Ll_transcript_380575

• Id Trinity: TRINITY_DN51482_c0_g3_i10
• Name Transcript: Ll_transcript_380575
• Sequence: CGTGTGTATACTACAACAACTTGTACTTCAAGAAATTCAAGTCTAATGGAAGAAGTGGAGCTTGTCTCTGATTTACATTCACATTTAGAACCAAGCCTAA CTTCTAATATGGACCAACCTTCCAACAAACCAAGCAGCAAAACAGAAAGTGTTACATTCTTTGGCTTGTTTTCTGCAGCTGATAGATTTGACTATGTCTT AATGTTCCTTGGAAGTGTTGGGGCATGTGTCCATGGTGCTGCTCTTCCTGTTTTCTTTATTTTGTTTGGTCGAATGATTGATTCTTTAGGACATCTTTCT AAGCAGCCTCACAAATTGTCCTCACACATTTCACAGCATGCTTTGTACTTGGTCTATCTTGGACTCGCGGTTCTGGTATCAGCTTGGATGGGTGTTGCAT TCTGGATGCAAACCGGAGAGAGGCAAACAGCTCGTTTGCGCTTGAAGTATTTGCAGTCAGTACTAAAGAAGGATGTTAATTTCTTTGACAATGAAGCCAG AGATGCTAATATCATTTTCCACATTTCTAGTGATGCAATATTGGTACAAGATGCAATTGGTGATAAGACAGGCCATGCTATGCGATACCTTTCTCAATTC ATTGTTGGATTTGCAGTTGGATTTACATCAGTATGGCAGCTTACACTACTCACCTTGGCTGTTGTTCCATTGATAGCTATAGCAGGAGGAGCGTATACTA TAATTATGTCTACTTTATCAGAAAAGGGTGAAAAAGCTTATGCCGAAGCCGGGAAGGTTGCAGACGAGGTGATTTCTCAAGTGCGTACCGTTTACTCATT CGTAGGAGAAGAGAAAGCAGTTTCTGAATACTCCAAGTCACTTGATAATGCGCTAAAGCTTGGCAAGAGGAGTGGTTTTGCTAAAGGAGTTGGAGTAGGC TTTACATATTGCCTTTTATTTTGTGCTTGGGCATTGCTTCTTTGGTATGCCAGCATACTTGTGAGGCATCATAAGACTAATGGAGGGAAAGCGTTCACAA CAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGTCAGGCTGCTCCAAACATTGGTTCCATCGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAA CATGATTGCATCTGTTTCGAAAACTTCTGAAGGGTTGGATGATGGCACTGTTCTGCCACAAGTAGCAGGGAAAATTGATTTTTTTGAGGTCTGCTTTGCT TACCCTTCAAGATCCAATATGGTCTTCGAAAATTTGAGCTTCTCGGTGAGTGCTGGGAAAACTATAGCAGTTGTTGGTCCTAGTGGTTCTGGAAAGAGCA CAATCATTTCCATGATTCAAAGGTTCTATGGCCCAACTTCAGGTAATTAATATTACTAAGACTAGATTATTCATTTGAATTCTCCATCACAGTTTTTGGA AGTGGATTGAATTAATTAGTACATAGCCAGTTTTGAATGGCAATGTATACTTCAACACTTAGGAGAGGTTAATGCATAAATTTTCACTAGGTAAGATCTT ATTGGATGGACATGACTTAAAGGATCTTCAGTTGAAATGGTTAAGAGAACAGATGGGTTTGGTTAGTCAAGAACCAGCACTATTTGCCACAACAATAGCT GAAAACATTTTATTTGGAAAAGAAGATGCAGACATGAATCAAATCATAAAAGCTGCCAAAGTTGCAAATGCTCATCCCTTCATTGATGGATTACCTGATG GTTATCAGACTCAGGTTGGAGAGGGTGGTACCCAACTTTCAGGAGGGCAAAAGCAAAGAATTGCTATAGCAAGAGCAGTGCTCAGAAACCCAAAATTACT GCTTTTGGATGAAGCAACCAGTGCTCTTGATGCTGAATCAGAACTCATTGTACAGAAGGCATTGGAAAACATAATGTCAAACCGGACAACAATAGTTGTT GCACACCGGTTATCCACCATACGCAATGTAGACAGTATTGTAGTCCTGAAGAATGGACAAGTTGTTGAAAGTGGAACTCATTTAGAATTGATGTCCAAAA GTGGAGAGTATGCAAGTCTGGTGAATCTTCAGACATCAGAAGTTGTAACAAGCTCCAACTCAATATCTCGCTCTGGAAGCTCGAAACATTCTAGTTTTAG AGAACTTTCAGATAATCAGAACTATGAGGAGGAGTTGAAGTCGATTACAATAAGAGAGCTACATCAAAGTGACCAAGGCTTGTCATCAAATACTGCTTCG ATTCCATCAATTTTGGATTTACTAAAATTAAATGCTCCTGAGTGGCCCTATGCGATACTTGGGTCGATAGGTGCAGTTTTGGCTGGCATGGAAGCTCCTC