Ll_transcript_298021

• Id Trinity: TRINITY_DN51508_c1_g2_i7
• Name Transcript: Ll_transcript_298021
• Sequence: AGCTCCGTTTGATCTCCCAGAAGCGGAAGCTGAATTAGTTGCAGGCTATAATGTAGAATATGCGCGGGATGCGATCCTTAATTTAATATATATATAATAG TCCACTGTTGGCGGAAGCCAATGTCCCGGGGTCCCGGGGACTCATTCTGACTGAAACAAGGGGTGGGTCTTTACCAACTTAAAAATATAAGATTTTAGGT AAGCCAAAAAACGTGAGCGCCCCTACGCGAGCCTTATTGAAAAGGCCCCTTACTATAGAACAAAGCAAGGGATTGAGCTGAAAAAAAGAAAGCCTCCATT ACTATTACTAATAAAGGGCTGCATCCGTTTTCTTGCTCGTTAGCGCTCCTTAGCACAAGCACTAAGTCAGAAACCTACCTTATTGAAAACTCAAGTAAAG CTATATATATGTATTATATTAATGCGCTCAAGCATGCGAAGAAAGCAAGAAGCGAGAACAGCCCTTTCTATGTTATTAGTAAAGAGCTGTTCTTGCTTGT TTAGTAAAGTCACGCTTTTAATTTTGATAGGAGTAGGTGCTTGCTGGGGCAGGGCACTCTTCATTCTTCATTCGAAACTAAACTAATGAATGTCGGGTCG GGGCTTTCTGCCTTGTTATCAAAAAGGGAGTTGGGTAAAGCAAACTCCCTCCCTGGACGAGCACGGGGCTTAGTCAAGTAGAACCGGGTTGCGTTGCTTG ATGCTCCGATCGAAAAGAAATCAGTGGGGCCATGCCGGTACGACTGAATATGCGTTAAAAAGGTCAATCCCTCCCCTACGACACCAAAAAAAACCGGGCC GAACTTCTAACAGCCCGCCCGCTTCCATAGAACAATATCGTGGCAACGTAGACCTAAGTGGTCATATTGGATCTTTGGGAACCATCACAAGTGCGGCCGG CCTATCTTTAAACGAGAATGCCGTGTCGTCCAGCGGAGCCTAGAAGAAGGTGACTCGCGCAGACAGCTGACTCCTTCTTTTCAATAGAAAGGAATAGCCA AACCAACCCAGCTGGCTGGTCAATCTCAGAAATCTTATCGGCCGGCAAACCGGAGACGGACGACCACGGTCCCGACCTTATCAGCACCGGAGGTGTACTA ATCAATGAACCCACCCCCGAAACCTACTTTATTTTCTGACAAAATAAACCAAGCCTAACCGGTCACGACATGTTGTTGATATTGATTGAGTTTGAGGGAC TTTCGCTGACTAAATCCATCCATAAACCTAGACCCCGGCTACTTTCGTAACCAAAGCGTCAAGACAACAGCCAAAGGTTACCTTTGGATTCTTAAGTAGG GGGCAAAGAGGAGCACGTAGGAATGCCGACCACTACATAAGCCACTGGTGGCTGAGAGAAAGCGAGCAGCACCTTGTATAGGTTGGGCGGAGCTTGAAGA AGCGAGCCCCTATAAGAGAAAGCCATTGCTAGCTAGCCTAGCTAGCTAGCGTTTTTCAGCTGGCTGTTATGTTAGTTGTAGCGCGCCTTCCCTCCTTCTC TAACTTCGGAAAGATGTCGCAGTCTTTTCTTATGATGACCTGGTCGAGAGAGTACGATACATCGGTGTAAAAGATTGAGTGGGATCTGTGAGGTTGGTTA TAGTAAGCCGGAAAGTTTTCTTGCCTCTATCATTGAAGGAAAGGTTGGTCAACAATTTTGAGAGTTTGCTTCTACACGGAAACGAATACTTTCGAGAACA AATATTAAACCGGGAAGAAAAAAGGGGAAAAAGTAAATAAAGTCTAAGCGCATATGGCACGAAAAGGAAATCCGATTTCGGTAAGACTCGATCTGAATCG TAGTTCAGATTCAAGTTGGTTTAGTGATTATTATTATGGTAAATTAGTGTATCAAGATGTCAATCTGAGATCTTATTTAGGTTCGATACGTCCACCTGCG AGACTCACCTTTGGCTTTCGTCTCGGTAGGTGTATTCTTATAAATTTTCCCAAAAGAACATTCATTCATTTCTTTCTTCCCCGTCGACCACGACGACTGA AACGACGCGAAAAATCCAGACCCGGAAAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCGATCGGGTGTCTTCATTCCAGCGACAATACAGA AGAAGAACGAAACGAAGTGAGAGGCCGGAGGGCAGGGAAAAGAGTCGAGTCGATCAGGCTCGACGCCATTAAGCAAAAAGATGAGAAGCAAAACGAAATT