGTATTATCTGGGTATCATAATGATACTATACATGTTCTTCCCAAATCTGAACACATTCTGAGTTACAAACT TGTGCCACTTGCCTCAGGTATTCAACAATTACCAAAATTTTCCATGACTTCAGTGAGATACTCATCAGTATATCAGCCTTCAAATTCTTCAAATTCTGTT TTTGTTTTCCCTTCCAAGCCTCAGTTCAAGACTACAGACTCAACTAACTTCAGGGTCAAGTCAGTTGCTGCTAATGAATAAATCTTAGAGTAAAAACCTA TTTTGGTCTCCGAAATTTTTTGCATGTACCAATTTGATCCTGAAAATATTGAAAACCCGGAAATGGTCCTCATAATAATCAAATGTGTGTCAAATTAGTC AATTTTAACATATTTTATAATCTTTGGAAGAGACTATTTTGACTCACATTTTCGATTTTTTTATACGAATTTGGATTTTTTATTTTTTGGAGGTTAGAAA ATTTATAAGATTAAATTGAATATTTTGCTAGTATATTATTGATTCTTTCAATTAGATTATACATTATATATTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_185028; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_382089
Blastp | Trafficking protein particle complex subunit 11 from Bos with 25.75% of identity |
---|---|
Blastx | Trafficking protein particle complex subunit 11 from Bos with 25.75% of identity |
Eggnog | trafficking protein particle complex(ENOG410XSTE) |
Kegg | Link to kegg annotations (537211) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421004.1) |
Pfam | Foie gras liver health family 1 (PF11817.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |