| Id Trinity | TRINITY_DN51488_c1_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_381581 |
| Sequence | AAAATAAATTGCTTTCAAAAAATGGAGAAACCATAGCCATTGGAGCTTCCTATATAGCAAGCACACAGTTGTTGGCACAAGGAGAAATGGCTGACCAGCA AAGTGGCCGAATCTCTGTAACTTTCAAAGCCGCAAAGTCACTTCTTCCTCTTAAAAGACCTTCCAATGATTACCAATTCAAGAGTGCATGTGATGTTAAT TCCTCGGTTCGGGGTTTCACTAGACAGAGAGTTCCTCTTTCAGAGGTGCCATTGAACACCCGGGGCAATGCAATAGGGAATGAGTACTACTATGGTCCAT CACCACCTGATCTGATTGAAGGCTGTTTAAGTGAAAGGGATATAACTGCTACTGTAGTTAGTGCTGGGAAGGAGAATGCGTGTCAATCATATTTTGAAAC TCCTAGGAAAGAGCCTGATTGCACAAAAACGTTGGATTATTTCTCTGTTACTAGTCTTCTCGACGATGAGCTCGATGAGTCTGTTTTTGAAGAAATTGAT GTTACTGGTCTTCTCGATGATGAGCTCGATGAGTCTGTTTTTGAAGAAATTGATGTTTTGGTTCAGCAAAAATCTGCGGAAAAAGCAGCTGCGCAAGAGT TAGACACTAGCATTGATGGGAAAATTTTGAGTGAGGTCGATGTTGTTGGTGATGTTACTTTGACTCCAGAAACTACTGATTCTGAGGGTATAAGAATTGG CGACCTATTGAGCATTGGCGTTGATTTAGAACCTAAAGAAGAAGAAACGGATAGTCTGAAATGTTTACAAAGTGGTAATATGCCAGAGGAATATTTGAAA TACTTGAAATCTCTAAATGACAGGCAAAGAGAAGCAGCTTGCACTGATATTTCAACCCCTTTAATGATTGTAGCTGGCCCAGGGAGTGGAAAGACATCCA CAATGGTTGGGCGTGTTTTGATGCTGCTTAATGAGGGTATTAGCGCTTCAAACATTCTTGCTATGACATTTACAACAGCAGCTGCTTCTGAAATGAGAGA ACGTATAGGATCCATAGCTGGGAAGGCAACAGCTAAAGAACTTACGATCAGTACTTTTCATTCATTTTCCTTGCAACTTTGTCGCGCACATGGAGAAAAG TTTAAAGCCATACTACCTAGTACCCGGCCACAATGCACACAAGTATATGACTGGATCCGAGTAAACTATATTTTCTACCCATAAGATTTTAACTCATTTG CTCAAATAATTTCTGAACTTACATTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_185302; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381581
| Blastp | ATP-dependent DNA helicase SRS2-like protein At4g25120 from Arabidopsis with 41.39% of identity |
|---|---|
| Blastx | ATP-dependent DNA helicase SRS2-like protein At4g25120 from Arabidopsis with 41.03% of identity |
| Eggnog | helicase(COG0210) |
| Kegg | Link to kegg annotations (AT4G25120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441073.1) |
| Pfam | UvrD/REP helicase N-terminal domain (PF00580.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |