Ll_transcript_380472

• Id Trinity: TRINITY_DN51494_c2_g1_i22
• Name Transcript: Ll_transcript_380472
• Sequence: GGGTGGTTCATCTTCTTCTTCTTCAAGGTCTCAGATGAAGCTGTGGATGATACGCGCCACCACATCGATAATGCTATGGACTTGTATTGTTCAATTAACG GCATTGGGAGACATGTGGGGTCCTAGAGTTTTGAAAGGATGGCCTTCTTGTTTTACTCATGATTCTGCAATTGTTGCTCTTGATTCTCACTTTCCAACTC CACCTCATGTTTTTCTTCCCCCCAAGAGAGTTTATAAAAACAATGGATATTTAATGGTGTCTTGCAATGGAGGACTAAATCAAATGCGGGCCGCGATATG TGACATGGTAGCCATTGCAAGATATTTAAATGTCACACTTATAGTCCCTGAATTGGATAAAGCATCCTTTTGGGCTGATCCCAGTGAGTTCCAAGACATA TTTGATGTGGATCATTTTATTGCGTCCTTGAGAGATGAGGTGCGCATATTGAAAGAGTTGCCTCCTAGGCTCAAGCTCAGAGTGGAGAATGAGCCACTTT ACACTATGCCACCTATTAGTTGGTCTGACATATCTTATTATCAGAACCAGATTCTGCCCTTGATGCAAAAGTACAAAGTTGTCCATTTAAATCGAACTGA TGCCCGGCTGTCCAATAATAATCTACCCCTGGAGATTCAGAAGTTACGCTGCCGAGTTAATTTTAGTGCTCTGAGATTTACTCCTGAGATAGAGGAGTTG GGCAGAAAGGTGATCAACCTTCTACGGCAAAATGGTCCATTTCTGGTACTTCATCTGAGGTATGAGATGGACATGTTGGCATTTTCTGGATGTACTCAAG GCTGCAACAGCGAAGAGGTAGAAGAGTTGACAAGGATGAGGTGAGTAGTAACTTGCATAGTTCAGCTCTTCCATAATTTTCAATGTTTTGAAACGCTGTG GAGGCTGAAAAGATATTTGATTTAAACCTCTCTCAAATTTTGATTTCATGTGCATCGGCAGATATGCTTATCCTTGGTGGAAGGAAAAAATAATTAACTC TGATATGAAAAGAAAAGATGGCTTATGTCCTTTAACACCCGAGGAGACTGCCCTTACTCTTAAGGCTCTAGACATTGATCAGAACATTCAAATTTACATT GCAGCTGGGGAAATATATGGAGGGCATAGGAGGATGGCAAGTCTTGCTAAGGATTACCCGAAATTGGTAAAGTTTAAAGCTGAAGGAGTATGGTAATTGT GATGCTTGTTATTGTTTGTTTTTTTTCTTACGGTTTACCTTTGTGCGCTTCGTTGAAACAGGTCAGGAAGGAAACACTGTTGGAACCATCAGATCTTCAG TTCTTCCAAAATCACTCATCTCAGATGGCAGCATTGGACTATCTTGTCTCATTAGAGAGTGATATCTTTGTCCCCACGTATGACGGAAATATGGCCAAAG TCGTTGAGGGCCATCGCAGACATCTTGGGTACAAGAAGACGATTTTATTGGACAGAAAGCAACTAGTGGATTTGATTGATCAGTACAACAACGGAGTACT GAACTGGGATCAATTCTCTTCGGCAGTGAAGGAAGCTCATGCTGATCGCATGGGTAACCCAACGAAAAGAATGGTAATCCCTGATCGGCCCAAAGAAGAG GACTATTTCTACGCCAACCCAGAGGAGTGTTTAGAACCATCATCATATCTTCCGTTGAGTAGCACGTGAGTAACACGTTAGGAAAAAGTGGAATTTACTC GCGCCACCATCTCCGGGTGCACATGATTTGGTTTTCTACCACAGATACTGAGGTATTTCCACTCAGTTATAGCGAAAGATCACATTTTTAACAAAGTACC AGTCATGGTGATCCATAAAGAAATAGAGGGTGTGGTGGAATGGATAATCAAACAAAGCAACAAAGGTGGAATACTTTATATTATATATATGCAAATAATC CATTCCATTCATGTATAGAAGGTACCCTCTGATTATAGGGTGAAAGTAGTTCATAGCTGCATTGTACACAAGAGGGATTCATATACAAATTTGGATTACT GCAACTTCAGTCCTTGGAAGCTTAAATTATTGGTACTTTCCTCTTTGATATAAGTATATATTTTTTATTTTTTGTCTGCTTTCTTTTTATCCACCACATT AATCAGTGTGATTTTCTGGATTATGCCCACTATACAATTTATTTGTTGGTGTATTATTATTGCCCCATAATGTCATATTCTTTTTACTGATAATGAATTC CATTTAGAATCAATTCTTAATTGATAAAGTCTATCTTATGTTTCAACCCACTAGTCAAAAAACGGTCCATTGAGAATTTTGGTTTATTTCATCATTCT
• Tissue: pods
• Gene name: LI_gene_185339;
• Additional information: details;

Expression of Ll_transcript_380472

FPKM

• PAB: 3.8
• PNAB: 5.7
• PS1: 1.5
• PS2: 1.9
• PS3: 5.5
• PW1: 3.8
• PW2: 2.3
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380472

• Blastp: Uncharacterized protein At1g04910 from Arabidopsis with 43.06% of identity
• Blastx: Uncharacterized protein At1g04910 from Arabidopsis with 43.06% of identity
• Eggnog: DUF246 domain-containing protein(ENOG410Z25U)
• Kegg: Link to kegg annotations (AT1G04910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451847.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;