TCTTTGCCTTCGGAATCACAAATATTTTGACTGCATTTTATTCTCCTAATGGTTCTAAAATCAAAGAAGAAGTTGATAGGATGTCTCTTATATTTGTTGG AGTGGCTGCTATTACTATACCCATTTACCTATTGCTACACTACTTTTATACATTGATGGGAGAACGCCTCACTGCCCGTGTGCGTTTATTAATGTTCTCA GCTATTCTAAAAAATGAAGTTGCATGGTTTGATTTGAATGAGAACAGCACTGGCTCACTGACGGCCATGCTAGCTGCAGATGCAACATTAGTAAGAAGTG CTCTAGCGGATAGACTATCTACAATAGTGCAAAATGTAGCTCTTACTGTAACTGCATTTGCTATCGCCTTCACATTGAGTTGGAAGCTAACATCAGTGGT TGCAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACAGAGCAACTATTTCTGAAGGGATTTGGAGGAGATTACAGCCATGCTTACTCTAGAGCAACT TCTTTGGCAGGTGAAGCTATTGCCAACATACGTACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCAGCCCAATTTGCATCCGAGTTGAACAAGCCTA ACAAGCAAGCATTTCTGCGAGGCCACATATCAGGTTTTGGATATGGCATAACACAGCTATTTGCTTTCTGCTCCTATGCACTTGGTCTTTGGTATGCATC CATTTTAATCAAGCAGAAAGAGTCAAATTTTGGAGACATCATGAAATCCTTCATGATCTTGATCATTACTGCTCTCGCGATAGCAGAAACACTAGCTCTT ACCCCAGAGATCGTAAAAGGGTCACAGGCACTGGGATCAATTTTCAGTATTCTCCGACGGAAAACAGCCATTAACCCCAATGACCCTAACTCTAAGATGG TTTCTGATGTCAAAGGAGATATAGAGTTCAAAAATGTATCCTTCAAGTATCCAATGAGACCTGATATCACCATATTCCATAACTTAAACCTCAAAGTCTC GGCAGGCAAGAGTCTCGCGGTAGTAGGACAAAGTGGTTCCGGGAAGAGTACTGTGATTTCTCTTGTAATGAGGTTCTATGAGCCTACTTCTGGATCAGTT ATGATTGATGAATGCGATATCAAAAACGTAAACTTAAGATCCTTAAGGATGAGAATAGGATTGGTTCAGCAAGAACCTGCATTATTCTCTACCACAGTTT ATGAAAACATTAAGTATGGAAAAGATGAGGCATCAGAAATAGAGGTAATGAAAGCAGCAAAAGCAGCAAATGCTCATGAGTTCATTAGCAGAATGCCTGA AGGTTACAGAACTGAGGTTGGTGAGAGAGGAGTGCAACTATCTGGTGGACAAAAACAAAGGGTGGCAATAGCTAGAGCTATTCTGAAAGATCCATCAATT CTTCTATTGGATGAAGCAACAAGTGCACTTGACACTGTATCAGAGAGGCTGGTGCAGGAGGCTCTTGATAAGCTTATGGAAGGAAGAACTACAATCTTGG TTGCTCACAGGCTCTCAACTGTCCGCAATGCTGACAGCATCGCGGTGCTGCAACAAGGGAAGGTGGCCGAATTTGGCAGCCATGAGAGGCTGATTGCTAA ACCAGGAAGCATTTATAAGCAGTTGGTTAGTCTGCAGCAAGAAAATGGTGGTGATTGTTGAAATTACAGGGTTTAGATATAGAACCACGAAAAATAATGC TCAAAATAGTAAATTGTTTTGATTGAATGATCATTTGTTATAAAAAGGTAATAAGAATGTCTTTTAACTCCTTTAATACTTACACCTCATCTTATGCCTA AAATGACCTAAACTACCTTAGAAACCCAT
• Tissue: pods
• Gene name: LI_gene_185233;
• Additional information: details;

Expression of Ll_transcript_380575

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.6
• PS3: 0.9
• PW1: 0.6
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380575

• Blastp: ABC transporter B family member 13 from Arabidopsis with 69.03% of identity
• Blastx: ABC transporter B family member 13 from Arabidopsis with 68.67% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT1G27940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433881.1)
• Pfam: ABC transporter (PF00005.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;