Id Trinity | TRINITY_DN51483_c2_g4_i1 |
---|---|
Name Transcript | Ll_transcript_381155 |
Sequence | GAGTGGGTGTGAGATGAATAGAGACGAAAATTGAAACTCAACTCCGAATTTTGGTGCAGATTCTTCGCTTAATTTCGTTTTCGATTTTCTCATATGGACG ATTCAACCGTTGATGATTTACAAGGTTTTCGGAATTCTCTTCATCATGTTCTTTCCACCGTTGATAAGCTTGAGAAGCAAGTGATTGAGGTTGAACAGTT CTACCGATCCACTGGTAATGTTCAAGTTAATAATTCTAAAGGTGGCTCAGCTGTAAAAGAAAAGGGTCGGGAGAAGAATCTTATTGGCACTAAGAAGCCC CTGCAAGATGCATCATGTACAGAACCTGCTGCTGCAAAGAGAATGCAAGAGCTCATACGCCAGTTTTCCACAATATTGCGTCAGATTACTCGGCATAAAT GGGCTTGCCCCTTTATGGACCCCGTAGATGTAAAGGGTCTTGGGCTTCATGACTATTATGAGGTTATTGATAAGCCCATGGATTTCAATACGATAAAAAG TAAAATGGATGCTAAGGATGGCACGGGATATAAGAATGTCCGAGAGATATATGCTGATGTAAGGTTGATATTTAAGAATGCAATGAAATACAATGATGAT GAAAAACATGATGTTCATGTTATGGCAAAGACCTTGCTGGAAAAGTTTGAGGAGAAATGGTTGCAACTTTTACCTAAAGTTGTTGATGAGGAAAAGAGGC AACTAGAGGAAGAGTCACAGGCACAACTAGACACGCTGCTTGCTCAGGCAACCACTTATGAGAATATGGCTAGGGATTTAAGCTCCGAGCTTTCTGAGGT TGACATGCATTTAAAGAGTCTCAAAGAAATGGTCATTCAGAAATTCAGGTTCGTGAAAAAATCATTCATCTCTTGGTCCTTGTCACTGAGGTCAATTTAC AGTGGAAAATTTTCATTATACCTGTTCATGTCTTTCATTTCTTATCCCCATGACTATGAGGTTTAAGTTCATTGTATTCTTGACACTTGTCATGTAATGA TTGAGATTAAATTCTGAAGGTGCTTAATTTATGAAAATTCACTAGCCCCCCATGTAAGATTTGATGAAAAGGTCCCCCTTTCTCAGCATTAACTTACTTT TCCACTATCGCTGTTGGCTGTATTTATTTATGATATATATTTAACATTTGTCGGATGTTGATTCAATTAGAAATATAGGGAATGAAAACATTTGTCATGT GGCACGTTTAGCCTTTTATGGTCTGGCTTCCTGATGGGCTTGGTTTATTAGTAGTAAGACTGAATGTGCCCAAGTTATCACTGGGAAAATTGAATGGTTT ATATTTATATGAAAGAAGAGAAACCAATGTTTTGATAAAGAATCCATTGCTGAATTGGAAGTTCAAATTTTACTAGATGAGAATCAAGGTGAGAGCTAGA GCATTTGACAATTTTTACCAATGCCAACCCTTAGGCTTCAAAATGGAGAAATAAGTATTTACAGCCTTGCTATAAGTAGCGAGGGAAAAAACTCGAAAGA CTAGGGAGATTTGGGCAAAGTTTTATTTGAATATAAACTTCAGAGTTATCAAGAAAAGTTTTCTTCCTTCCTGGTTTGGTAAATCTGAAGAATAGTCATT GGCTTTGGTTACCTCTTTATTCTCTCAAACCTCTATTTCTGGGTAGAAACCCATCTAGACTCCTTCCCCTCATCAATGGTTCTCTTTTTTTTGTTGCTTC CTGTTTTGCCCCCTTCAATCTGACTACTGGTTTCTTTTTGTAGTTGCAGCCAAACTGCTTCAATAAAGAAGAAAACAGTATTTTCCGCTGTTTAAGGATT TCATCCACACTAAATATTGGCCATCAAGTACTTTTTTTAATAAAAAATTCAAACTAGAATCAATAACTAAGAAAAATACAAAAAACAATCTAGAAACTGA CAAACAGAACAAAGAAAGAAACTTAATAGAAAGATGCATATTGAAACACATGCAGAATTGAACCTAGAAGCACAAGGAAATATACAGATTGCATTATTTG GTCTTAAAATTATCTGTTTCGTGCTTCAATAGTTGGGTGCCTCCATATGCATGACTTGTTTTCGACAGATTCTGTTATTTTTGTTCATTATTCATATTTT GCACTGACTAAGCTGACAAGTGTCGATGCCGTAGAAAAATGTCTACTCTAGATAAGAAATTACTTGGGGCAGCTCTCACCAAATTGTCTCCTGAAAACCT CACCAAGGCATTGGAGATAGTAGCTGAAAATAACCCGAGTTTCAAATTTGCTTCGGAAGAAGTGGACCTGGATATTGATGCTCAGAGCGACTATACACTA TGGAAGTTAAGGGTCTTTGTAAAAGATGCTCTCGAAGGTCAAGGAACTAGTACTGGGGACCGTAACGATAATGCCGATGACAAGACAAACAATTCGAAAC GGAGGAGACAAATTTGTGATTCTATTGCCAAGACAAATGCAAAACGGACTCGGAAACTGTCTACTTTGTGAGACAGTAGTACAGCATATAAGGCATTAAT TATAGTCTGAATGAGCCAAAGTTTCTCAAGACATTCAAAGTTGGACAAAGCAGTAGTACTATTCTGCACCTCCGTAAGTTGCTATATATTGTTAATATGA AACCAAACAAGTCCTTAGGGTCCATAAATTAGGCTTTGGTGCCTTAAACTTTCTGTGTAGGAATTCAACTTTTGGAAGCATGAAAAGCAACTTCTGTTAG TTGCTAAGTAATGCTTTTAAACAGCCTCGAGAGTTGGAAGAGGTCGACCATTTCGGTCTAGTCTGTTTGTCTTGAAATTCTCAGAAGAATTGAGGCATTT ATAGCTGTAAATAAGAAAATTCTGGTAAAGAAAATGCACATATTGACCAATACATTGGTTAAATGTGCAAAACCATAGGAAAAGAACATATCATACATTA CCAACTGGAGGGTGATTTCTATATTTGTCTCTATGAGAGTTGAAATGGAATATGAACTTATCTTGTATGCTTCACTGTTGATTTGTTTGTGTCTTTTCCA ATTGTCATTTTTTTTCTTTATTTAAAGAACATAAGCTTAAGAAATTGCTATTTTCACTATACTGATGAATATGCATATTCATGATGAGCATATATAATTC ATACAACATTATGATGATAACATTGCC BLAST |
Tissue | pods |
Gene name | LI_gene_185251; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381155
Blastp | Transcription factor GTE1 from Arabidopsis with 48.61% of identity |
---|---|
Blastx | Transcription factor GTE1 from Arabidopsis with 48.61% of identity |
Eggnog | bromodomain(COG5076) |
Kegg | Link to kegg annotations (AT2G34900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446961.1) |
Pfam | Bromodomain (PF00439.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |