| Id Trinity | TRINITY_DN51476_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_380614 |
| Sequence | AATAAATTGAGTTTGACATTTTTAATGCTATGCACCTACCAAAGGACAAGGGGCAATGTTTACAAATGAACGTAATTAATGAAATCTGTGCAGAACTTCC CTCACTGACGAACCTTTGGAGGTGAAAGAAAATGTTGAAGAACAAATCATCCAAAATTTCACGGATGAATTGTTCTTTCAAAATCCGAACGGACCAACCG AAAAAAAACCAGAGCTGGAACTAAAAGAATTACCGTCACATCTGAAATACATATTTTTAGACGGTAATTCCAACAAACCAGCAATCATCAACAACATGCT ATCTGATTCGGAAGAAAAGAAACTTATACAGATCTTAGAAGCGCATCAAGGGACATTAGGGTGGATAATCAATGATCTAAAAGGCATCAATCCATCATAT TGCATGCACAAAATTATGATGGAAGATGAATACAAACCCTGTGCTCAGCCCCAACGATGATTGAATCCACCTATGAAAGAAGTGGTAAGGAAAGAAATTG TAAAAATGCTTGAAGTATGAATGATCTATCCCATTTCAGACAACAAATGGGTAAGTCTTGTTCAAGTAGTGCCGAAAAGAGGGGGAATGACGGTATCAGA AATGAACAAAATGAACTCATTCTAACCAGAGTTGTTATTGGTTGGAGAGTATGCATAGATTACCGAAAACTCAACGCGACCACCAGAAAAGACCATTTTC CTCTACCATTCATGGATCAAATGTTGGAGAGATTAGCTGGAAAGGCGTTCTACTGTTTCCTGGACGGGTACTCCGGATATAATCAAATTGTTGTTGATCC TCTGGACAAAGAAAAGACAGCATTTACTTGTCCATTTGGTATTTATGCATATAGGAAAATGTCATTTGAACTATGTAATGCTCTTACAACTTTTCAAAGA TGCATGTTGGCTATCTTCGCTGATTTAGTGGAGAAATGCATCGAGGTCTTTATGGATGACTTTTCAGTATTTGGAGATTTGTTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_185189; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_380614
| Blastp | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 43.75% of identity |
|---|---|
| Blastx | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 43.75% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YIL082W-A) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462960.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |