| Id Trinity | TRINITY_DN51496_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_381505 |
| Sequence | AAAAAATCCAGGGTGCCTCACTCCAACATAGCACCGTCACTGCTGTTGGGCCCAGTACCTTAAAATACACGTTAGGATTAGGGTTTATAAAGTGAATTGA AGAAAGTGAGAGAGGTAGAGAGAAGAAGAAGATGGGAAGAAGAACACAGAGAGGACAAGGTTCCCTGAAACAAACACTTCGCCGTCGATTGGAATTGTTT GAAACCAAACACTCCTCCGTCGATGACATCGTTAACCACCTTCGTTCGAAGTATCCCGATTACGGAAGACAAAAACGACAAACCTTAGCTCTCCTCGTTC GCCAAGCCATTAACAACGATGACGATGATATTAACCGAAGTGCGTTGCGGAAGAGGATGCGGTCATCAGAATCGTCTTCGTCGGCGAGTGATGAAGAAGA AGACGATGATCAATCGGTGTCTACGTCGGAGGATGCTGTTGATCTGATGAAAACGATGTTGAGGAATTCGTACAAGAGCGAGGAGGAGAAGAATGAGGAG AAGAACGATAAATTGGACGTGGAATTGGAGGTTGCGAGTAGTAGCAAAGCTACTGCTGCAATCACAAATGATGGCGGTGAAGGACGGCCTCCTCGGAAGT CGAAAAATGACAGCAGGGTTGCGCCGGAGGTGAAAGGGAAGAAGGAAGGACCAATGTTTAAGGATTTAGGAGGAATGAAAGAAGTTTTGGAGGAATTGAA AATGGAAGTGATAGTGCCATTGTGTCATCCACAGGTGCCTAGGCAGTTAGGAGTGAGACCAATGTTTAAGGATTTAGGAGGAATGAAAGAAGTTTTGGAG GAATTGAAAATGGAAGTGATAGTGCCATTGTGTCATCCACAGGTGCCTAGGCAGTTAGGAGTGAGACCAATGGCTGGGATTTTGTTGCATGGACCGCCGG GATGTGGAAAGACTAAACTAGCCCATGCCATTGCCAATGAGACTTCTCTTCCGTTTTATCAGATTTCAGCCACTGAACTGGTTTCTGGAGTATCAGGTGC ATCTGAAGAAAATATCAGAGAGCTTTTCTCCAAAGCATACAGGACTGCACCATCCATTGTATTTATTGACGAGATTGATGCAATTGCTTCAAAAAGAGAA AACTTACAACGGGAGATGGAGAAGCGAATTGTGACACAGTTGATGTCTTGCATGGATCAATCAAGCAGGCTTATGCAACCAGCTGAGAATTCAGAAAGTT CTGATGACCGCCCTGGCTATGTGCTTGTAATTGGAGCTACAAATAGGCCTGATGCGGTTGATCCTGCCATCAGAAGACCTGGTCGGTTTGATCGTGAGAT TGTTGTTGGCATTCCTGATGAATCTGCAAGGGAGGAAATACTTTCAGTGCTTACCCGCAACCTTAAGCTTGACGGTTCATTTGACTTACAAAAAATAGCC AGATCTACGCCAGGGTTTGTTGGTGCTGATTTAGCAGCTCTAGCTAACAAGGCTGGTAATCTAGCAATGAAGAGAATTATTGATGAAAGAAAACATGATC TTATGAGTGATCATACTGAAGATTGGTGGAGGGAACCTTGGCTGCCTGAAGAAATCGATAAACTTGCCATTAAAATGTCTGATTTTGAGGTGCTCTCGAT TTATGTTAATTCTTTTGGGTTTTTTCTCAGACATGTGTCCCATAATAAATTAATAATATCGTATCTATCATATGTATTGTTGATACCAATTTATCTTGTT ATTTATGCAGGAGGCAGTAAAAATGGTGCAACCTTCGTCAAGAAGAGAAGGGTTCTCTTCCATTCCTAATGTAAAATGGGAAGATGTTGGTGGGCTTGAT GTTCTGAGACAGGAGTTTGATCGCTACATAGTTAGGCGTATAAAATATCCTGAGGATTATGAGGGGTTTGGGGTGAATCTCGAGACTGGGTTTTTGCTTT ATGGACCTCCAGGCTGTGGTAAAACACTAATTGCCAAAGCTGTTGCCAACGAGGCAGGCGCTAATTTCATTCATATTAAGGGGCCTGAACTTTTAAATAA ATACGTTGGAGAAAGTGAATTAGCTGTTCGAACATTGTTTAGTCGTGCAAGGACATGTTCCCCCTGTGTCCTCTTTTTTGATGAGGTGGATGCTTTGACA ACCAAACGTGGTAAAGAAGGTGGATGGGTAATCGAACGACTATTGAACCAGTTGCTTATTGAGTTAGATGGTGCGGACCAGCGACAAGGTGTTTTTGTTA TTGGTGCTACAAATAGGCCTGAGGTGATGGACCGTGCTGTCTTACGACCCGGGAGGTTTGGCAAACTTCTTTATGTTCCTCTGCCAAGTGCTGATGAACG GGTTTTGATATTGAAAGCTCTTGCACGGAAGAAGCCTATTGATGGTAGCGTGGACTTGAGTGCCATAGCAAGAATGGAAGCTTGTGAAAATCTCAGTGGC GCCGACCTCTCTGCATTGATAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_185358; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_381505
| Blastp | Cell division control protein 48 homolog C from Arabidopsis with 46.46% of identity |
|---|---|
| Blastx | Cell division control protein 48 homolog C from Arabidopsis with 74.48% of identity |
| Eggnog | Aaa atpase(COG0464) |
| Kegg | Link to kegg annotations (AT3G01610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426069.1) |
| Pfam | Holliday junction DNA helicase ruvB N-terminus (PF05496.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |