| Id Trinity | TRINITY_DN51509_c0_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_300600 |
| Sequence | ATGCTAAGAAGTTGAAGATATGGTGAGTGATGAATGATGATGTTAATAGTTGTTGTTTATATTGTGGTGATGAATGATGATGTCTTTTGATTAGTAGGAA ACATGCATTAAGATGGATGAATCTTATCGCGAAGAGGTAGCTTAGTTGGTAGAGTTGTAGAACATAAAGTGTTAAAAACTTCGCCTATCGAAGGAAAAAA ATTGATGAATGTTTGAATTTTTTGTTATGATAGTTAAGCTTTTACTTTGAGGTTTGTAGGTGTCTGCTATCTGTTTTAGATTGTGGTGATTTTGTCTCTT TAATGAGTTGTGAACATGATTTAGGGTGTGTTTGGAAATTCGTGTAGAGGGCTTATGTGGGTATATGGAAATATATCATAAGAATAGCTTATTTCAATAA GGTTGGTTTTTCATTGTGGTGATCTTATCTCTGGATTAGTAGAAAATACAATTGAAGATGAGTGTTTGAAATCATATATAAATGTAAAAATAGTATATTT TAAGCTGACATGTTTTTATGGCTATTTTCACTATAATAGATGAATTAAGTGCTGGGTTTTTAAGATCATATCACGTAGGTAAAAGAGAGTAAGTTCAATA TAATTATCTCTGATTATTCCATGTGGTGTTTTTTATCTGAATAATTTTGTGTTGTGGTTCCTTGATAAACGTTTGTGGATTTGGGTGGTCAAGGAACTGT ATTCATGACTGTTATGGATTGATGTTGATATTAAGCTATTTGGTTTTCTAGGATGGGGAAGAGAAAAATGAATGAAAGTGACAGTGATTATTCCAGTGGA GAAGAGAATGATGATGAGGGGGTAAAAGAGAAATCTGTTATATTAAATAGCCAGAATGAGTCGGACTCAAACAAGGATGAAGGAAGTTCAGGTTCTGTGA CTGATAATAAGCAGCAGGGTGTAGACTCTTCAGGTGCAGGCTCATGTGAAAGTGGATCCGAAGAAGAGAAAAAAACTGTTGTAGAAGTCAAAGCGGAATC TATTGGACCACAAAGTGCTGATACTGATCAGGTGGAACTGGGTAATGCTGTAGAGCCTGTGTTATGTGATGAGATGGTGAAGCCTGCAGCTGTGGTTTAT TCAGAGTCGGTAGTTTCCGGATTTAGTGCTGAAGATAACGGACATCATGATGCCAATGGGATTGTCTCTGACAAGCTTGATGGATCACTAAGTCTAGCCT CAAATATTACAGGCTCAGAAAATGTGAATGGTGCAATCAAATGTATGGAAGTTGTTCGTGAGAATAAAACATCCGTAAATGAAGAAACCTCACCAAGCAT TCCAACATTGGAGGAGCCTTTGAATTTTGATGCTTTTAGTTCAGCTGCAGAACTTGAGGTTCTTGGCATGGAAAGGTTGAAGTCTGAACTGCAATCACGT GGCTTAAAATGTGGAGGTGCTTTGCAGGAGCGTGCTGCCAGGCTTTTTCTTTTAAAATCTACCCCACTGGATAAACTTCCAAAGAAGCTGCTTGCAAAAA AATGAAAAGTACTTTGAGATGCATCTATCTCTTGAGTTTTCCCTCCTTTGTACAGTATAAGGATAATTACTATATCTTTTTCTTTAGCAGTGAAGTGTAT CTTGGGGAACAGACTAATACTTGCTTTTTCTGTTCCTTCTATTGTTCAATATTTGGAGCATATTTGCCATGACTAAAAGACAAAGGCAACTGAAAAATGT AAAACTTTGTAAGTCTTTGTGTGCTATGAACTCATGTCCTTTTGGATGTAAAATAATATTAGAATCTTTGTGTGGAGTACTGAAATTCCTTGTTACAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_185449; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300600
| Blastp | Protein SDE2 homolog from Danio with 50.65% of identity |
|---|---|
| Blastx | Protein SDE2 homolog from Danio with 55% of identity |
| Eggnog | SDE2 telomere maintenance homolog (S. pombe)(ENOG4111WBQ) |
| Kegg | Link to kegg annotations (550448) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424115.1) |
| Pfam | Telomere stability C-terminal (PF13297.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |