| Id Trinity | TRINITY_DN51491_c3_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_382552 |
| Sequence | AAGATTTCCTGCCTAATCAATATGGTTAATACACTTACTATTTAATTTTTAAAATAGTAGTAATATGTTAATAACAAAAGCAAAACCCCTCTGTTCATTG TGCTTTGGGGACTGCAAGTGCAAGCTTGGTTCACAGCTCTCAAAGCTGCAAAAAGATTTTCTATACTTGTGCTTATCACAAAACCACTTCCCTCAAAAAC AAAAACACATGCTCTCTTCTCATTCTTCAATACAACTATATTCCCATCTCTTTTCATTCTTCAACTTCTTTTTGTTTCTAACCACATAGAAACTATTTCT TCATCCAAAAATGATAACTCTAACAGATTTCTACCATGTCATGACAGCAATGGTGCCACTTTATGTAGCCATGATACTAGCATATGGTTCTGTAAAATGG TGGAAAATCTTCTCCCCTACTCAATGCTCTGGCATAAACCGTTTTGTAGCACTCTTTGCAGTTCCACTTCTATCTTTTCACTTCATTGCTTCAAACAACC CTTACAAAATGAACCTTCGTTTCATAGCTGCTGATACCCTTCAAAAAGTTGTAGTTTTACTTGTTCTCTTCATTTGGAGCAATTTCAGCAAAAGGGGTTG TTTGGAATGGACAATCACACTCTTTTCCATTTCAACACTCCCTAACACTTTGGTTATGGGTATCCCTTTACTTAAAGGGATGTATGGTGAGTTCTCTGGG AGCTTGATGGTACAAATTGTTGTCCTTCAATGCATCATTTGGTACACTTTGATGCTGTTCATGTTTGAGTACAGAGGTGCTAGAATGTTAATCTCTGAAC AGTTTCCAGACACTGCTGGCACCATTGTCTCTATCCATGTTGACTCTGATGTTATGTCACTTGATGGAAGACAAGTTCTTGAAACTGAAGCTGAGATCAA ACAAGATGGGAAGCTTCATGTCACTGTTAGAAAATCCAATGCTTCAAGATCAGATATTTTCTCAAGAAGATCTCAGGGTCTTTTATCAACTACACCAAGG CATTCAAATCTTACCAATGCTGAGATATACTCTTTGCAATCTTCTAGAAACCCTACTCCAAGAGGGTCTAGTTTCAACCACACTGATTTCTATTCTATGA TGGCTGGTGGCAGAAACTCTAATTTTGGTCCTAATGATGCTTATGGTTTATCTGCATCAAGGGGACCAACTCCAAGAACTTCTAGTTTTGATGAAGAGGG TGGTGGTGGAAATAATAATAACAAGACTAGGCATCATTACCCTTCTGGAACAGGACACTACCCTACACCAAACCCTGGCATGTTCTCTCCCACCACTGCC TCTAAAAATGTTCCTTCAAATGCAAATGTTAATGCCAAAAGGACTAATAGTCAAGCTCAGCAGAATAAGATAGAAGATGGAAATAAGGATCTTCATATGT TTGTTTGGAGTTCAAGTGCTTCTCCAGTTTCAGATGTGTTTGGTGCACATGAATATAGTAATGTTCATGATCAGAAAGATGTGAAATTGAATGTATCTCC AAGAAAAGTGGAGGATTATAGAGACTCTACCCAAGAGGAGTATCTAGGGAAGGATGATTTGAGCTTTGGAAATAAAGGAATGGAACATGAAGCCACCAAA GTTGGAAATGAAAAGCCAAAAACTATGCCTCCAACAAGTGTGATGACAAGGCTTATATTGATTATGGTGTGGAGAAAACTTATCAGAAACCCCAACACCT ATTCTAGCTTACTAGGTCTAATTTGGTCACTAGTTTCATTCAGGTGGAATGTTGAAATGCCTGCTATTATAGCAAAATCTATTTCCATTCTGTCAGATGC AGGTCTTGGCATGGCTATGTTCAGTCTTGGTCAGTATAAACATAGATTCTCTATTTGATTCATGATATATTAGAAAATACTTTAACATAATAATAATAAT AGTACCAAATTTATAAAGTAGAGATTAACTTGTTCTGAGCCTGAAAAAGAAAAAGAGGGAGCAGGAAATCTTTTCATGATTCCATGTTTACTTTGATTAT TATCATTATTAAATGCTTTGTTTCTTTGTTAAAGAAAGGAAACAGGCAAGTGTGTTTCAAAAACAAGCAAAGTAAGGAAACAGTGCAGTGTTATGATAAT ATGTTGCTTCCTTTATTATTATTTTCTATCTGTTATGATTACTAACAAGCGTGCGTTTGTTTGGCACTTCCAAGATATGGACGTTTGAGTAAGATTTTCT AAGTAGTCAAAACTCAGAATCTCAAATTATACATAATAATCAGATGCTGTTTTTGAATGGCTTTTGATTAACATGAATAATTTCTTTTTGATTTTGATTA TCCATAATACAAATAGCTTATACTTTATATTATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_185325; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_382552
| Blastp | Auxin efflux carrier component 1 from Arabidopsis with 69.26% of identity |
|---|---|
| Blastx | Auxin efflux carrier component 1 from Arabidopsis with 69.07% of identity |
| Eggnog | auxin efflux carrier(ENOG410Y9XE) |
| Kegg | Link to kegg annotations (AT1G73590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446127.1) |
| Pfam | Membrane transport protein (PF03547.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |