Ll_transcript_382549

• Id Trinity: TRINITY_DN51491_c3_g2_i1
• Name Transcript: Ll_transcript_382549
• Sequence: AAGATTTCCTGCCTAATCAATATGGTTAATACACTTACTATTTAATTTTTAAAATAGTAGTAATATGTTAATAACAAAAGCAAAACCCCTCTGTTCATTG TGCTTTGGGGACTGCAAGTGCAAGCTTGGTTCACAGCTCTCAAAGCTGCAAAAAGATTTTCTATACTTGTGCTTATCACAAAACCACTTCCCTCAAAAAC AAAAACACATGCTCTCTTCTCATTCTTCAATACAACTATATTCCCATCTCTTTTCATTCTTCAACTTCTTTTTGTTTCTAACCACATAGAAACTATTTCT TCATCCAAAAATGATAACTCTAACAGATTTCTACCATGTCATGACAGCAATGGTGCCACTTTATGTAGCCATGATACTAGCATATGGTTCTGTAAAATGG TGGAAAATCTTCTCCCCTACTCAATGCTCTGGCATAAACCGTTTTGTAGCACTCTTTGCAGTTCCACTTCTATCTTTTCACTTCATTGCTTCAAACAACC CTTACAAAATGAACCTTCGTTTCATAGCTGCTGATACCCTTCAAAAAGTTGTAGTTTTACTTGTTCTCTTCATTTGGAGCAATTTCAGCAAAAGGGGTTG TTTGGAATGGACAATCACACTCTTTTCCATTTCAACACTCCCTAACACTTTGGTTATGGGTATCCCTTTACTTAAAGGGATGTATGGTGAGTTCTCTGGG AGCTTGATGGTACAAATTGTTGTCCTTCAATGCATCATTTGGTACACTTTGATGCTGTTCATGTTTGAGTACAGAGGTGCTAGAATGTTAATCTCTGAAC AGTTTCCAGACACTGCTGGCACCATTGTCTCTATCCATGTTGACTCTGATGTTATGTCACTTGATGGAAGACAAGTTCTTGAAACTGAAGCTGAGATCAA ACAAGATGGGAAGCTTCATGTCACTGTTAGAAAATCCAATGCTTCAAGATCAGATATTTTCTCAAGAAGATCTCAGGGTCTTTTATCAACTACACCAAGG CATTCAAATCTTACCAATGCTGAGATATACTCTTTGCAATCTTCTAGAAACCCTACTCCAAGAGGGTCTAGTTTCAACCACACTGATTTCTATTCTATGA TGGCTGGTGGCAGAAACTCTAATTTTGGTCCTAATGATGCTTATGGTTTATCTGCATCAAGGGGACCAACTCCAAGAACTTCTAGTTTTGATGAAGAGGG TGGTGGTGGAAATAATAATAACAAGACTAGGCATCATTACCCTTCTGGAACAGGACACTACCCTACACCAAACCCTGGCATGTTCTCTCCCACCACTGCC TCTAAAAATGTTCCTTCAAATGCAAATGTTAATGCCAAAAGGACTAATAGTCAAGCTCAGCAGAATAAGATAGAAGATGGAAATAAGGATCTTCATATGT TTGTTTGGAGTTCAAGTGCTTCTCCAGTTTCAGATGTGTTTGGTGCACATGAATATAGTAATGTTCATGATCAGAAAGATGTGAAATTGAATGTATCTCC AAGAAAAGTGGAGGATTATAGAGACTCTACCCAAGAGGAGTATCTAGGGAAGGATGATTTGAGCTTTGGAAATAAAGGAATGGAACATGAAGCCACCAAA GTTGGAAATGAAAAGCCAAAAACTATGCCTCCAACAAGTGTGATGACAAGGCTTATATTGATTATGGTGTGGAGAAAACTTATCAGAAACCCCAACACCT ATTCTAGCTTACTAGGTCTAATTTGGTCACTAGTTTCATTCAGGTGGAATGTTGAAATGCCTGCAATTATAGCAAAATCTATTTCCATTCTGTCAGATGC AGGTCTTGGCATGGCTATGTTCAGTCTTGGTCTGTTTATGGCTTTGCAACCAAAGATCATAGCATGTGGAAATTCCAAAGCAGCTTTTTCTATGGCCGTG AGATTCCTTACAGGTCCAGCTGTAATGGCAGCTGCTTCCATTACTGTTGGCCTTAGAGGCACTCTCTTACACGTTGCCATTGTTCAGGCAGCTCTACCAC AAGGAATAGTCCCATTTGTCTTTGCAAAGGAATACAATGTCCATCCTGATATTCTCAGCACTGGAGTTATTTTTGGAATGTTGATTGCGTTGCCCATAAC GCTCGTGTACTACATATTATTGGGGCTATGAGTTGATGAAAAGATCGATCATATTTGAAGATTACATGTGGCATCCATGCAGGCTATTTTGACTCTTCTA GAGCAAAAGAAGAAAAATTCAATGAAATAGAAAAGCATCATCATCAGAATTTAATAGGAGGAATCAACGGATGAAATTTGTTTTGAGTTGTCCTTGCTTA GCAAAA
• Tissue: pods
• Gene name: LI_gene_185325;
• Additional information: details;

Expression of Ll_transcript_382549

FPKM

• PAB: 0.1
• PNAB: 7.2
• PS1: 8
• PS2: 3.5
• PS3: 5.3
• PW1: 3.1
• PW2: 1.7
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_382549

• Blastp: Probable auxin efflux carrier component 1c from Oryza sativa with 70.49% of identity
• Blastx: Auxin efflux carrier component 1a from Oryza sativa with 70.74% of identity
• Eggnog: auxin efflux carrier(ENOG410Y9XE)
• Kegg: Link to kegg annotations (4340580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446127.1)
• Pfam: Membrane transport protein (PF03547.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;