| Id Trinity | TRINITY_DN51491_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_382530 |
| Sequence | GTCAATTCAAAACAAAAATGGATTAGTTACCAATTTCTATTGTTTTTGAAAGTGCACTCACAATTAAGCTTTTAGATCATAGACTTTGAAATTTTGTGAC CAGAATTGTAATTAAGTCTTGAAGGATTAAACTTAGGTGTAATTTGATATATTTCCCTGGTTGTTAGCCTTAATCTCATTAGGTAGGGTCGGCTAATTGG ATTGAACGATAATTCTGTATCATAGCATAACATGTGTGAATTGTAATAGCTTGTGAATGATAACATTTGTTGTATATGTTATGTTTTTATTGGAAAATAA GAGCACACACGCCTCAAAGAATTTTACTTAGTTGAGTTTTAGAGAGGATGCTTCTCACAAGTGTATTTATGGCTCTTGTCTTCCATTTCCCTCCAAAATT CGGCTCGGAAACAGACCCCAAGGTTTATCATATTTTTTAGTTCTTGTATGTGTGTTACTTTTGGACTTACAGATGAGATAAAAATGCTAGAACTGCCTTT CTTTCAATTTGGTAGAACTGTTTTAGAGGAGAATTTTGATCCAAGGGGGGTGATTGGAATGTGGAATCATCTTTCATACCTTTTCAGAGCTTATACAGTT CATCCCTATTCATAACTTGCAAATTGGAAATATCTGGTCCTGGTTATTGAATTTGTTATGTCGTTTTTTTGACTTGCCATACCTGAATGTAATGATAATT ATGTATGTTCTTACAGTACAAAGACCTGAAGCGATTCTTCTTGTCACCATTCTACCATATCGGAGAGCCTCACCTGGTATACAATATGTTATCCCTTTTG TGGAAGGGGTTTCAGTTGGAAACTGCCATCGGAAGTGTCGAATTCGCTTCTATGGTTGCTTCCTTACTTGCTTTATCCCAGGGTATCACTCTAATGTTAT CCAAATCATTGCTTCTGTTTTTTGACTACGAGAGGGCATACTACAATGAATATGCCGTTGGCTTCTCTGGTGTCCTCTTTGCCATGAAAGTTGTTCTTAA TGCCCGATCCGAAGATTATAGCTATGTACATGGAGTCATAGTTCCATCACGTTATGCTGCTTGGGCTGAATTGGTTCTGATCCAAATGCTTGTTCCTGGT GTCTCATTTCTTGGTCACCTTGGAGGCGTACTTGCTGGGCTTCTTTATCTTCGATTGAAGGGCACCAATTCAGGCTCAAATCCGCTCACTATTCTCATAA GAGGTCTCACTCGTGCAGCGAACTGGCCTCTCAAGTTTTTACGTCACTTATTTCGATTTCAGCGGGGACGAATCTCTGGTAGGGGAACTGTTGGTGGTAA CCGGGCAGGAAATACTGCTCAGTCTGGTGTTTGGAGATGTCAGGCTTGCACATATGACAATCCTGATTTGTTAACTTTATGCGAGATGTGTGGTACTGGT AGGACTGGGAATGGTTTATCTTCTTTACAATGGAACCATGATTCTGATGACATTCCTTTGGACGAATTACGTCGCCGGAGAATTAACAGATTTGGTAGAT GGTGATGGTTTTGAGCTGCAGCCTCCAGTGAATAATACAGTTGAATAGGAAATTTCATTTCATACATATTACATCATTTTGATATAGGAATTAGGACATA AGTTTGTTGTAGAACTATGACAATTCATCCCATCCCTCTTTGTACTATCCCTCTTTGTACCTCAAGGCTCAGCCGCAATTCATCGCAGATACTTTGTCAA GTTACATCAATTTAGTAAGTTGCATGACATCATTTGGCATGGCATGGTTCAAAAGACACACAACGACTGTAATTATAAGTATGAGGTATGGTTTCTTAAA CTCCTGTCCTGTCTGACTGATTTTTTAAATGTTTCCTTTTACTTATCTGTGGACTCCGTGGCTTTGTTATGGTCTCTTGTCGGGGCAGGTTCTTGTAGCT ATATGGCTGTAGTGAAAATTTGGTTTTTGAAGTCTTGTATGTGTATTTTAAAGAGAGGAAAAAGGTTTTATCTACAGAGTGAGAACGCACATATAGAACA TGGGATTCAGACAACATACTATGAAGATTGTGATTTACAACAACTTAGATTTTGATTATCCATGTGGTGAGGAATACTTTTGGTTAACATAAAAAACAAT TTTGCTAATAAATTCAGAATGAATAATCACTTTAGTGATGGTAAATTCAAAATGAATAGAATAGTTAGTTTATAGGTAAGGGTTATTTATTTATCTCATT AAAATATTTTGTAGATGCACATTTTTAAGAGTAACACAATGGTTTGTTGTTTTTACATTATTTAGGATTTTAAGAACATTCTTGTCTTGCACGCCACATA TTCTTAAAGAATAACAAAATGTTACGGTAGTGGCCGCTCATTGTACGGCAGAGCGAAAAAAGGAAGAGATAGAATCACAAATAGATTTCGGTGATGGAAA AGAGAGGGTGTATTAAGGGCTTAAGGGGAAGGGAGAGAGGGAAAAGAATGAGGTAAGGAAGAGAACTAGAGAATTGAGATTAGTGATGAATGTAGGCTAG GAAAACTAACAATGGGAAAAGATGTTTGACTTGTAAAAGTTTTTTTTATAGTTGTTCTTGTATCATTTCCATTCATGGGAGCAGTTTTTTAACTGATCTT TACACTATTTGTACATAGAGATAATATTAAAAAATTAGTAACTATTGTGCATAGATATAATATTAAAAAATTATTAACTCTAAAATTGATATTTTGTTAG TGTAAAGATTTATATACAAATATTATATTATTTACGGAAAAGTGTATAAAATCCCCATAAACTTTATGCCTTTTGCAAGTAGGCACCATGAATTTTTTTG CTTCCTAATTACTCCTTAAACTCCATCATTTAGTGAATTAATCCACATATAAATATATTATTAAATTAATCATGAATTATAAGAAATTTTTTTGCATTAC ATTGGCGGTGGAGATCAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_185322; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_382530
| Blastp | Rhomboid-like protein 14, mitochondrial from Arabidopsis with 63.91% of identity |
|---|---|
| Blastx | Rhomboid-like protein 14, mitochondrial from Arabidopsis with 63.57% of identity |
| Eggnog | Rhomboid domain containing(ENOG41100KJ) |
| Kegg | Link to kegg annotations (AT3G17611) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455576.1) |
| Pfam | Rhomboid family (PF01694.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |