Id Trinity | TRINITY_DN51455_c0_g1_i15 |
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Name Transcript | Ll_transcript_380800 |
Sequence | GCCAGCAACATAATCATCATTCCCGTTTATCTTCTTTCCCCATTCATTTCGTTAAACCCTATAAAACAAAATCTCTCCAACGACGTTGTTTTGGAGCGAA CAATGAACACTTTCACCCTCACCCCTTCTTCTTCTTCCCACACCCACCGCCCCTTTCTTCTTCCCTCTCCCTTACTCAACCCTACCCTCACTCAGCGACG TCGTTTTAGGCTCCCCTACCCTCGTTGTTCCTCTACCTCCGATCAAGACCGCGCTACCTCTTTGCCGCCACCGCGAGCTCCGAAGGAGCTCAAGGGAATT GAAATTCTAGTCGATAAGCTTTCGCCACCGGCGAGGCTAGCCACTTCTGCCGTCGTCCTTGCTGGCGCTGTCGCCGCTGGCTATGGTCTTGGATCACGGT TTGGCGGTTGCCGGAACGCAGCAATTGGAGGGGCTGTAGCTCTTGGCGTGGCCGGTGGTGCGGCGACTTATGCATTAAACGCGGCTGCTCCGCAAGTGGC AGCTGTGAATTTGCATAACTATGTTGCCGAGTTTGACGACCCGGCTAAGTTGAAGAAGGAAGATATTGAATCCATTGCGAACAAGTATGGTGTTAACAAG CAAGACGAGGCGTTTAAAGCTGAGATTTCTGATATATATGCTGAGTTTGTGTCTTCTGTGCTTCCTCCTGGTGGGGAGGAACTTAGAGGGGATGAGGTTG ATAAGATCGCCAATTTCAAAAATTCTTTAGGAATTGATGACCCTGATGCAGCTGCTATGCACATGGAGATTGGTAGGAGATTTTTTAGGCAAAGGCTGGA AGTTGGGGATCGCGAGGCTGATATTGAGCAACGCCGGGCATTTCAAAAGTTGATATATGTGTCAAATCTTGTATTTGGAGAAGCGTCATCTTTCCTTCTT CCCTGGAAGCGTGTTTTCAAGGTTACTGATTCCCAGGTTGAAGTAGCTATACGTGACAATGCCCAACGGTTGTATGCTTCCAAGCTGAAATCAGTTGGAA GAGATATTGATGAGGGGCAACTTGTTAGACTTCGAGAAGCACAACACTTGTGTCGCCTTTCTGATGAGCTTGCTGAGAACTTGTTTAAAGAGCATGCAAG AAAATTGGCCGAGCAAAATATTTCAGCGGCGCTTGTTATGCTTAAATCTCGCACAAGAGCTGTTCCGGGAGTTAACCAAGCAGTTGAAGAGCTGAATAGC TTATTGGCATTCAATAATTCACTCATCTCATTTAAGAACCACCCAGATGTGGATCGGTTTGCCCATGGTGTTGGTCCAATTTCTTTAGGGGGTGGTGAGT ATGATGGAGACAGAAAGATAGAGGACTTGAAACTCCTTTACAGGGCATATGTTTCAGATAGTTTGTCTGGGGGGCGCATGGAAGACCATAAGCTAGCTGC ACTTAATCAGTTAAGAAATATATTTGGGCTGGGTAAACGTGAAGCTGAAGTCGTTTCACTGGATGTTACATCCAAGATATATCGTAAACGACTTGGACAG GCTGTTTCTGGCGGTGAGTTAGAATTGGCAGATAGCAAAGCAAAATTCCTGCAAAATCTATGTGATGAATTGCATTTTGATCCACAAAAGGCCAGCGAAC TTCATGAAGGTAGACCTTGTTATGTGACATCTTTTGTTATGTTTACAGCTAGTTGAAATTTTACCATATTTAAAGCTTGGATTAGTCAACATTTATTTGT GTGATTCTCAACAATAATATTCAGTTATTGATCTGTTTCTTAGTTGTTCTAATTGTTAACTTTTTGTATTACGTGTCTTTTATCTTTCTTTACATTGTAT TTAATTCATTAAAAGTTGAAAACACAATCTAACGATAGTTTGTTTTTAAGAAATTTACCGGCAAAAGCTTCAGTGTTGTGTAGCTGACGGGGAACTCAGT GAGGAGGATGTTGCTGCTTTGTTGAGGCTGCGTGTAATGTTATGTATACCTCAACAGACCGTGGAAGCTGTTCACTCAGACATCTGTGGCAGTTTGTTTG AAAAGGTTGTCAAGGAAGCAATTGCGTCAGGGGTTGATGGATACGATGCTGATATCAAGGAATCTGTAAGAAAATCAGCACATGGCTTGCGACTTACCCG GAAGACTGCTATGTCTATTGCCAGCAAGGCAGTAAGGAAGATATATATTAATTACATAAAACGTGCACGAGCAGCTGGAAGTCGTACAGAGTCTGCAAAA GAACTGAAGAAGATGATAGCTTTTAACACCTTGGTTGTGACTGAGTTGGTGGAGGACATTAAAGGAGAGTCCGCTGATGTTTCAACTGAAGAACCTGTGA AGGAGGTGGACATCACACAAACAGTAGATGAAGATTGGGATTCACTTCAGACACTTAAGAAAATAAGACCCGACAAAGAACTTATAGCAAGGATGGGAAA GACTGGTCAGACGGAAATTACTCTTAAAGATGACCTTCCGGAAAGGGACAGGACTGATCTTTACAAGACATACTTGCTTTTCTGTCTAACTGGTGAAGTG AAAAGGGTTCCATTTGGTGCCCAGATTACTACAAAGAAGGATGATTCAGAGTATGTTCTTCTAAACCAGCTTGGTGGGATCCTGGGATTGACTGGTAAAG AAATAGTGGAAGTACATAGGGGTCTAGCTGAGCAAGCTTTTAGGCAACAAGCAGAGGTCATTTTAGCTGATGGACAGTTGACAAAGGCGAGGGTGGAGCA GCTTAATAATCTGCAGAAGCAAGTGGGTTTACCTCAAGAATATGCTCAGAAAATAATCAAGAGTATAACTACTACAAAAATGGCAGCTGCCATTGAAACT GCTGTAACTCAAGGGAGACTTAATATTAAGCAGATAAGGGAACTTAAGGAATCCAATGTTGATTTAGACAGTATGATATCTGGGAGCTTGAGAGAAATGC TCTTCAAAAAAACAGTTCATAATATATTTTCATCTGGTACTGGAGAGTTTGATGAGGAAGAAGTATATGAAAAAATCCCAGCAGATCTCAACATTAACAA AGAGAAAGCTAGAGGTGTTGTTAGTGAACTTGCAAGAAGTAAACTATCTAATGCACTCATTCAGGCAGTGGCTCTATTAAGAGTGAGAAATCATCAGGGT GTGGTTTCCTCCCTCAATGATTTGCTTGCTTGTGACAAAGCAGTACCCTCACAACAACTCTCATGGGAAGTGTCAGAGGAGCTTGCTGATCTATACACTA TATACTTGAAGAGTGATCCAACACCCGCGAAATTGTCCCGTTTGCAGTATCTGTTGGGCATAAATGATTCTACAGCTTCTGCTCTTCGGGAGAGGGGTGA TAGATTACTTAATAATACTGCAGAGGAAGAGGAGTTTGTATTCTAATGTCTTGGAATAAGATTTTCGGCATTAGGCTTATTGGGGAGGCTATGAGCCCTC ACCATAAGCCATTTTTAATCTGCCATTTTGTTTAACGGGGAAATAGAAAAAGGAATATGTTCCTTGTAATAGATATGAGTGCATTTTTAGAGGGTTGATA TCTCAGATAACCATTGTATTATGTGGTGTGACAATTGATTTAATCGGTTGCTCTTTTTTAGCCATAACATACCCTGTGGCTAAGGGCAAGTTTAGTCTGA AAGAGTGCCTCAAAATTACCATGAAAAAATGAGATGCAAAAGATTCTCTATGCATCCGTAATAGGAAGTGTAATTTACGCTCAAGTTTGTATATGTCCTC ACATAACATTGGTGGTAGGAGTTTTAGGCAAATTTAAGTAACCTTGGAATGCTCCCTTTTAAGGCATACAATTGTGTGATGCATGACTTGAATAGAATAA CGTGTACATACTCACTTATTGAAAGTCTAATAGTTTAGATATTATTGGATACCTTGACTCCGATTTACGATATGTCAAGACAATAATTGCTCCACATGTG GGTATATTTTTATGCTTGTTGGAGGCGTTCTCTCTTGAAAGTCTGCTGATACTTAAATTTCCTTTAACACTGAATGTGCATGGAGTTTATGATTTGTT BLAST |
Tissue | pods |
Gene name | LI_gene_185041; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380800
Blastp | Protein TIC110, chloroplastic from Arabidopsis with 73.89% of identity |
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Blastx | Protein TIC110, chloroplastic from Arabidopsis with 74.4% of identity |
Eggnog | translocon at the inner envelope membrane of chloroplasts 110(ENOG410XRW7) |
Kegg | Link to kegg annotations (AT1G06950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432221.1) |
Pfam | Chloroplast envelope transporter (PF16940.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |