Ll_transcript_381765

• Id Trinity: TRINITY_DN51477_c11_g1_i3
• Name Transcript: Ll_transcript_381765
• Sequence: ACCACTAATAGGTAACCACATGTGAGGTCGCTACTCATTAATGATATGAATAACAGAAGGAAAAGAAATAATAATGATTTGAATCGTCGGTGCGAGTGAA CTAGCACAAGCCACCATAAAAATCGGTATCGTACAACATTATCAATATCACATACCATTATCAATATCACATAGTAACATGCACTCTCAATAGTCAACAC TGAATAATTCTAATTCCAAATAATATTCTGTGAGAGAGTTAACGTGAAATATCTATCAATCAATTATGGATGGTTTGATCAAGGGCTTAGTCGACGTCGC TCTCGGTGGTAATCGCAACCACCACGACGGCGATAACAACGACGAACAACGCGATGAACGGTCCAGATCTTCTTGGGCTGAGATCGTTTCCGGAGAAGAA GATCACCCTACCCCACAGGACCGTGAAGATGGGGAATGGAAACACCAAGGTTCCAGAATTTCCAACACTTCCTACAAGCAGCAAGAAGAAGAACAGTGGC AAGATGATACTTATAGGACGACTTCACACACCAGGCCTCATCAGGAACAATATCGTCCTAAGCAGGGGGATTTGGAATCTGAGAGTTTCAACACTTCCAA CAGACCCCACAAGTCAAATGAAGATAACAATGATGGATGGCAGACTGTTGGTGATAAACATTCAAGGCAGCAACACAAGGTTCCAAAGGATAACTGGAAC CAATATAAACTACCTTCTGATGAACAACAATACTCTAGTGAGGTTGAGGTTGGTGGTAGTGTGGAGCCTTCAGAAGATGAACTTACTGATTTATCACGAG CTTGTGAAAAACTCTGGGATCTTGATTTAAATCGTTTGGTACCTGGCAATGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGTTTTCCAAAAGGATGA TATGGCACAAGGAAGCTTGTTCACTTGGGTTAATGATGACGTATTCAGAAAGCCTACTTTTTCTCGGTTTCTTTCGCTTTTAGATAATTACAACCCACAT CAAGGAAGTAAGGAAGTTGTCACCTCCGAAGAGAAGCAAGAGCAAGCCTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGT ATCTTGCATCCAAGGGAATTGCTTCAGGGAGCTACCAAGATTTCAAAAGAATGATGACTAGTCTGTGGTTTGATCTTTATGGTCGTGGTGGAACTTCTGG TTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATTAAACAAAACAATCAAGTTTCTGGCTTTCATAACTGGCTTCAGGTGAGACCCCCCGCTTCC TTTTTCTGCCTGTTAGGATCCATTTGGGTACGGGCAAACATTGTGGGTGGTGGAGGCAGTTGCCCTCACTGGAATTTAAACTTTTCTTAATATAATTATG TATTATTTGTGCAAATTTCCCCATGACATAGTAGTAATGTGTTATATTTATTGAACCATAATCATCAAAGCCATCAAAAGCATAAGATGATTGAAGACAA AAGGATTAAAGTAGCTTAAAGTAAGCACAAATTTGTAGTTGTAATTTAGTGATGTATTAGTTGAAGGATAGGTTGTTGTTTTTATCCTTTTTAGTTTCTA GTCGATCACATGTAACTTGAGGTACTTAGTTGATTTAGTTGGTTAACAAGTTAGTTATCAGAGGGGCAATTGGTACCACCAAGGTATTGATCTAGTGGTG TAAGGTTCAATTTGATCCCTAGATAGACCAAAAAGTCAAAGGTTCGATTCTAGGGAGAAACACTTGTTGGAAGGGGCAGCCACACATCCCGAAGGGGTTC CTTACTCATAGGGTGTGGCATACCCTTGATTATACCCAAAAAAATGGGCAATTGGTTGCTTCCAAAACAAGTTACTTGGTTCATTGTATATATACCAATT CACTTGGCTGATTTCTTCAATAGAATGAATTCTACAATTTCCACAAACACTTTCAATATTTTAATTCTACATGTTTATGTGTATGTTGCCCCTATAACTT AAAATTTCTGAATCCACAGCTTGATCTATTGGAAACTCATGCCAAATCGAAGGTGTATTAACTTATTGAATGTCAAATTTGTAGCTCTTCTCAGCCATCA TTCTTATATTACTACCCTCACTGATCATGCAATTACTATATTGTGAATCTTCTTGCCCCAGCTAGTAGTATCGCAAACCTAGCTACTAGCTACATGTAGA CTAGCTTCATAGTTGATATTGCTAATAATACTTTGCAGCGATCTTATGTTTTCAATAATTTTCCCAACCACCTGTTATATGTACAAGTCCTTATTCAGAC CAGGTAGTTCCTTTTTTCCCTTAACCTTCTACCCTGCTTCTTTCTAATAATATTATAGATGAAACTTAGGTGTTATTTTTAGGTATTTGTGATCCAATAA AAACATTACATGTATAACATCTCTTCCACATATTCTATATTGTATGTTTAATGGAAAACACCACCAAAAGCATCCCAAGAACAACACATAGGTTTTGTTA TAATATTATGTATTCTAATTTGTGTAGTGATTGATCTATTAAATAAATAGATGTTGGGTTACATGGATATGTTTTGTTTCTTTAACTAGTAATATGAGTT TATCTTGTCATCGTGTGAAACTGTTATCTTACTGATGTATTTTGCAGTTTTACCATGAAGAAGCGAATGGGAGAGTTGATTATCAAGGCTATATCTTTCC CCGTCGGAGGGGAGAAATTCCGGACTCTGAAACGCAGCTTCTGACAATTCAGTTTGAATGGAATGGTGTTCTGAAATCTGTTTCAAGCACTTTGATTGGA GTTAGCCCTGAGTTTGAAGTTGCTTTGTATACCCTGTGTTTCTATGCTGGTGAAGAGGATAATCAGATTCAGCTTGGTCCATATTCAGTTAATATCAAGT GCTATCATCTTGGAGATAGAATTGGATCTGTTTTCCCCATTTCAGATTCTTGAATTTTCAGTTTCTACATATGATTGTATTTGGAGTTAACACATGTATC TTTGAAAGACCTAAGTGATGATTAAGTCTTGTATTTGTGCCCAATAATTCATGTCTTATGTAAGCAATATCATTTAGTTTAATTATTACATGTTAGCACA TTATTGAGAGAATTATGCACTTATTTGATGGCTCTGTCTAGTATAAAAAAATTCTTGTGCAACATGTTTTGCTTTTCTTATACTTTAAGTAAAAGTTCTC CT
• Tissue: pods
• Gene name: LI_gene_185196;
• Additional information: details;

Expression of Ll_transcript_381765

FPKM

• PAB: 10.4
• PNAB: 21.3
• PS1: 12.6
• PS2: 7
• PS3: 12.4
• PW1: 20.1
• PW2: 17
• PW3: 8.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381765

• Blastp: Poly(U)-specific endoribonuclease-B from Danio with 42.69% of identity
• Blastx: Poly(U)-specific endoribonuclease-B from Danio with 42.69% of identity
• Eggnog: Poly(U)-specific(ENOG410XX8E)
• Kegg: Link to kegg annotations (553584)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446016.1)
• Pfam: Endoribonuclease XendoU (PF09412.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;