TTGATTTGGCCGAAAAAGAAGCAACGCTATGGATACCATGACCGATCACCATCGATAAAGAAGAATCTTTCTAAATTACTTCGGGTCAGCGGGGCCTTCA AGCATCCGAAAGACGCCGGGGTTGTAAATGACATAGCGTTCCTGATAGAAAATGACGACTCCTTCAGAAAAAGTACGTTTTTAAAGTTATTTTTCCCCAA GAAGTCCCGCAGTCATCTATTTAAAAGGACCCTCCCTGCAGTGCGCCCCTCCTTGAATTATTTGGTCATGCAATACTTATTGAATAGAAAGAACATAATT CATTTCGACCCCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCAAATGCGCAGGGAAGAAGCTTAGATA AGAGAATACGTTCTCGCATAGCTTTTTTTGTAGAAAGCTTGACCAGCGAGAAAAAGTCTTTGGCCGAAGCCAAAAAGAGGTTGACCCACTTCATTCGCTT GGCGAATGATCTTCGCTTCGCGGGAACAACAAAAACCACCATCTCGCTCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCTAAGGGATAGAGTTGGGATG TATAATCACCTTTTTTTTGAGGATGCCCGGGAACCACTCCTAGGTCAATTAAGGAGAAAATGTTGGAACCTCATGGGTAAGGATAAGGTAATGGAATTGA TAGATAAATTCATAGACCTAGGTAGGATAGGAGAATGGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTACGGGTA CAACTCTTATTTGAACGAAGTGAAAAAAATGCGATCTTTGTTGTCTAATAGAACAAAGACTAATACCTTAATTGAGTCGGTCAAGATCAAATCTGTTTAT CAAAGTGCTTCTCTGATTGCTCAAGACATCTCTTTTCAACTTAGAAAGAAAACAAGATCATTTCGTTCCATTTTAAGTAGAATAGTGAAGGATATTCCAT TAGTAATGAAAAAAGGGGTTGAGGGGATCCGTATATGTTGTTCAGGTCGATTAGAAGGCGCAGAAATAGCAAGAACTGAATGCGGAAAGTATGGAAAAAC ATCTTGTAATGTATTTAACCAGAAAATCGATTATGCTTCTGCGGAAGTATCTACTCGTTACGGAATCTTAGGTGTCAAAGTGTGGATTTCATATAGTAAA AAAAAAAAGGGACGTGCTATATCCGAAACGTACGAAATATAGTAAATATCGTAAAGGCAGATGTAGTAGGGGTTGCAAACCAGACGGAACAAAACTTGGT TTTGGAAGATATGGCATTCAAAGTTGTAGAGCTGGTCGTCTTTCATATCGAGCCATTGAAGCAGCGCGTCGGGCTATAATCGGACACTTCCATCGTGCTA TGAGCGGACAATTCCGAAAAAATGGTAAGATATGGGTAAGAGTTTTCGCAGATATCCCTATTACCGGGAAACCTACAGAAGTAAGAATGGGAAGAGGAAA AGGAAATCCTACGGGTTGGATTGCTCGTGTGTCCACGGGACAAGTCCTATTTGAAATGGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTA GCGGCGCATAAACTATGTTTGTCAACCAAGTTTGTTCAGTGGTCGTAACGTAATTGGTTAGTGGGGAAAAACCGGGCCGGGATTCGGATTCAAAAGAATT AGGCGAAGGGTTTGTTCCTGAACGAGGGAAGTGGAAAGACACTAAGGGATAGGGATATACTCCTTTTTTAATCGCCGAAATTGTACGACTCAGGCG
• Tissue: pods
• Gene name: LI_gene_185437;
• Additional information: details;

Expression of Ll_transcript_298021

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_298021

• Blastp: Ribosomal protein S3, mitochondrial from Petunia with 88.71% of identity
• Blastx: Ribosomal protein S3, mitochondrial from Petunia with 88.54% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (YP_009237618.1)
• Pfam: Ribosomal protein S3, C-terminal domain (PF00189.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;