Ll_transcript_380567

• Id Trinity: TRINITY_DN51482_c0_g3_i8
• Name Transcript: Ll_transcript_380567
• Sequence: CGTGTGTATACTACAACAACTTGTACTTCAAGAAATTCAAGTCTAATGGAAGAAGTGGAGCTTGTCTCTGATTTACATTCACATTTAGAACCAAGCCTAA CTTCTAATATGGACCAACCTTCCAACAAACCAAGCAGCAAAACAGAAAGTGTTACATTCTTTGGCTTGTTTTCTGCAGCTGATAGATTTGACTATGTCTT AATGTTCCTTGGAAGTGTTGGGGCATGTGTCCATGGTGCTGCTCTTCCTGTTTTCTTTATTTTGTTTGGTCGAATGATTGATTCTTTAGGACATCTTTCT AAGCAGCCTCACAAATTGTCCTCACACATTTCACAGCATGCTTTGTACTTGGTCTATCTTGGACTCGCGGTTCTGGTATCAGCTTGGATGGGTGTTGCAT TCTGGATGCAAACCGGAGAGAGGCAAACAGCTCGTTTGCGCTTGAAGTATTTGCAGTCAGTACTAAAGAAGGATGTTAATTTCTTTGACAATGAAGCCAG AGATGCTAATATCATTTTCCACATTTCTAGTGATGCAATATTGGTACAAGATGCAATTGGTGATAAGACAGGCCATGCTATGCGATACCTTTCTCAATTC ATTGTTGGATTTGCAGTTGGATTTACATCAGTATGGCAGCTTACACTACTCACCTTGGCTGTTGTTCCATTGATAGCTATAGCAGGAGGAGCGTATACTA TAATTATGTCTACTTTATCAGAAAAGGGTGAAAAAGCTTATGCCGAAGCCGGGAAGGTTGCAGACGAGGTGATTTCTCAAGTGCGTACCGTTTACTCATT CGTAGGAGAAGAGAAAGCAGTTTCTGAATACTCCAAGTCACTTGATAATGCGCTAAAGCTTGGCAAGAGGAGTGGTTTTGCTAAAGGAGTTGGAGTAGGC TTTACATATTGCCTTTTATTTTGTGCTTGGGCATTGCTTCTTTGGTATGCCAGCATACTTGTGAGGCATCATAAGACTAATGGAGGGAAAGCGTTCACAA CAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGTCAGGCTGCTCCAAACATTGGTTCCATCGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAA CATGATTGCATCTGTTTCGAAAACTTCTGAAGGGTTGGATGATGGCACTGTTCTGCCACAAGTAGCAGGGAAAATTGATTTTTTTGAGGTCTGCTTTGCT TACCCTTCAAGATCCAATATGGTCTTCGAAAATTTGAGCTTCTCGGTGAGTGCTGGGAAAACTATAGCAGTTGTTGGTCCTAGTGGTTCTGGAAAGAGCA CAATCATTTCCATGATTCAAAGGTTCTATGGCCCAACTTCAGGTAAGATCTTATTGGATGGACATGACTTAAAGGATCTTCAGTTGAAATGGTTAAGAGA ACAGATGGGTTTGGTTAGTCAAGAACCAGCACTATTTGCCACAACAATAGCTGAAAACATTTTATTTGGAAAAGAAGATGCAGACATGAATCAAATCATA AAAGCTGCCAAAGTTGCAAATGCTCATCCCTTCATTGATGGATTACCTGATGGTTATCAGACTCAGGTTGGAGAGGGTGGTACCCAACTTTCAGGAGGGC AAAAGCAAAGAATTGCTATAGCAAGAGCAGTGCTCAGAAACCCAAAATTACTGCTTTTGGATGAAGCAACCAGTGCTCTTGATGCTGAATCAGAACTCAT TGTACAGAAGGCATTGGAAAACATAATGTCAAACCGGACAACAATAGTTGTTGCACACCGGTTATCCACCATACGCAATGTAGACAGTATTGTAGTCCTG AAGAATGGACAAGTTGTTGAAAGTGGAACTCATTTAGAATTGATGTCCAAAAGTGGAGAGTATGCAAGTCTGGTGAATCTTCAGACATCAGAAGTTGTAA CAAGCTCCAACTCAATATCTCGCTCTGGAAGCTCGAAACATTCTAGTTTTAGAGAACTTTCAGATAATCAGAACTATGAGGAGGAGTTGAAGTCGATTAC AATAAGAGAGCTACATCAAAGTGACCAAGGCTTGTCATCAAATACTGCTTCGATTCCATCAATTTTGGATTTACTAAAATTAAATGCTCCTGAGTGGCCC TATGCGATACTTGGGTCGATAGGTGCAGTTTTGGCTGGCATGGAAGCTCCTCTCTTTGCCTTCGGAATCACAAATATTTTGACTGCATTTTATTCTCCTA