Ll_transcript_380564

• Id Trinity: TRINITY_DN51482_c0_g3_i7
• Name Transcript: Ll_transcript_380564
• Sequence: CGTGTGTATACTACAACAACTTGTACTTCAAGAAATTCAAGTCTAATGGAAGAAGTGGAGCTTGTCTCTGATTTACATTCACATTTAGAACCAAGCCTAA CTTCTAATATGGACCAACCTTCCAACAAACCAAGCAGCAAAACAGAAAGTGTTACATTCTTTGGCTTGTTTTCTGCAGCTGATAGATTTGACTATGTCTT AATGTTCCTTGGAAGTGTTGGGGCATGTGTCCATGGTGCTGCTCTTCCTGTTTTCTTTATTTTGTTTGGTCGAATGATTGATTCTTTAGGACATCTTTCT AAGCAGCCTCACAAATTGTCCTCACACATTTCACAGCATGCTTTGTACTTGGTCTATCTTGGACTCGCGGTTCTGGTATCAGCTTGGATGGGTGTTGCAT TCTGGATGCAAACCGGAGAGAGGCAAACAGCTCGTTTGCGCTTGAAGTATTTGCAGTCAGTACTAAAGAAGGATGTTAATTTCTTTGACAATGAAGCCAG AGATGCTAATATCATTTTCCACATTTCTAGTGATGCAATATTGGTACAAGATGCAATTGGTGATAAGACAGGCCATGCTATGCGATACCTTTCTCAATTC ATTGTTGGATTTGCAGTTGGATTTACATCAGTATGGCAGCTTACACTACTCACCTTGGCTGTTGTTCCATTGATAGCTATAGCAGGAGGAGCGTATACTA TAATTATGTCTACTTTATCAGAAAAGGGTGAAAAAGCTTATGCCGAAGCCGGGAAGGTTGCAGACGAGGAGAAGAGAAAGCAGTTTCTGAATACTCCAAG TCACTTGATAATGCGCTAAAGCTTGGCAAGAGGAGTGGTTTTGCTAAAGGAGTTGGAGTAGGCTTTACATATTGCCTTTTATTTTGTGCTTGGGCATTGC TTCTTTGGTATGCCAGCATACTTGTGAGGCATCATAAGACTAATGGAGGGAAAGCGTTCACAACAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGG TCAGGCTGCTCCAAACATTGGTTCCATCGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAACATGATTGCATCTGTTTCGAAAACTTCTGAAGGGTTG GATGATGGCACTGTTCTGCCACAAGTAGCAGGGAAAATTGATTTTTTTGAGGTCTGCTTTGCTTACCCTTCAAGATCCAATATGGTCTTCGAAAATTTGA GCTTCTCGGTGAGTGCTGGGAAAACTATAGCAGTTGTTGGTCCTAGTGGTTCTGGAAAGAGCACAATCATTTCCATGATTCAAAGGTTCTATGGCCCAAC TTCAGGTAAGATCTTATTGGATGGACATGACTTAAAGGATCTTCAGTTGAAATGGTTAAGAGAACAGATGGGTTTGGTTAGTCAAGAACCAGCACTATTT GCCACAACAATAGCTGAAAACATTTTATTTGGAAAAGAAGATGCAGACATGAATCAAATCATAAAAGCTGCCAAAGTTGCAAATGCTCATCCCTTCATTG ATGGATTACCTGATGGTTATCAGACTCAGGTTGGAGAGGGTGGTACCCAACTTTCAGGAGGGCAAAAGCAAAGAATTGCTATAGCAAGAGCAGTGCTCAG AAACCCAAAATTACTGCTTTTGGATGAAGCAACCAGTGCTCTTGATGCTGAATCAGAACTCATTGTACAGAAGGCATTGGAAAACATAATGTCAAACCGG ACAACAATAGTTGTTGCACACCGGTTATCCACCATACGCAATGTAGACAGTATTGTAGTCCTGAAGAATGGACAAGTTGTTGAAAGTGGAACTCATTTAG AATTGATGTCCAAAAGTGGAGAGTATGCAAGTCTGGTGAATCTTCAGACATCAGAAGTTGTAACAAGCTCCAACTCAATATCTCGCTCTGGAAGCTCGAA ACATTCTAGTTTTAGAGAACTTTCAGATAATCAGAACTATGAGGAGGAGTTGAAGTCGATTACAATAAGAGAGCTACATCAAAGTGACCAAGGCTTGTCA TCAAATACTGCTTCGATTCCATCAATTTTGGATTTACTAAAATTAAATGCTCCTGAGTGGCCCTATGCGATACTTGGGTCGATAGGTGCAGTTTTGGCTG GCATGGAAGCTCCTCTCTTTGCCTTCGGAATCACAAATATTTTGACTGCATTTTATTCTCCTAATGGTTCTAAAATCAAAGAAGAAGTTGATAGGATGTC TCTTATATTTGTTGGAGTGGCTGCTATTACTATACCCATTTACCTATTGCTACACTACTTTTATACATTGATGGGAGAACGCCTCACTGCCCGTGTGCGT TTATTAATGTTCTCAGCTATTCTAAAAAATGAAGTTGCATGGTTTGATTTGAATGAGAACAGCACTGGCTCACTGACGGCCATGCTAGCTGCAGATGCAA CATTAGTAAGAAGTGCTCTAGCGGATAGACTATCTACAATAGTGCAAAATGTAGCTCTTACTGTAACTGCATTTGCTATCGCCTTCACATTGAGTTGGAA GCTAACATCAGTGGTTGCAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACAGAGCAACTATTTCTGAAGGGATTTGGAGGAGATTACAGCCATGCT TACTCTAGAGCAACTTCTTTGGCAGGTGAAGCTATTGCCAACATACGTACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCAGCCCAATTTGCATCCG AGTTGAACAAGCCTAACAAGCAAGCATTTCTGCGAGGCCACATATCAGGTTTTGGATATGGCATAACACAGCTATTTGCTTTCTGCTCCTATGCACTTGG TCTTTGGTATGCATCCATTTTAATCAAGCAGAAAGAGTCAAATTTTGGAGACATCATGAAATCCTTCATGATCTTGATCATTACTGCTCTCGCGATAGCA GAAACACTAGCTCTTACCCCAGAGATCGTAAAAGGGTCACAGGCACTGGGATCAATTTTCAGTATTCTCCGACGGAAAACAGCCATTAACCCCAATGACC CTAACTCTAAGATGGTTTCTGATGTCAAAGGAGATATAGAGTTCAAAAATGTATCCTTCAAGTATCCAATGAGACCTGATATCACCATATTCCATAACTT AAACCTCAAAGTCTCGGCAGGCAAGAGTCTCGCGGTAGTAGGACAAAGTGGTTCCGGGAAGAGTACTGTGATTTCTCTTGTAATGAGGTTCTATGAGCCT ACTTCTGGATCAGTTATGATTGATGAATGCGATATCAAAAACGTAAACTTAAGATCCTTAAGGATGAGAATAGGATTGGTTCAGCAAGAACCTGCATTAT TCTCTACCACAGTTTATGAAAACATTAAGTATGGAAAAGATGAGGCATCAGAAATAGAGGTAATGAAAGCAGCAAAAGCAGCAAATGCTCATGAGTTCAT TAGCAGAATGCCTGAAGGTTACAGAACTGAGGTTGGTGAGAGAGGAGTGCAACTATCTGGTGGACAAAAACAAAGGGTGGCAATAGCTAGAGCTATTCTG AAAGATCCATCAATTCTTCTATTGGATGAAGCAACAAGTGCACTTGACACTGTATCAGAGAGGCTGGTGCAGGAGGCTCTTGATAAGCTTATGGAAGGAA GAACTACAATCTTGGTTGCTCACAGGCTCTCAACTGTCCGCAATGCTGACAGCATCGCGGTGCTGCAACAAGGGAAGGTGGCCGAATTTGGCAGCCATGA GAGGCTGATTGCTAAACCAGGAAGCATTTATAAGCAGTTGGTTAGTCTGCAGCAAGAAAATGGTGGTGATTGTTGAAATTACAGGGTTTAGATATAGAAC CACGAAAAATAATGCTCAAAATAGTAAATTGTTTTGATTGAATGATCATTTGTTATAAAAAGGTAATAAGAATGTCTTTTAACTCCTTTAATACTTACAC CTCATCTTATGCCTAAAATGACCTAAACTACCTTAGAAACCCAT
• Tissue: pods
• Gene name: LI_gene_185233;
• Additional information: details;

Expression of Ll_transcript_380564

FPKM

• PAB: 0
• PNAB: 1
• PS1: 2.9
• PS2: 1.2
• PS3: 5.3
• PW1: 1.1
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380564

• Blastp: ABC transporter B family member 13 from Arabidopsis with 69.06% of identity
• Blastx: ABC transporter B family member 13 from Arabidopsis with 69.52% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT1G27940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433881.1)
• Pfam: ABC transporter (PF00005.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;