| Id Trinity | TRINITY_DN51503_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_300256 |
| Sequence | TAACATTCTAACTTCACTTACTACATTCCTATAAAAAACACAACATTATTAAAACTCACTTAGATTCTCAAACTCATATTTATATTCTCTCTCCCTCTCT TTCTCTCTCCTCACTCTGACTTCTCTTCTTCTATTCTCTCTCTAAAATAGAAAGAAGAAGAAGAAGATGAGTATGTACGGAAGAGACCCATGGGGTGGTG CATTGGAGATTAACGCCGCCACTGACTCCGCCACCGACGACGACCGCAGCCGCAACCTCCAAGACCTGGACAGAGCTGCACTGTCTCGACCACTGGATGA GACACAACAGAGTTGGCTGCTAGGACCATCAGAGCAGAAGAAGAAGAAGTATGTTGATCTTGGCTGCATCATTGTTAGCCGAAAGATCTTTGTTTGGACC ATTGGGACTCTTCTCTTTGCTGCTTTTGTTGCTGGTTTTGTTACTCTTATTGTCAAGACTGTTCCACGTCATCACCATAAGAACCCTCCTCCTGATAATT ATACTCTTGCTCTTCATAAGGCTCTTATGTTCTTCAATGCTCAAAGATCCGGAAAATTGCCTAGGCATAATAACGTGTCATGGAGAGGTAATTCTGGTAT GCAAGATGGGAAGTCCGCAGGTGTCTCATCTGCCATTAAAGATCTGGTGGGTGGATTTTATGATGCTGGCGATGCAATCAAGTTCAACTTCCCTCAAGCT TATGCCATGACCATGTTGAGCTGGAGTGTGATTGAATACAGTGCTAAATATGAAGCTGCTGGCGAGCTCGCACATGTTAAGGAGTTAATTAAATGGGGAT CAGATTACTTCCTCAAGACCTTCAATAGTACTGCTGATTCCATTTCTACCCTTGCTGCACAGGTTGGGTCAGGAGATACTTCTGGAGGGAGTACAACTCC AAATGATCACTACTGCTGGATGCGTCCCGAGGACATCGATTATGATCGACCTGTAACCGAATGTCACAGTTGTTCTGATCTTGCTGCAGAAATGGCAGCT GCCTTAGCATCTGCATCCATAGTTTTCAAGGACAACAAGGTCTATTCGAAGAAACTTGTTCATGGTGCCACAACGCTCTTTAAGTTTTCAAGGGATCAGA GAGGCCGATATAGTGCAGGCAGTTCAGAAGCTTCTGTTTTCTACAACTCCACTAGCTACTGGGATGAGTTTGTTTGGGGAGGGGCTTGGATGTATTATGC CACCGGAAATTCTTCATACCTTAAACTTGCTACTACTCCTGGCATAGCCAAGCATGCTGGTGCCTTCTGGGGAGGACCTGATTATGGTGTATTTAGCTGG GATAACAAGCTTGCCGGTGCTCAGGTAATTTTGTAGAGATTCTTTGCTATAACATGATCGGGTTGACTCATTTGTTGTTTGTATATTAACTAATGTCAAC AACAACAACAGCAGAAGGAAGTTATAGTACTTTAAGCTTACTTTTCTTGACTCCTCCGGCTTTCATGCATTACTGCTTTGCACACATGTTTCCCGTGATT ATATGCAAAATCGGTGTTCATAGATGTTTATGAACAATGGGGATGGATCAGTTTATATTGGCATAAGAGTTAACATACTTATACCACCCAATAACTGTTT TAACTATCCAAGACATTGATGATTTATGTGAAGTCTTGAAAAAAGTTGAACATCAATAAGAATGGAATCAAGTGAGGAATGTTTTCTCCATAGTTTTACC TTTCTCATCATTTGTCTTCAATGTTTTCTCTCTTGGCCTCCTGTGGATGTTTCCTTTCGAGCGGATTTAAATATCAGGTGACTAATTTGATATTGTATTC ACGAGTTTAGGTTCTCCTGAGTCGTTTGAGGTTGTTCTTGAGTCCCGGGTATCCATATGAAGAAATTTTAAGGACCTTTCACAATCAGACCAGCATTGTC ATGTGCTCCTACCTTCCTGTTTTCACAAGCTTCAACAGAACCAAGGGAGGTTTGATTCAATTAAACCATGGCAGGCCACAGCCTCTCCAATATGTTGTGA ATGCCGCCTTTTTGGCTGCCCTATACAGTGACTATCTCGATGCTGCTGATACACCTGGATGGTATTGTGGACCAAATTTCTTTTCAACCGATGTTCTCCG TAACTTTGCCAAGACCCAGATCAATTACATCCTTGGGAACAACCCCCGGAAAATGAGCTATGTTGTAGGTTTTGGTAATAAATATCCTAAACATGTCCAC CATAGAGGTGCATCAATACCAAAGAATAAGGTTAAGTATAACTGTAAAGGTGGATGGAAATGGAGGGACTCATCAAAGCCAAATCCAAATACTATTGTTG GCGCCATGGTTGCTGGTCCTGACAAGCATGATGGTTTCCATGACGTGCGGTCAAACTACAACTACACAGAGCCAACTCTTGCTGGAAATGCTGGTTTAGT AGCATCACTAGTAGCATTATCAGGTGACAAAGGCATGAAGATTGACAAAAACACAATTTTCTCTGCCGTTCCGCCAATGTTTCCTACGCCTCCACCACCT CCGGCAGCATGGAAACCATAAGGCGTTGTCTCGTTTGCTATATTTTTCCAGCAAGTATAAAAAATGACTCGAGTTCATTGGTAAATTTTCCGCATTTTAT TTCAACTGGAAGATCAAGTTAGTTTCGAAGACAATGGCATGGAGCAGATGGAAGTAATGGAAAGTGGCCTGCCTGTAGTTGGGATCGTTTCAATGGTGAC TCAAGATTAGCATTAAGAATTGATAAAGTGGTTCTTGAGAGTGTTTCAATTTTTGTGTGTTAGACATAGTGTATATGCAGCAAAATCAAATCTTTTATTC TTTAATCATGACAACTGAACAGCTTGTATTTGTTAGATAGTTTCATCTAATTTCTTACAATTTTACTCAACTTATTCTTTCCTTTTACCTTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_185408; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300256
| Blastp | Endoglucanase 25 from Arabidopsis with 82.34% of identity |
|---|---|
| Blastx | Endoglucanase 25 from Arabidopsis with 80% of identity |
| Eggnog | endoglucanase(ENOG410XP0H) |
| Kegg | Link to kegg annotations (AT5G49720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419096.1) |
| Pfam | Glycosyl hydrolase family 9 (PF00759.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |