Ll_transcript_381547

• Id Trinity: TRINITY_DN51478_c0_g1_i4
• Name Transcript: Ll_transcript_381547
• Sequence: AATTCTGAACTTTACTTCTCCCCTCTCTCCAAAAAGCTACACCCTTTTTTTCTCTCTAGTTTTTCTGTGTCCCAAAGGTTTCAAACTGAGATAAGAAGAA TAAGAACAACAACGTATAAAAAAGATTTGAAAGGGATAAACAAATGATGGACGGATATTCTGGTAAAAGATCTACCGGTGGGGTGGTAGTCCCTAGAAAG GGGGTGGGACATGTCTTCAAAGATACTGCTAATACTAGAGATCGTAATAGTCCAGCTTGCAGTCGCCTTGGTTGCAGTAAAAGAGTCAACTCTCCTAAAG GTGCTCAAATTGGTTCTTCTGAGAAAGGTAAATCATTGAAGCCTTCAACACGATCCTCTGCCAGTGGCAAGGAAGCAATTGGAAGTTCCTCTAGAACTTT CATAGGGAGTAGTAGCCCAGGGAAAGCCCTTCTAAGGCCTCGGAAAACATTGTCCTCTCAGTTAGAGGCAGATTCATCTGAAACAAGTAGCATACAGGAT GAACCAGAAGCTTCAAATCTCATCCCTCCACCTGAAAAGATTAAGAGAGAGCTTCAAGCAGAAGTGGAAAGTGTGGACTCTGGTAATGTCATGCCGATGG AAGTAGGGAGCTCCAGTGTAGCATCTAATACAAAATCTCGGAGGAGTTTTCATCCTAAACCTGGATTGCGTGGTCAAGAAGTTAAAAGCAATGTTCCAGT TATACGTGCTGGTGCCAATAGTTATGGGTTGAGGAGCCTCAGATGCAACTCTGTATCAGATGTCATCCCAGCTGGCGGTTGTTCATCATCTGATTCAACC CTTAACCGACGGAAGAATATGATAAAAAAGAGAAATTGTGAAGGGGAAAGCAGTTCCAGTGCTAGAGGGAAGAACATGAGTGGGCCTTCATTTGAAGGAC GGAATTCTGGTTCCAGAAATGGCATATCCATCTCTGATTCAAGAAGATCTAGAAATACTCCTCCTCCTCACATAGACAGGCCGGACAGCAATGTAGGATC AGTTAGGACACGAAGAACAGTGAGCGGTCAAGCCAGAGGAAGGTTTTCCAGCCAAGGAAATGCTAATCCTGTGGCACCCAGTGAGACTCTTTCAGTTATT CCTCCTTTGTCACGTTCCAGTGATCTTAATGCTCCTGGTGTATCATATCATTCTTCTGTGGAGGCCGCTTTAAGTCAACCAAGCTCTTATATTATGCCAG GTACTAGCAATGAGGAGTTATATGGTGTTATGCCCGTGCCTTCTTCAGAATTTGGCATAACCCGTTCTCTAATAAATCGGGAGGGATTTCGACGACGCTA CAATATGGATGGTATTGCAGAGGTGTTGTTGGCACTTGAGAGAATTGAGCAAGATGTTGAGCTAAGACATGAGCAAATTCTTATGCTGGAGTCCAACTTG TTCCTCAATGGACTGAACTTCTATGATCAGCATAGAGACATGCGGCTCGACATTGATAACATGTCATATGAGGTTTGTTAATGTCTTAAGGTGCTACTAT TCAATTAGTTATATTCGTTTGTTTAATTTCCTCTCCTTTTTCTTATAATATCTATTATGGTTTGAGAGCTTTGCGATTACAACAGATTTGAATGAAAATA TTAACAATATATTATTGAAGCAAATATTGCATGCAGTTATCTTGGGGTTTTGAAACTATTTTTATTTTTAGCTATTCTCACCTCTTGGTTTTACATAATT GAAGGAACTGTTAGCTCTAGAAGAGAGGATGGGTACTGTGAGCACTGCTCTAACAGAGGAAGCACTATCAGAATGTCTAGAGAGAAGTTTCTATCAGCCC TTGCCCAGAGATGATGAAGCTGAGAGTTGTGACGAGCATAAAGATGATACCAAATGCAGCATCTGTCAGGTATTTTTCATATATTCAATAAAACATTTTG CATAACTTTGCTTTTTCATGATCTTTGGAGTGTCATTGATCGAGAACGCAATCATGGATCGAAGCCTTGTTGCCTATGATGATCTAACTGCATCCAGTAG GACTCATTTGACGAAATCGGTATCTGATTCCAACAAAGCTAAATTTAGGATGCGTTTAGAAGAGCTTATCTAGGCTTATCCTATTGTATAAACACTTAAG CAACCGTTTGGAAGAGCTTTAAAAAATGTTTATGACCATCCTATAAGCGTTAATATGATAAATGCTACTCCATTAAGTGTTTGATACACACCCTAGTGTC AGTTGACAAAACGCTCCGGCTGCACTGGTACTATTTTATCGTAGAGCTCATAAGCATTTAACACTACAAGTTTCAATCCATTACACAAACAAAAGGAATC TAGGAATTTTCATTCTGCATGCACTTGAAAGTTATTTCTTTTAACATCTGATATAGATAAATTTGCTTTGGTTGCAGGAGGATTATTTGGTTGCAGATGA AGTAGGGAGTCTGAAATGTGAGCATAAGTATCATGTGGTTTGTATACAGCAATGGCTGAGGCTGAAGAACTGGTGCCCTATTTGCAAAGCACCAATAGGG CCTTCAAATTCATCATCTCCAGCTCATTAGTTTCTTTGCATTGCACTATTAGGCTATAGACAATGGAAACTGGATTCTTTTTACAACCTCATTTTCTTCA TTTCTCTTTTCCCTTTTGTACAAAATACAGTTTCTCCTCACCTTTTCATCTTATTGGTCATTTGTACAGATATTAAGTCCCCATTATATATCAAATAACA CAAGCCAATGGCTTGATAGACTCAAACCATCTTGTTAACCTTTGGGTCCAATAGTCCCTTATAAATAAATTTCCTTCC
• Tissue: pods
• Gene name: LI_gene_185211;
• Additional information: details;

Expression of Ll_transcript_381547

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0
• PS2: 0
• PS3: 0.3
• PW1: 0.1
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_381547

• Blastp: Probable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 41.89% of identity
• Blastx: E3 ubiquitin-protein ligase MBR2 from Arabidopsis with 53.85% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (9272591)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417163.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;