ATGGTTCTAAAATCAAAGAAGAAGTTGATAGGATGTCTCTTATATTTGTTGGAGTGGCTGCTATTACTATACCCATTTACCTATTGCTACACTACTTTTA TACATTGATGGGAGAACGCCTCACTGCCCGTGTGCGTTTATTAATGTTCTCAGCTATTCTAAAAAATGAAGTTGCATGGTTTGATTTGAATGAGAACAGC ACTGGCTCACTGACGGCCATGCTAGCTGCAGATGCAACATTAGTAAGAAGTGCTCTAGCGGATAGACTATCTACAATAGTGCAAAATGTAGCTCTTACTG TAACTGCATTTGCTATCGCCTTCACATTGAGTTGGAAGCTAACATCAGTGGTTGCAGCCTGCCTTCCCCTTCTCATAGGAGCTTCTATCACAGAGCAACT ATTTCTGAAGGGATTTGGAGGAGATTACAGCCATGCTTACTCTAGAGCAACTTCTTTGGCAGGTGAAGCTATTGCCAACATACGTACTGTTGCTGCTTTT GGTGCAGAAGATCGAATCTCAGCCCAATTTGCATCCGAGTTGAACAAGCCTAACAAGCAAGCATTTCTGCGAGGCCACATATCAGGTTTTGGATATGGCA TAACACAGCTATTTGCTTTCTGCTCCTATGCACTTGGTCTTTGGTATGCATCCATTTTAATCAAGCAGAAAGAGTCAAATTTTGGAGACATCATGAAATC CTTCATGATCTTGATCATTACTGCTCTCGCGATAGCAGAAACACTAGCTCTTACCCCAGAGATCGTAAAAGGGTCACAGGCACTGGGATCAATTTTCAGT ATTCTCCGACGGAAAACAGCCATTAACCCCAATGACCCTAACTCTAAGATGGTTTCTGATGTCAAAGGAGATATAGAGTTCAAAAATGTATCCTTCAAGT ATCCAATGAGACCTGATATCACCATATTCCATAACTTAAACCTCAAAGTCTCGGCAGGCAAGAGTCTCGCGGTAGTAGGACAAAGTGGTTCCGGGAAGAG TACTGTGATTTCTCTTGTAATGAGGTTCTATGAGCCTACTTCTGGATCAGTTATGATTGATGAATGCGATATCAAAAACGTAAACTTAAGATCCTTAAGG ATGAGAATAGGATTGGTTCAGCAAGAACCTGCATTATTCTCTACCACAGTTTATGAAAACATTAAGTATGGAAAAGATGAGGCATCAGAAATAGAGGTAA TGAAAGCAGCAAAAGCAGCAAATGCTCATGAGTTCATTAGCAGAATGCCTGAAGGTTACAGAACTGAGGTTGGTGAGAGAGGAGTGCAACTATCTGGTGG ACAAAAACAAAGGGTGGCAATAGCTAGAGCTATTCTGAAAGATCCATCAATTCTTCTATTGGATGAAGCAACAAGTGCACTTGACACTGTATCAGAGAGG CTGGTGCAGGAGGCTCTTGATAAGCTTATGGAAGGAAGAACTACAATCTTGGTTGCTCACAGGCTCTCAACTGTCCGCAATGCTGACAGCATCGCGGTGC TGCAACAAGGGAAGGTGGCCGAATTTGGCAGCCATGAGAGGCTGATTGCTAAACCAGGAAGCATTTATAAGCAGTTGGTTAGTCTGCAGCAAGAAAATGG TGGTGATTGTTGAAATTACAGGGTTTAGATATAGAACCACGAAAAATAATGCTCAAAATAGTAAATTGTTTTGATTGAATGATCATTTGTTATAAAAAGG TAATAAGAATGTCTTTTAACTCCTTTAATACTTACACCTCATCTTATGCCTAAAATGACCTAAACTACCTTAGAAACCCAT
• Tissue: pods
• Gene name: LI_gene_185233;
• Additional information: details;

Expression of Ll_transcript_380567

FPKM

• PAB: 0
• PNAB: 4.9
• PS1: 2.3
• PS2: 2.3
• PS3: 3.7
• PW1: 5.3
• PW2: 5.6
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380567

• Blastp: ABC transporter B family member 13 from Arabidopsis with 70.53% of identity
• Blastx: ABC transporter B family member 13 from Arabidopsis with 70.23% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT1G27940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433881.1)
• Pfam: ABC transporter transmembrane region (PF00664.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;