Ll_transcript_380198

• Id Trinity: TRINITY_DN51495_c1_g2_i6
• Name Transcript: Ll_transcript_380198
• Sequence: TCTGCCTTAAATTTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCAGACTAAGTCACATTACCCAAAAATGTCTATCTCCACCGCTAACTCT TTCATTCTCACCAAATCCTTATTCTCTCCCACCCAACTCAACCAATCACCTTCTTCTTCCATTCTTACCAACACCACCAGGCCCAGGCCCAAATCTTCAA TTCTCGCCGTCCATTCCGCCGAGCCCGCCAAGAACCCCGTCGTTTCCGAAAAGCCCATCAAGCCATCGGCTTCTTCTCCTCCCGCTTCCACCAGAAATGT GGGACAAGTGAAGTGGGCCATTGACAGCTGGAAAACTAAGAAGGCTCTTCAGCTTCCTGAGTACCCGAGCCAGGAGGATCTTGACTCTGTACTCCGGACC CTGGATGCTTTTCCGCCTATCGTCTTCGCCGGAGAGGCAAGGACGTTGGAGGACCGTCTCGGCGAGGCTGCAATGGGAAATGCTTTTCTATTGCAAGGTG GAGATTGCGCTGAGAGCTTTAAGGAGTTTAATGCTAATAATATTCGTGATACCTTTAGAATCATTCTTCAGATGGGTGTTGTTATGATGTTTGGTGGTCA AATGCCAGTTATCAAGGTGGGAAGAATGGCGGGTCAGTTTGCGAAGCCGAGATCTGATGGATTTGAGGAGAAGGACGGTGTGAAGCTGCCGAGTTACAGA GGGGACAACATAAATGGAGATGCTTTTGATGAGAAATCGAGGATTCCTGATCCTCAGAGGATGATTAGAGCTTATTGTCAAGCGGCAGCTACTCTCAATC TCCTGAGGTCTTTCGCCACAGGAGGGTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACAGATCACAGTGAGCAGGGAGACAGGTACCG AGAGCTTGCTCACCGAGTCGATGAGGCCCTTGGATTCATGGGGGCTGCTGGACTCACGGTGGACCATCCCATTATGAAAACAACTGAATTCTGGACTTCT CATGAATGCTTGTTATTGCCATATGAACAATCACTCACTAGGCTGGATTCAACATCTGGTCTCTACTATGACTGCTCTGCCCATATGCTTTGGGTTGGTG AACGGACCAGGCAGCTGGATGGTGCCCATGTTGAATTTCTAAGAGGAGTTGCTAACCCCCTCGGAATTAAGGTAAGTGATAAGATGGATCCAAAAGAGCT TGTTAGACTCATAGAGATCTTGAATCCTCAAAACAAAGCAGGGAGAATAACTATAATAACGAGGATGGGAGCTGAAAACATGAGAGTGAAGCTTCCACAT CTAATCAGGGCAGTGCGTGGAGCAGGGCAAATTGTCACATGGGTCAGTGATCCTATGCATGGAAACACCATCAAGGCTCCATGTGGTCTCAAAACACGCC CCTTCGATGCCATCATGGTATGTAATTTTTTCAACTCTCCCGCACATGATTTGCCGATCCCACCTAGTGGGAATAAGGCTCGGTCGTTGTTGTTGTCGTC TCTTCTGATTGTTTATAAATGTTTGCCACATAGTTTTAAATATGTACATGTTTGGATTAAAATCAGCCTTTAGTTATTGTCCTCTTCCTTCATAGAAAAT AAAATGAATTTAATTCTGCTGCTAGTCATAAACTAAAAATCTTAGGAGGAAGAACGTGCCTTTCTCAAACTTATATTCTCAATGGCTTTTGAATTGGTCT TTGATGGTAGGCTATATTATATTTAGAATCCCTGGAGTGGTAGGTGGAAAAGGGGTTGGTTGTAGAAGTAGGTGAATTTGTGAAGTATTCAAATCATGAA ATCATTGTTTGGCTCTTTGGTTAGTAAGAAATGTCATTGTTGGATCTGGTTGCATTTCTTTATCAGTTGGTGGGATTGGACACGTTTTGGGCCCACATGC TTGTGCATCTTTATTCGTGCCAACTTTAAGAAAGAAACATATAAATAATATCATACAACTTTTTTCTTTCATTGGTAATTAGAACTTTGTAAGTTTATTG GGATAAAACGTTTCCCACGAGTTACAATTATTGATGCCAACCACTTTTGTTCACTGAATTGAACAGGCTGAGGTGAGAGCATTCTTCGATGTGCATGAAC AAGAAGGAAGCCACCCAGGAGGAGTTCACCTAGAGATGACAGGCCAGAATGTGAC
• Tissue: pods
• Gene name: LI_gene_185346;
• Additional information: details;

Expression of Ll_transcript_380198

FPKM

• PAB: 0.5
• PNAB: 3.7
• PS1: 1.4
• PS2: 0.4
• PS3: 0.8
• PW1: 1.3
• PW2: 0.9
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_380198

• Blastp: Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic from Lycopersicon with 78.83% of identity
• Blastx: Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic from Lycopersicon with 78.4% of identity
• Eggnog: phospho-2-dehydro-3-deoxyheptonate aldolase(COG3200)
• Kegg: Link to kegg annotations (544153)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430963.1)
• Pfam: Class-II DAHP synthetase family (PF01474.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;